Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is yidJ [C]

Identifier: 187735613

GI number: 187735613

Start: 1336709

End: 1338595

Strand: Direct

Name: yidJ [C]

Synonym: Amuc_1118

Alternate gene names: 187735613

Gene position: 1336709-1338595 (Clockwise)

Preceding gene: 187735612

Following gene: 187735615

Centisome position: 50.17

GC content: 55.27

Gene sequence:

>1887_bases
ATGATTCGTTATTATTGGGGGAGGTTTTGGCCGTTCCTCCTGTTTGCGTTCGGCATTGAGGCGGTGGAAAATCTGTTTAC
GGTATTTTTCGAATACCGCAACATGGATTTCGGGTTGCTTCCCCTCCTGAAAACGGCGTACGTTTTTGTGACGGAGTTTG
CCGTCACCATGTGCTACTGGCTTATTCCCTATGCCGTTTATTTGTGGATTCTGCCGCGCGGGAAAGCAGGAGGGAAGGCG
GACAGGTGGCTCACCTCCGCATGGTTTTTCCTGTTTGTGCTCGCCAATCTGTTTGAAGATGTGGCGGAAGCCTTTTTCTG
GAACGAGTTTGAAGCCAGCTTCAATTTCATTGCGGTGGATTACCTGGTTTACACCAAGGAGGTTATCGGGAATATTTACG
AGTCCTATCCCATCATTCCTATTCTGGGCGGCATTCTGGCGGCGTCCGTTCTGGCCGCCTGGGGAATGAAGAGGTTCCTG
CTTCCCAGGAACGGGGCGGTTCCCGCCGGATGGAAACGGGGCTGTGTGGTGCTGTTCCTGCTGGCCTGCGTCACGGGGGG
ATATTGGCTGGTGGATATCAAGGATGCGGATGCCGTGAACAACCGTTATAATTCGGAAATGGCCAAGGATGGCCTTTACA
GCCTGTTCAGCGCCTTTCTCAAGAATGAACTGGATTACCGCGCTTATTACCGGACGCTGCCGGATGCGGAAGCGGCGGCG
TTTCTGGCCCGGGAGTTCACGGCGGATGACACGTCCGTGCCGGAGGCTTCGTCCGGCAGCGTAAAGAGGCAGGTGCGTCC
TTCCGAGGGGGCTATCCGCCCGAATGTCGTGGTTGTGGTCATGGAGAGCATGGGAGCGGAATTTTTGAACGAGTGCCGGG
AAGACGGGGCTGACGTCACTCCGTGCCTGAGCCGTCTGGGAAAGGAAGGCATTTTTTTCCCGAATACTTATGCCACGGGC
ACCCGTTCCGTACGCGGTCTGGAAGCAATCAGCACATCCCTGCCGCCGCTTCCCGGCATGTCCATCCTTCGCCAGGAAGG
AAACGAGCATTTGCAGACCATAGGTTCCATATTCAGGGACAAGGGATATGATCTCAAATGGATTTACGGCGGCTACGGGT
ATTTTGACAACATGAATTATTTTTTCGGGAACAACGGGTTTCAGGTTCTGGACCGTAATTCCATGGCTGATTCCGAGGTG
ACCCATTCCACCATTTGGGGCGTTTGCGATGAAGATTTGTTCCGCCGCGCCGTACGGGAGGCGGATGAATCCTGCGGACG
CGGCAAGCCGTTTTTGCAGGTGGTGTTTACCACGTCCAACCACCGCCCCTACACGTATCCGGAAGGGCGCATTGACATTC
CTTCCCACACGGGGCGCATGGGGGCCGTGAAATACGCGGATTATGCGGTAGGCGCCTTTGTGGAGGAGGCCAGAACCAAA
CCCTGGTTTGACAACACGCTGTTCGTGTTCGTAGGAGACCACGGCGCCGGGAGCGCGGGAAAGCAGGCCCTCAATCCGGA
AACGCACCGCATTTTTTCCATTTTCTACGCTCCGGCTCTGCTGAAACCGGAACGGCGGGACACTCCCGTGAGCCAGATTG
ACGTGCTGCCCACCCTGCTGGGGCTGTTGAACTGGCCGTATGATGCGGCCTTTTATGGGAAGGATGCCTTGAAGCCTTCC
TATCAATCCCGGTATTTTGTGAGCAATTACCAATATATCGGCTATTTGAAGGGGAAAGACATGGTGGTGCTCAAACCCCA
GCGCGGAGTGGAATTTTTCCGGGACGGAGAGGCCGTTGAGCCGGACGGGCGGATGAAAGAGCTGGAAAGGGAAGCGGTTT
ATTACTATCAGCACGCTTCCGGCTGGCGCACCAGTTTGAAAGAATAA

Upstream 100 bases:

>100_bases
AACCTTCTCCCGTCTCATTTCCTTGGAATGACATCCATATCACCGTGATGTTGTGATGGAGCATTGACGGCATGCTCCGG
CTGTCATATTTCCGGTAGCG

Downstream 100 bases:

>100_bases
GGCTCCGCAAGGTGCGGAGGCCGTGATTGTGGCGGCCTCCGCCCGCGCATGGAAAATGCGTTCAGGATTTGCTTCCGTCC
CTGTAATCCTGGAGAGCGTC

Product: sulfatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 628; Mature: 628

Protein sequence:

>628_residues
MIRYYWGRFWPFLLFAFGIEAVENLFTVFFEYRNMDFGLLPLLKTAYVFVTEFAVTMCYWLIPYAVYLWILPRGKAGGKA
DRWLTSAWFFLFVLANLFEDVAEAFFWNEFEASFNFIAVDYLVYTKEVIGNIYESYPIIPILGGILAASVLAAWGMKRFL
LPRNGAVPAGWKRGCVVLFLLACVTGGYWLVDIKDADAVNNRYNSEMAKDGLYSLFSAFLKNELDYRAYYRTLPDAEAAA
FLAREFTADDTSVPEASSGSVKRQVRPSEGAIRPNVVVVVMESMGAEFLNECREDGADVTPCLSRLGKEGIFFPNTYATG
TRSVRGLEAISTSLPPLPGMSILRQEGNEHLQTIGSIFRDKGYDLKWIYGGYGYFDNMNYFFGNNGFQVLDRNSMADSEV
THSTIWGVCDEDLFRRAVREADESCGRGKPFLQVVFTTSNHRPYTYPEGRIDIPSHTGRMGAVKYADYAVGAFVEEARTK
PWFDNTLFVFVGDHGAGSAGKQALNPETHRIFSIFYAPALLKPERRDTPVSQIDVLPTLLGLLNWPYDAAFYGKDALKPS
YQSRYFVSNYQYIGYLKGKDMVVLKPQRGVEFFRDGEAVEPDGRMKELEREAVYYYQHASGWRTSLKE

Sequences:

>Translated_628_residues
MIRYYWGRFWPFLLFAFGIEAVENLFTVFFEYRNMDFGLLPLLKTAYVFVTEFAVTMCYWLIPYAVYLWILPRGKAGGKA
DRWLTSAWFFLFVLANLFEDVAEAFFWNEFEASFNFIAVDYLVYTKEVIGNIYESYPIIPILGGILAASVLAAWGMKRFL
LPRNGAVPAGWKRGCVVLFLLACVTGGYWLVDIKDADAVNNRYNSEMAKDGLYSLFSAFLKNELDYRAYYRTLPDAEAAA
FLAREFTADDTSVPEASSGSVKRQVRPSEGAIRPNVVVVVMESMGAEFLNECREDGADVTPCLSRLGKEGIFFPNTYATG
TRSVRGLEAISTSLPPLPGMSILRQEGNEHLQTIGSIFRDKGYDLKWIYGGYGYFDNMNYFFGNNGFQVLDRNSMADSEV
THSTIWGVCDEDLFRRAVREADESCGRGKPFLQVVFTTSNHRPYTYPEGRIDIPSHTGRMGAVKYADYAVGAFVEEARTK
PWFDNTLFVFVGDHGAGSAGKQALNPETHRIFSIFYAPALLKPERRDTPVSQIDVLPTLLGLLNWPYDAAFYGKDALKPS
YQSRYFVSNYQYIGYLKGKDMVVLKPQRGVEFFRDGEAVEPDGRMKELEREAVYYYQHASGWRTSLKE
>Mature_628_residues
MIRYYWGRFWPFLLFAFGIEAVENLFTVFFEYRNMDFGLLPLLKTAYVFVTEFAVTMCYWLIPYAVYLWILPRGKAGGKA
DRWLTSAWFFLFVLANLFEDVAEAFFWNEFEASFNFIAVDYLVYTKEVIGNIYESYPIIPILGGILAASVLAAWGMKRFL
LPRNGAVPAGWKRGCVVLFLLACVTGGYWLVDIKDADAVNNRYNSEMAKDGLYSLFSAFLKNELDYRAYYRTLPDAEAAA
FLAREFTADDTSVPEASSGSVKRQVRPSEGAIRPNVVVVVMESMGAEFLNECREDGADVTPCLSRLGKEGIFFPNTYATG
TRSVRGLEAISTSLPPLPGMSILRQEGNEHLQTIGSIFRDKGYDLKWIYGGYGYFDNMNYFFGNNGFQVLDRNSMADSEV
THSTIWGVCDEDLFRRAVREADESCGRGKPFLQVVFTTSNHRPYTYPEGRIDIPSHTGRMGAVKYADYAVGAFVEEARTK
PWFDNTLFVFVGDHGAGSAGKQALNPETHRIFSIFYAPALLKPERRDTPVSQIDVLPTLLGLLNWPYDAAFYGKDALKPS
YQSRYFVSNYQYIGYLKGKDMVVLKPQRGVEFFRDGEAVEPDGRMKELEREAVYYYQHASGWRTSLKE

Specific function: Unknown

COG id: COG1368

COG function: function code M; Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR012160
- InterPro:   IPR000917 [H]

Pfam domain/function: PF00884 Sulfatase [H]

EC number: 3.1.6.- [C]

Molecular weight: Translated: 71291; Mature: 71291

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRYYWGRFWPFLLFAFGIEAVENLFTVFFEYRNMDFGLLPLLKTAYVFVTEFAVTMCYW
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LIPYAVYLWILPRGKAGGKADRWLTSAWFFLFVLANLFEDVAEAFFWNEFEASFNFIAVD
HHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHH
YLVYTKEVIGNIYESYPIIPILGGILAASVLAAWGMKRFLLPRNGAVPAGWKRGCVVLFL
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCHHHHHHHHH
LACVTGGYWLVDIKDADAVNNRYNSEMAKDGLYSLFSAFLKNELDYRAYYRTLPDAEAAA
HHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHH
FLAREFTADDTSVPEASSGSVKRQVRPSEGAIRPNVVVVVMESMGAEFLNECREDGADVT
HHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEHHHCCHHHHHHHHHCCCCHH
PCLSRLGKEGIFFPNTYATGTRSVRGLEAISTSLPPLPGMSILRQEGNEHLQTIGSIFRD
HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHC
KGYDLKWIYGGYGYFDNMNYFFGNNGFQVLDRNSMADSEVTHSTIWGVCDEDLFRRAVRE
CCCCEEEEECCCCEECCCCEEECCCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHH
ADESCGRGKPFLQVVFTTSNHRPYTYPEGRIDIPSHTGRMGAVKYADYAVGAFVEEARTK
HHHHCCCCCCEEEEEEEECCCCCCCCCCCCEECCCCCCCCCCEEHHHHHHHHHHHHHCCC
PWFDNTLFVFVGDHGAGSAGKQALNPETHRIFSIFYAPALLKPERRDTPVSQIDVLPTLL
CCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
GLLNWPYDAAFYGKDALKPSYQSRYFVSNYQYIGYLKGKDMVVLKPQRGVEFFRDGEAVE
HHHCCCCCHHCCCCCCCCCCCCCCEEEECCEEEEEECCCCEEEECCCCCCHHHCCCCCCC
PDGRMKELEREAVYYYQHASGWRTSLKE
CCHHHHHHHHHHHEEEECCCCCHHHCCC
>Mature Secondary Structure
MIRYYWGRFWPFLLFAFGIEAVENLFTVFFEYRNMDFGLLPLLKTAYVFVTEFAVTMCYW
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LIPYAVYLWILPRGKAGGKADRWLTSAWFFLFVLANLFEDVAEAFFWNEFEASFNFIAVD
HHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHH
YLVYTKEVIGNIYESYPIIPILGGILAASVLAAWGMKRFLLPRNGAVPAGWKRGCVVLFL
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCHHHHHHHHH
LACVTGGYWLVDIKDADAVNNRYNSEMAKDGLYSLFSAFLKNELDYRAYYRTLPDAEAAA
HHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHH
FLAREFTADDTSVPEASSGSVKRQVRPSEGAIRPNVVVVVMESMGAEFLNECREDGADVT
HHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEHHHCCHHHHHHHHHCCCCHH
PCLSRLGKEGIFFPNTYATGTRSVRGLEAISTSLPPLPGMSILRQEGNEHLQTIGSIFRD
HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHC
KGYDLKWIYGGYGYFDNMNYFFGNNGFQVLDRNSMADSEVTHSTIWGVCDEDLFRRAVRE
CCCCEEEEECCCCEECCCCEEECCCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHH
ADESCGRGKPFLQVVFTTSNHRPYTYPEGRIDIPSHTGRMGAVKYADYAVGAFVEEARTK
HHHHCCCCCCEEEEEEEECCCCCCCCCCCCEECCCCCCCCCCEEHHHHHHHHHHHHHCCC
PWFDNTLFVFVGDHGAGSAGKQALNPETHRIFSIFYAPALLKPERRDTPVSQIDVLPTLL
CCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
GLLNWPYDAAFYGKDALKPSYQSRYFVSNYQYIGYLKGKDMVVLKPQRGVEFFRDGEAVE
HHHCCCCCHHCCCCCCCCCCCCCCEEEECCEEEEEECCCCEEEECCCCCCHHHCCCCCCC
PDGRMKELEREAVYYYQHASGWRTSLKE
CCHHHHHHHHHHHEEEECCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Sulfuric ester hydrolases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]