Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735667
Identifier: 187735667
GI number: 187735667
Start: 1408234
End: 1409232
Strand: Direct
Name: 187735667
Synonym: Amuc_1173
Alternate gene names: NA
Gene position: 1408234-1409232 (Clockwise)
Preceding gene: 187735666
Following gene: 187735668
Centisome position: 52.86
GC content: 58.36
Gene sequence:
>999_bases ATGGCATGGTGTATGGAAAGGAGGACGGGCATAGGCGGTTTTTTCGGGCTGGAATTGCCGGAGTACGGCAATTTCCCGCA ATGGCATCCCGGCAGGAGTGTAGCCGTGAATTCCGGCAGACGCGCTTTGGAATATATCCTGCGCCGCCTGGGGGATGTGC GCTGTGTCCGTGTTCCCCTGTATACATGCCGGACGGTGGTGGAAACGATGGAACGGCTTGGCATTCCCGTGATTACTTAC CGCATTGACGAACGCCTGGAACCGGAGGAACTGCCGGAATTGGAAAAGGGGGAATACCTTTTGTACACCAATTACTTCGG AATCAAGGAGAAATGCGTGGACCGTCTGGCTTCCCGGTATGGCGGCAGCCTGATTGTGGACAATGCGCTGGCCCTGTATT CTCCGGCCCGTTCCGGAGTGGCCTCCCTGTACAGCCCGCGAAAGTTTTCCGGTCTTCCTGACGGGGGGATCGCCGTGATG GATGCGGAGCGGTCCTTGCCGGAACCGGAGGAGCGGGACGAATCCCTGCCTGCCGCCGCTTTTTTGCTGGAATGCCTGGA GCATGGGCAGGAAAGGGCTTCCGCCGCCTGTGAACGGAATGAACGGCGCTTGCGGAATACCCCGCTGCGAAGGGTTTCCC GGCTGACGGAGCGACTGATGAGCGGCATTGATTATGAACAGGCGCGGCTGCTCCGCATGAATCATTTCCTTTTTCTTCAT GAAAGGCTGGGCCATTTGAACCGTCTTTCCGTGGAGGCGGATTCCTTGTCCGCTCCGTGTTATTATCCGTTTTGGACAGC TTTTCCCGAGCTGAGGAACGTGCTGATTGATAAGCGCGTTCTGATGCCTCTCCTGTGGCCGGAGGTATTGGAACAGGCCC CTGCCGGCAGCCTGGAACGGAAACTGGCGCTGCATCTTCTGCCGCTTCCTGTGGACCAGCGCTGCGGGCCGCAGGACATG GAACGCATCGCCCGGATTGTGGAGGCATTCTATTCCTGA
Upstream 100 bases:
>100_bases CGCGCCCTCTCCGGTCCGTGTTCCGGCGGCTTTTCCGACGGACTGATGCAGGAGGGGATTCCGTACCAGATGGCGCTTTT CTTTAAAGGGGAGATGTAGT
Downstream 100 bases:
>100_bases AGAGAAGGGAGGATTATTTTGTTAGACAGTTGGATAAGACGTTGACGATACGTGAATGAATGTTCTAACATTTTTGGTAT GTCCGACTGCCTTTCCTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MAWCMERRTGIGGFFGLELPEYGNFPQWHPGRSVAVNSGRRALEYILRRLGDVRCVRVPLYTCRTVVETMERLGIPVITY RIDERLEPEELPELEKGEYLLYTNYFGIKEKCVDRLASRYGGSLIVDNALALYSPARSGVASLYSPRKFSGLPDGGIAVM DAERSLPEPEERDESLPAAAFLLECLEHGQERASAACERNERRLRNTPLRRVSRLTERLMSGIDYEQARLLRMNHFLFLH ERLGHLNRLSVEADSLSAPCYYPFWTAFPELRNVLIDKRVLMPLLWPEVLEQAPAGSLERKLALHLLPLPVDQRCGPQDM ERIARIVEAFYS
Sequences:
>Translated_332_residues MAWCMERRTGIGGFFGLELPEYGNFPQWHPGRSVAVNSGRRALEYILRRLGDVRCVRVPLYTCRTVVETMERLGIPVITY RIDERLEPEELPELEKGEYLLYTNYFGIKEKCVDRLASRYGGSLIVDNALALYSPARSGVASLYSPRKFSGLPDGGIAVM DAERSLPEPEERDESLPAAAFLLECLEHGQERASAACERNERRLRNTPLRRVSRLTERLMSGIDYEQARLLRMNHFLFLH ERLGHLNRLSVEADSLSAPCYYPFWTAFPELRNVLIDKRVLMPLLWPEVLEQAPAGSLERKLALHLLPLPVDQRCGPQDM ERIARIVEAFYS >Mature_331_residues AWCMERRTGIGGFFGLELPEYGNFPQWHPGRSVAVNSGRRALEYILRRLGDVRCVRVPLYTCRTVVETMERLGIPVITYR IDERLEPEELPELEKGEYLLYTNYFGIKEKCVDRLASRYGGSLIVDNALALYSPARSGVASLYSPRKFSGLPDGGIAVMD AERSLPEPEERDESLPAAAFLLECLEHGQERASAACERNERRLRNTPLRRVSRLTERLMSGIDYEQARLLRMNHFLFLHE RLGHLNRLSVEADSLSAPCYYPFWTAFPELRNVLIDKRVLMPLLWPEVLEQAPAGSLERKLALHLLPLPVDQRCGPQDME RIARIVEAFYS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38025; Mature: 37894
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWCMERRTGIGGFFGLELPEYGNFPQWHPGRSVAVNSGRRALEYILRRLGDVRCVRVPL CCCHHHHCCCCCCEECCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCEEEEHHH YTCRTVVETMERLGIPVITYRIDERLEPEELPELEKGEYLLYTNYFGIKEKCVDRLASRY HHHHHHHHHHHHCCCCEEEEECCCCCCHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHH GGSLIVDNALALYSPARSGVASLYSPRKFSGLPDGGIAVMDAERSLPEPEERDESLPAAA CCCEEECCHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHCCCCHHH FLLECLEHGQERASAACERNERRLRNTPLRRVSRLTERLMSGIDYEQARLLRMNHFLFLH HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH ERLGHLNRLSVEADSLSAPCYYPFWTAFPELRNVLIDKRVLMPLLWPEVLEQAPAGSLER HHHCCHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH KLALHLLPLPVDQRCGPQDMERIARIVEAFYS HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure AWCMERRTGIGGFFGLELPEYGNFPQWHPGRSVAVNSGRRALEYILRRLGDVRCVRVPL CCHHHHCCCCCCEECCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCEEEEHHH YTCRTVVETMERLGIPVITYRIDERLEPEELPELEKGEYLLYTNYFGIKEKCVDRLASRY HHHHHHHHHHHHCCCCEEEEECCCCCCHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHH GGSLIVDNALALYSPARSGVASLYSPRKFSGLPDGGIAVMDAERSLPEPEERDESLPAAA CCCEEECCHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHCCCCHHH FLLECLEHGQERASAACERNERRLRNTPLRRVSRLTERLMSGIDYEQARLLRMNHFLFLH HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH ERLGHLNRLSVEADSLSAPCYYPFWTAFPELRNVLIDKRVLMPLLWPEVLEQAPAGSLER HHHCCHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH KLALHLLPLPVDQRCGPQDMERIARIVEAFYS HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA