Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735615

Identifier: 187735615

GI number: 187735615

Start: 1340007

End: 1342397

Strand: Direct

Name: 187735615

Synonym: Amuc_1120

Alternate gene names: NA

Gene position: 1340007-1342397 (Clockwise)

Preceding gene: 187735613

Following gene: 187735621

Centisome position: 50.3

GC content: 55.92

Gene sequence:

>2391_bases
ATGCATTTCCAATCTCTATATTTATCTGCCGTGGCGGTAAGTGCCGTTTCTTTCGGGTGGGGGGCTCTGGATAAGCCTTC
CGCCTCCAATTTGATCTGGTCTGATGAACCGGCCGTAGTTGTTTATCCGCAGGAAGACAAAAATTCCGAGGGCAGTTTTG
GCAAGTACAGAAAGCCTGCCTCCGTCTGGGAAGCGGAGGGGTATCCCATTGGCAATGGTCGCGTTGGAGCCATGATTTTC
AGCGCTCCCGGCCGCGAGCGGCTGGCCCTGAATGAAATCAGCCTTTGGTCCGGAGGTGCCAATCCGGGGGGAGGGTACGG
TTACGGGCCTGATGCCGGAACGAACCAGTTCGGCAACTATCTTCCCTTTGGGGATTTGTTTGTGGACTTTAAAAAAGGCG
ACCAACCGGCTTCCCTGTCTGTGGAAGATTTTACGCGCTCCCTGGATCTCCGGGACGGCATTCATAAAGTGAATTACAAG
GCGGACGGCGTAACGTATGACCGGGAGGCATTCTCCAGCACGCCTGCCAACGTCCTGGTGCTGAATTATAAAGCCAGCAA
ACCCGGCCAATTCAGCGCGGATTTTTCCGTTAACAGCCAGCTTGGAGCAGATATTTCCGCCAAGGGATCCGTCATCACCT
GGAAGGGGATGTTGAAAAACGGCATGAATTATGAAGGCCGCGTTTTGATCCGTCCCAAAGGCGGTACGCTTTCTGCCTCG
GGAGATAAAATTTCCGTGAAAAATGCGGATTCCTGCATGGTCGTCATCGCCATGGAGACGGATTACCTGATGGATTATAA
AAAGGACTGGAAGGGTGAATCTCCCTCCAGGAAGCTGGACCGTTATGCGGCCAAAGCCGCTTCTGCGGATTATGCCGCCC
TGAAACAGGCCCACATTTCCCAGTACAAGTCCATGTTTGACCGGGTGAAGGTCAACTTCGGAAAAACGGAGGAGGATGTA
GCCAAGCTGCCTACGCCAAAACGTCTGGAGGCCTATAAGAAAAATCCGGCAGACCCCGATTTGGAGGAAACCATGTTCCA
GTTTGGCCGATATCTGCTGTTGTCCAGTTCCCGGCCCGGCACGCTACCGGCCAACCTGCAAGGGTTGTGGAACGATTATG
TCAAACCGCCGTGGGCCTGCGACTACCATAACAACATCAACGTCCAGATGGCGTATTGGGGGGCGGAACCCGCCAATCTT
TCCGAATGCCATGAGGCCCTGGTCAATTATGTGGAGGCAATGGCCCCCGGCTGCCGGGACGCTTCCCAGGCGAACAAGGG
GTTCAATACCAAGGACGGTAAACCCGTGCGCGGCTGGACGGTGCGCACCTCCCAGAATATCTTCGGTGGCAACGGCTGGC
AGTGGAACATTCCCGGTGCGGCCTGGTATGCGCTGCATATATGGGAACATTATGCATTTACCGGTGATAGAAAGTATCTG
GAAAAACAGGCGTATCCCCTGATGAAGGAAATCTGTCATTTCTGGGAAGACCATTTGAAGGAACTGGGAGCCGGGGGCGA
AGGGTTCAAGACAAACGGCAAGGATCCGAGCGAAGAGGAGAAGAAGGATCTGGCCGATGTGAAAGCCGGAACTCTGGTGG
CTCCCAATGGCTGGTCTCCCGAACATGGGCCGCGTGAAGACGGTGTGATGCATGACCAGCAGCTCATTGCGGAGCTTTTC
TCCAATACCATCAAAGCCGCCCGCATTCTGGGCAAGGACGCCGCCTGGGCCAAGAGCCTGGAGGGCAAGCTGAAAAGGCT
GGCCGGCAACAAGATAGGCAAGGAAGGGAATCTTCAGGAATGGATGATTGACCGCATTCCCAAGACGGACCACCGCCATA
CGTCCCACCTTTTTGCCGTTTTCCCCGGCAACCAGATCAGCAAGCTCAAGACGCCCAAGCTGGCGGAAGCCGCCCGCCTT
TCCTTGGAATGGCGCGGCACGACCGGAGACAGCCGCCGTTCCTGGACGTGGCCGTGGCGCACGGCTCTGTGGGCCCGCCT
GGGCGAGGGGAACAAGGCTCATGAAATGGTTCAGGGACTCTTGAAATTCAACACTTTGCCGAATATGCTGACTACTCATC
CCCCTATGCAGATGGACGGCAACTTCGGCATTGTAGGCGGCATTTGTGAAATGTTGGTGCAATCCCATGCCGGGGGCCTG
GACATCATGCCCTCTCCCGTGGAAGCGTGGCCTGAAGGTTCCGTGAAAGGGCTGAAAGCCCGGGGCAACGTCACGGTGGA
TTTTTCCTGGAAGGACGGCAAGGTAAGCAACGTGAAGTTGTATTCCGCCCAACCCAAGGTGTTGCCCGTGCGCGTTAACG
GGAAGATGACCCGCATGAAAACCCTGCCGCTGAAATCGGGAGCGGGATCTTCGCAGCCCGCGGCCAGGTAA

Upstream 100 bases:

>100_bases
AATGGGGGAAAGAATCCGTCATGTGGCGGCCGATAAGTTCGGAATGGCTGAAAGATAGAGGTTGCGAAGGCAGTAAATAT
GTGACATTGTTTATTAAAGC

Downstream 100 bases:

>100_bases
AAAAGGAAATCCATAATCCAGTTTTAGTTCGGGAACTAAAAATAGTCATGGCTTCCAGTCCTTTCGTTAGGGCTGGGAGC
CTTTTTTATCCCGGACCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Glycoside Hydrolase Family; Large Secreted Protein; Fibronectin Type III Domain Protein; Twin-Arginine Translocation Pathway Signal; Glycoside Hydrolase Family Protein; Six-Hairpin Glycosidase; 1 2-Alpha-L-Fucosidase; Alpha/Beta Hydrolase Domain-Containing Protein; Alpha-Fucosidase; Fibronectin Type III Domain-Containing Protein; 1 2-A-L-Fucosidase; Ricin B Lectin; Coagulation Factor 5/8 Type Domain-Containing Protein; Glycosyl Hydrolase; F5/8 Type C Domain-Containing Protein; Candidate Alpha-L-Fucosidase; Glycosyl Hydrolase Family Protein

Number of amino acids: Translated: 796; Mature: 796

Protein sequence:

>796_residues
MHFQSLYLSAVAVSAVSFGWGALDKPSASNLIWSDEPAVVVYPQEDKNSEGSFGKYRKPASVWEAEGYPIGNGRVGAMIF
SAPGRERLALNEISLWSGGANPGGGYGYGPDAGTNQFGNYLPFGDLFVDFKKGDQPASLSVEDFTRSLDLRDGIHKVNYK
ADGVTYDREAFSSTPANVLVLNYKASKPGQFSADFSVNSQLGADISAKGSVITWKGMLKNGMNYEGRVLIRPKGGTLSAS
GDKISVKNADSCMVVIAMETDYLMDYKKDWKGESPSRKLDRYAAKAASADYAALKQAHISQYKSMFDRVKVNFGKTEEDV
AKLPTPKRLEAYKKNPADPDLEETMFQFGRYLLLSSSRPGTLPANLQGLWNDYVKPPWACDYHNNINVQMAYWGAEPANL
SECHEALVNYVEAMAPGCRDASQANKGFNTKDGKPVRGWTVRTSQNIFGGNGWQWNIPGAAWYALHIWEHYAFTGDRKYL
EKQAYPLMKEICHFWEDHLKELGAGGEGFKTNGKDPSEEEKKDLADVKAGTLVAPNGWSPEHGPREDGVMHDQQLIAELF
SNTIKAARILGKDAAWAKSLEGKLKRLAGNKIGKEGNLQEWMIDRIPKTDHRHTSHLFAVFPGNQISKLKTPKLAEAARL
SLEWRGTTGDSRRSWTWPWRTALWARLGEGNKAHEMVQGLLKFNTLPNMLTTHPPMQMDGNFGIVGGICEMLVQSHAGGL
DIMPSPVEAWPEGSVKGLKARGNVTVDFSWKDGKVSNVKLYSAQPKVLPVRVNGKMTRMKTLPLKSGAGSSQPAAR

Sequences:

>Translated_796_residues
MHFQSLYLSAVAVSAVSFGWGALDKPSASNLIWSDEPAVVVYPQEDKNSEGSFGKYRKPASVWEAEGYPIGNGRVGAMIF
SAPGRERLALNEISLWSGGANPGGGYGYGPDAGTNQFGNYLPFGDLFVDFKKGDQPASLSVEDFTRSLDLRDGIHKVNYK
ADGVTYDREAFSSTPANVLVLNYKASKPGQFSADFSVNSQLGADISAKGSVITWKGMLKNGMNYEGRVLIRPKGGTLSAS
GDKISVKNADSCMVVIAMETDYLMDYKKDWKGESPSRKLDRYAAKAASADYAALKQAHISQYKSMFDRVKVNFGKTEEDV
AKLPTPKRLEAYKKNPADPDLEETMFQFGRYLLLSSSRPGTLPANLQGLWNDYVKPPWACDYHNNINVQMAYWGAEPANL
SECHEALVNYVEAMAPGCRDASQANKGFNTKDGKPVRGWTVRTSQNIFGGNGWQWNIPGAAWYALHIWEHYAFTGDRKYL
EKQAYPLMKEICHFWEDHLKELGAGGEGFKTNGKDPSEEEKKDLADVKAGTLVAPNGWSPEHGPREDGVMHDQQLIAELF
SNTIKAARILGKDAAWAKSLEGKLKRLAGNKIGKEGNLQEWMIDRIPKTDHRHTSHLFAVFPGNQISKLKTPKLAEAARL
SLEWRGTTGDSRRSWTWPWRTALWARLGEGNKAHEMVQGLLKFNTLPNMLTTHPPMQMDGNFGIVGGICEMLVQSHAGGL
DIMPSPVEAWPEGSVKGLKARGNVTVDFSWKDGKVSNVKLYSAQPKVLPVRVNGKMTRMKTLPLKSGAGSSQPAAR
>Mature_796_residues
MHFQSLYLSAVAVSAVSFGWGALDKPSASNLIWSDEPAVVVYPQEDKNSEGSFGKYRKPASVWEAEGYPIGNGRVGAMIF
SAPGRERLALNEISLWSGGANPGGGYGYGPDAGTNQFGNYLPFGDLFVDFKKGDQPASLSVEDFTRSLDLRDGIHKVNYK
ADGVTYDREAFSSTPANVLVLNYKASKPGQFSADFSVNSQLGADISAKGSVITWKGMLKNGMNYEGRVLIRPKGGTLSAS
GDKISVKNADSCMVVIAMETDYLMDYKKDWKGESPSRKLDRYAAKAASADYAALKQAHISQYKSMFDRVKVNFGKTEEDV
AKLPTPKRLEAYKKNPADPDLEETMFQFGRYLLLSSSRPGTLPANLQGLWNDYVKPPWACDYHNNINVQMAYWGAEPANL
SECHEALVNYVEAMAPGCRDASQANKGFNTKDGKPVRGWTVRTSQNIFGGNGWQWNIPGAAWYALHIWEHYAFTGDRKYL
EKQAYPLMKEICHFWEDHLKELGAGGEGFKTNGKDPSEEEKKDLADVKAGTLVAPNGWSPEHGPREDGVMHDQQLIAELF
SNTIKAARILGKDAAWAKSLEGKLKRLAGNKIGKEGNLQEWMIDRIPKTDHRHTSHLFAVFPGNQISKLKTPKLAEAARL
SLEWRGTTGDSRRSWTWPWRTALWARLGEGNKAHEMVQGLLKFNTLPNMLTTHPPMQMDGNFGIVGGICEMLVQSHAGGL
DIMPSPVEAWPEGSVKGLKARGNVTVDFSWKDGKVSNVKLYSAQPKVLPVRVNGKMTRMKTLPLKSGAGSSQPAAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 87724; Mature: 87724

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFQSLYLSAVAVSAVSFGWGALDKPSASNLIWSDEPAVVVYPQEDKNSEGSFGKYRKPA
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCC
SVWEAEGYPIGNGRVGAMIFSAPGRERLALNEISLWSGGANPGGGYGYGPDAGTNQFGNY
CCCCCCCEECCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
LPFGDLFVDFKKGDQPASLSVEDFTRSLDLRDGIHKVNYKADGVTYDREAFSSTPANVLV
CCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEECCEECCCEEECHHHHCCCCCEEEE
LNYKASKPGQFSADFSVNSQLGADISAKGSVITWKGMLKNGMNYEGRVLIRPKGGTLSAS
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHCCCCCCCEEEEEECCCEEECC
GDKISVKNADSCMVVIAMETDYLMDYKKDWKGESPSRKLDRYAAKAASADYAALKQAHIS
CCEEEEECCCCEEEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
QYKSMFDRVKVNFGKTEEDVAKLPTPKRLEAYKKNPADPDLEETMFQFGRYLLLSSSRPG
HHHHHHHHEEECCCCCHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHCCEEEEECCCCC
TLPANLQGLWNDYVKPPWACDYHNNINVQMAYWGAEPANLSECHEALVNYVEAMAPGCRD
CCCHHHHHHHHHHCCCCEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCC
ASQANKGFNTKDGKPVRGWTVRTSQNIFGGNGWQWNIPGAAWYALHIWEHYAFTGDRKYL
HHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCEEEEEEEHHHHEECCCHHHH
EKQAYPLMKEICHFWEDHLKELGAGGEGFKTNGKDPSEEEKKDLADVKAGTLVAPNGWSP
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCC
EHGPREDGVMHDQQLIAELFSNTIKAARILGKDAAWAKSLEGKLKRLAGNKIGKEGNLQE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHH
WMIDRIPKTDHRHTSHLFAVFPGNQISKLKTPKLAEAARLSLEWRGTTGDSRRSWTWPWR
HHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHEEEEEEECCCCCCCCCCCCCHH
TALWARLGEGNKAHEMVQGLLKFNTLPNMLTTHPPMQMDGNFGIVGGICEMLVQSHAGGL
HHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHCCCCCEECCCCCHHHHHHHHHHHHCCCCC
DIMPSPVEAWPEGSVKGLKARGNVTVDFSWKDGKVSNVKLYSAQPKVLPVRVNGKMTRMK
CCCCCCHHHCCCCCCCCEEECCCEEEEEECCCCCCCEEEEEECCCCEEEEEECCCEEEEE
TLPLKSGAGSSQPAAR
ECCCCCCCCCCCCCCC
>Mature Secondary Structure
MHFQSLYLSAVAVSAVSFGWGALDKPSASNLIWSDEPAVVVYPQEDKNSEGSFGKYRKPA
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCC
SVWEAEGYPIGNGRVGAMIFSAPGRERLALNEISLWSGGANPGGGYGYGPDAGTNQFGNY
CCCCCCCEECCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
LPFGDLFVDFKKGDQPASLSVEDFTRSLDLRDGIHKVNYKADGVTYDREAFSSTPANVLV
CCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEECCEECCCEEECHHHHCCCCCEEEE
LNYKASKPGQFSADFSVNSQLGADISAKGSVITWKGMLKNGMNYEGRVLIRPKGGTLSAS
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHCCCCCCCEEEEEECCCEEECC
GDKISVKNADSCMVVIAMETDYLMDYKKDWKGESPSRKLDRYAAKAASADYAALKQAHIS
CCEEEEECCCCEEEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
QYKSMFDRVKVNFGKTEEDVAKLPTPKRLEAYKKNPADPDLEETMFQFGRYLLLSSSRPG
HHHHHHHHEEECCCCCHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHCCEEEEECCCCC
TLPANLQGLWNDYVKPPWACDYHNNINVQMAYWGAEPANLSECHEALVNYVEAMAPGCRD
CCCHHHHHHHHHHCCCCEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCC
ASQANKGFNTKDGKPVRGWTVRTSQNIFGGNGWQWNIPGAAWYALHIWEHYAFTGDRKYL
HHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCEEEEEEEHHHHEECCCHHHH
EKQAYPLMKEICHFWEDHLKELGAGGEGFKTNGKDPSEEEKKDLADVKAGTLVAPNGWSP
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCC
EHGPREDGVMHDQQLIAELFSNTIKAARILGKDAAWAKSLEGKLKRLAGNKIGKEGNLQE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHH
WMIDRIPKTDHRHTSHLFAVFPGNQISKLKTPKLAEAARLSLEWRGTTGDSRRSWTWPWR
HHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHEEEEEEECCCCCCCCCCCCCHH
TALWARLGEGNKAHEMVQGLLKFNTLPNMLTTHPPMQMDGNFGIVGGICEMLVQSHAGGL
HHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHCCCCCEECCCCCHHHHHHHHHHHHCCCCC
DIMPSPVEAWPEGSVKGLKARGNVTVDFSWKDGKVSNVKLYSAQPKVLPVRVNGKMTRMK
CCCCCCHHHCCCCCCCCEEECCCEEEEEECCCCCCCEEEEEECCCCEEEEEECCCEEEEE
TLPLKSGAGSSQPAAR
ECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA