Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735619
Identifier: 187735619
GI number: 187735619
Start: 1346364
End: 1347887
Strand: Reverse
Name: 187735619
Synonym: Amuc_1124
Alternate gene names: NA
Gene position: 1347887-1346364 (Counterclockwise)
Preceding gene: 187735620
Following gene: 187735618
Centisome position: 50.59
GC content: 58.6
Gene sequence:
>1524_bases ATGAGTCTGCATATTGAAAGTACTGAAAATGCCCTTGCGGAATTGAAGAAGCAGCGGACCAAGACACTAACCGCCGCCAT TTCCGTCTCCTTCCTCGGCATCGCCCTCATGGGCCTCCTCCTCTACCTGGTGCACATCATCGTGGCCGTTCCGGAAGATC CCCCCATGGTCGCCTACGCCACCCAGGAAGGCGACAACCCGGACATCGACACGCCGGAAGTTACCCAGACCACCCAGCGC CCCAGCAGTTCCTCCACCTCCGCGCAGGTGAAGGTCATCGCCGCTGTCGCCACGGCGGACGTCGCGGTGGTCAACCCGGA TATTGAGGTGGACGTCCCCTCGGAAGAACTCTCCATGGGCATCGATATCGGCGACGGCTTCGGCACCGGCACGGGCGACG GAGACGGGGGAGGCATTCCCGGCATCATCTCCAAGCGCTGCGATTTGAACGACCGCATGAAGCGCATTACGGAAAACGGG GGCACCCCGCAGTGTGAGGAAGCTGTAGTCAAATCCCTCCGCTGGCTGAAAAAACAGCAGAATAAAGACGGTTCCTGGGG CGGGGCTCCCCATAATTACAAATGCGCCATGACAGGGATGGCTCTCCTCTCCTACCTGGCCCACTGCGAAACGCCTCTTT CCGAAGAATTCGGGGAAACTGTCCTGAAGGGCATCTCTTTCCTGGTGGATCAGGGCATGAAAAATCCCGTTCTCTCCCTG GTTCCCCAGAGGAACGAAGTCAGCTATGACCACGCGGTAGCCACCTATGCCCTGTGCGAAGCCTACACCTTCTGCAAGCA GATGGACATCCCCTCTATCTCCAATCTGGAAAAAGTCGTCATAAAGGCCGTTGATAAGATTGTGGACAATCAAAATACCG ACGGCGGCTGGGCCTACAATTACAACACGAAGGCGGGCGCTCATACGGACCTTTCCGTCACCGGATGGAACGTACAGGCC CTCAAGGCCGCCGAACATGGCGGCATCCGCCCCTCCAAAGGCGAAATACGCACGGCCCTGCGCAAAGCCGCGGCCTATTG CCGGAAATGCGGCAAGCCCGACGGCCTCTTCACCTACATGCAGGAAGGCAGGGAAGACGCCGCAGCACGTCCCTCCCTGG TGGGCGTAGGCGTTCTTTCCCTTCAAATGTGCGGCAACGGTTCGGACAGCGCCGCCCGCAAGGGTCTGGACTGGATGCTT AAGAACACCAACCAGCCGTTTAACTGGAAGGCGAACAATACTTCCTCCAACCTCTACCAGCACTATTACGGGGTACAGGC CGCCATGAACCGCGGAGGAGATGTATGGAAAGCGTACAACAAGGCCTTCCGTGATTCCACCCTCGGAGCCCAGGCCACCG ATGGAAGCTTCACCCCGAACGGATTCCCGGGACCGGGGGGTCTCGTGAACAGCAATGGAGGTTCCATCAATGACAAAATT TACCGCCAGTGCCTCGCTACGCTGATGCTGGAGGTGTATTACCGCTTCCTTCCCGGCACGGGGGAAGGCACCAGGAATTC CTAA
Upstream 100 bases:
>100_bases TTCATATCTGGTCATTTACCACCCTATAAACCATCAAAATTTTTGGACTCGCCTCAACCGGGAAAACATTCTACTATCCT CAGGAAGCTTCACATATTGT
Downstream 100 bases:
>100_bases TCTGATTGACAGACAGGCGTGTCTGGCTTTAGTATGCTGCCAGCCTTGTAAACAGGCAGGCCAGCAATACATACCTGTAC AGGGCAATTCTCCCCATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 507; Mature: 506
Protein sequence:
>507_residues MSLHIESTENALAELKKQRTKTLTAAISVSFLGIALMGLLLYLVHIIVAVPEDPPMVAYATQEGDNPDIDTPEVTQTTQR PSSSSTSAQVKVIAAVATADVAVVNPDIEVDVPSEELSMGIDIGDGFGTGTGDGDGGGIPGIISKRCDLNDRMKRITENG GTPQCEEAVVKSLRWLKKQQNKDGSWGGAPHNYKCAMTGMALLSYLAHCETPLSEEFGETVLKGISFLVDQGMKNPVLSL VPQRNEVSYDHAVATYALCEAYTFCKQMDIPSISNLEKVVIKAVDKIVDNQNTDGGWAYNYNTKAGAHTDLSVTGWNVQA LKAAEHGGIRPSKGEIRTALRKAAAYCRKCGKPDGLFTYMQEGREDAAARPSLVGVGVLSLQMCGNGSDSAARKGLDWML KNTNQPFNWKANNTSSNLYQHYYGVQAAMNRGGDVWKAYNKAFRDSTLGAQATDGSFTPNGFPGPGGLVNSNGGSINDKI YRQCLATLMLEVYYRFLPGTGEGTRNS
Sequences:
>Translated_507_residues MSLHIESTENALAELKKQRTKTLTAAISVSFLGIALMGLLLYLVHIIVAVPEDPPMVAYATQEGDNPDIDTPEVTQTTQR PSSSSTSAQVKVIAAVATADVAVVNPDIEVDVPSEELSMGIDIGDGFGTGTGDGDGGGIPGIISKRCDLNDRMKRITENG GTPQCEEAVVKSLRWLKKQQNKDGSWGGAPHNYKCAMTGMALLSYLAHCETPLSEEFGETVLKGISFLVDQGMKNPVLSL VPQRNEVSYDHAVATYALCEAYTFCKQMDIPSISNLEKVVIKAVDKIVDNQNTDGGWAYNYNTKAGAHTDLSVTGWNVQA LKAAEHGGIRPSKGEIRTALRKAAAYCRKCGKPDGLFTYMQEGREDAAARPSLVGVGVLSLQMCGNGSDSAARKGLDWML KNTNQPFNWKANNTSSNLYQHYYGVQAAMNRGGDVWKAYNKAFRDSTLGAQATDGSFTPNGFPGPGGLVNSNGGSINDKI YRQCLATLMLEVYYRFLPGTGEGTRNS >Mature_506_residues SLHIESTENALAELKKQRTKTLTAAISVSFLGIALMGLLLYLVHIIVAVPEDPPMVAYATQEGDNPDIDTPEVTQTTQRP SSSSTSAQVKVIAAVATADVAVVNPDIEVDVPSEELSMGIDIGDGFGTGTGDGDGGGIPGIISKRCDLNDRMKRITENGG TPQCEEAVVKSLRWLKKQQNKDGSWGGAPHNYKCAMTGMALLSYLAHCETPLSEEFGETVLKGISFLVDQGMKNPVLSLV PQRNEVSYDHAVATYALCEAYTFCKQMDIPSISNLEKVVIKAVDKIVDNQNTDGGWAYNYNTKAGAHTDLSVTGWNVQAL KAAEHGGIRPSKGEIRTALRKAAAYCRKCGKPDGLFTYMQEGREDAAARPSLVGVGVLSLQMCGNGSDSAARKGLDWMLK NTNQPFNWKANNTSSNLYQHYYGVQAAMNRGGDVWKAYNKAFRDSTLGAQATDGSFTPNGFPGPGGLVNSNGGSINDKIY RQCLATLMLEVYYRFLPGTGEGTRNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54503; Mature: 54372
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLHIESTENALAELKKQRTKTLTAAISVSFLGIALMGLLLYLVHIIVAVPEDPPMVAYA CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE TQEGDNPDIDTPEVTQTTQRPSSSSTSAQVKVIAAVATADVAVVNPDIEVDVPSEELSMG ECCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEEEEEHHCCEEEECCCCEEECCHHHHHCC IDIGDGFGTGTGDGDGGGIPGIISKRCDLNDRMKRITENGGTPQCEEAVVKSLRWLKKQQ EECCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC NKDGSWGGAPHNYKCAMTGMALLSYLAHCETPLSEEFGETVLKGISFLVDQGMKNPVLSL CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH VPQRNEVSYDHAVATYALCEAYTFCKQMDIPSISNLEKVVIKAVDKIVDNQNTDGGWAYN CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEE YNTKAGAHTDLSVTGWNVQALKAAEHGGIRPSKGEIRTALRKAAAYCRKCGKPDGLFTYM CCCCCCCCCCEEEECCCHHEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH QEGREDAAARPSLVGVGVLSLQMCGNGSDSAARKGLDWMLKNTNQPFNWKANNTSSNLYQ HHCCHHHHCCCCEEEHHHEEEEECCCCCCHHHHHCHHHHHHCCCCCCCCCCCCCHHHHHH HYYGVQAAMNRGGDVWKAYNKAFRDSTLGAQATDGSFTPNGFPGPGGLVNSNGGSINDKI HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH YRQCLATLMLEVYYRFLPGTGEGTRNS HHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SLHIESTENALAELKKQRTKTLTAAISVSFLGIALMGLLLYLVHIIVAVPEDPPMVAYA EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE TQEGDNPDIDTPEVTQTTQRPSSSSTSAQVKVIAAVATADVAVVNPDIEVDVPSEELSMG ECCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEEEEEHHCCEEEECCCCEEECCHHHHHCC IDIGDGFGTGTGDGDGGGIPGIISKRCDLNDRMKRITENGGTPQCEEAVVKSLRWLKKQQ EECCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC NKDGSWGGAPHNYKCAMTGMALLSYLAHCETPLSEEFGETVLKGISFLVDQGMKNPVLSL CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH VPQRNEVSYDHAVATYALCEAYTFCKQMDIPSISNLEKVVIKAVDKIVDNQNTDGGWAYN CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEE YNTKAGAHTDLSVTGWNVQALKAAEHGGIRPSKGEIRTALRKAAAYCRKCGKPDGLFTYM CCCCCCCCCCEEEECCCHHEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH QEGREDAAARPSLVGVGVLSLQMCGNGSDSAARKGLDWMLKNTNQPFNWKANNTSSNLYQ HHCCHHHHCCCCEEEHHHEEEEECCCCCCHHHHHCHHHHHHCCCCCCCCCCCCCHHHHHH HYYGVQAAMNRGGDVWKAYNKAFRDSTLGAQATDGSFTPNGFPGPGGLVNSNGGSINDKI HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH YRQCLATLMLEVYYRFLPGTGEGTRNS HHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA