Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735594
Identifier: 187735594
GI number: 187735594
Start: 1313362
End: 1314375
Strand: Reverse
Name: 187735594
Synonym: Amuc_1099
Alternate gene names: NA
Gene position: 1314375-1313362 (Counterclockwise)
Preceding gene: 187735595
Following gene: 187735593
Centisome position: 49.34
GC content: 50.49
Gene sequence:
>1014_bases ATGTCTGAAAAACAAAATTACGACAAAATCCTGTTGGCATCCGGAATCGTCCTGGGCCTGGGAGTGGCCGCCTATGGTAC GCTGACCTTTCTGGGACTGAATGACAAATACAAATTCACCACGCAGGTTTCTGAAAAAGCCATCGAACCGCCTCCCGGCA TCAAGAAAGCCGCAGAAGTAGGCCAGGAGCTTTCCGCCTCCCACGAACTCAAGCCGATTGCCCAGGAAACACAGAAGTAT GTGGGCTTCGTCGCCCCCAATCTCTGGATTAAGGAGGGGGGAATGGAACCCTTTGACATCATCTCCGGTCCGCCTATCCA CGGCAACATCCCGAACAAATGGTTCCTGGACAACGGACTGGAAAATGAATTCGTTTACTCGGACGTCCTGACCCGGGACC CGGACAACGATGGATTTACGGTGCAGGAGGAATATGCGGCCAAAACCCATCCCAACGACCCCAACAGCCATCCTCCCCTG GTCAGCAAACTTTTTGTCGACGAAATCAAGCAGTTCGGCTTCTACCTGGCTTTCACCCAGGCGGATGGCAATGACTTTAC CTTTAAGGGCATGAACCGCGCCAAACAGGAAATCTGGAAAAACATCGTCCAGACCAACGGCAAGTTCGGTACCCGTAAGA ATACAAAAGACGAGCCCAGATTCGAACTTGTCAGCGTTGTCAAAAAGGAATTCAAGAATCCCAGCCTGGACATGGTGGAA ACGGACGAGGAAGCCGTCGTCAAGGATTTGAAGCCGACCAAAAACGGACAAACCTACACCATCAGGCGCGGAACAAAATA CGTCATTCCAATCATTGATAAGAAAGTAAACCTTACTATCACGGCCGGCCCCGAACGGGATACCAGCTTTGAAGTAGAGG AAGGTTCCGACTTCCGGATTCCGGGAGACGCCAAACAAATCTACACGCTGAAAACCGTTGATAATGCTACACAGACCGTA ACCATTGCCAACAAAACCACTGGAGAACAAACAACACTGAGCAAGAAAAAATAG
Upstream 100 bases:
>100_bases TCCAGGTCTCCCTGAATCTGGTCCACTTCAACCAGCCCAAGGCTCAGGAACCGTCTGAAGATTAACCAAGGCAACACCAA CCGCAGCAAATACTTTCAAC
Downstream 100 bases:
>100_bases AGCCGGATTTAAACTTTTCTGAAAAAAAAGCTTCACAAATCCGAAAAACATGTAAAAAGAAGAACCTAACTATGGACCAC GCACCACTTTATCAACCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MSEKQNYDKILLASGIVLGLGVAAYGTLTFLGLNDKYKFTTQVSEKAIEPPPGIKKAAEVGQELSASHELKPIAQETQKY VGFVAPNLWIKEGGMEPFDIISGPPIHGNIPNKWFLDNGLENEFVYSDVLTRDPDNDGFTVQEEYAAKTHPNDPNSHPPL VSKLFVDEIKQFGFYLAFTQADGNDFTFKGMNRAKQEIWKNIVQTNGKFGTRKNTKDEPRFELVSVVKKEFKNPSLDMVE TDEEAVVKDLKPTKNGQTYTIRRGTKYVIPIIDKKVNLTITAGPERDTSFEVEEGSDFRIPGDAKQIYTLKTVDNATQTV TIANKTTGEQTTLSKKK
Sequences:
>Translated_337_residues MSEKQNYDKILLASGIVLGLGVAAYGTLTFLGLNDKYKFTTQVSEKAIEPPPGIKKAAEVGQELSASHELKPIAQETQKY VGFVAPNLWIKEGGMEPFDIISGPPIHGNIPNKWFLDNGLENEFVYSDVLTRDPDNDGFTVQEEYAAKTHPNDPNSHPPL VSKLFVDEIKQFGFYLAFTQADGNDFTFKGMNRAKQEIWKNIVQTNGKFGTRKNTKDEPRFELVSVVKKEFKNPSLDMVE TDEEAVVKDLKPTKNGQTYTIRRGTKYVIPIIDKKVNLTITAGPERDTSFEVEEGSDFRIPGDAKQIYTLKTVDNATQTV TIANKTTGEQTTLSKKK >Mature_336_residues SEKQNYDKILLASGIVLGLGVAAYGTLTFLGLNDKYKFTTQVSEKAIEPPPGIKKAAEVGQELSASHELKPIAQETQKYV GFVAPNLWIKEGGMEPFDIISGPPIHGNIPNKWFLDNGLENEFVYSDVLTRDPDNDGFTVQEEYAAKTHPNDPNSHPPLV SKLFVDEIKQFGFYLAFTQADGNDFTFKGMNRAKQEIWKNIVQTNGKFGTRKNTKDEPRFELVSVVKKEFKNPSLDMVET DEEAVVKDLKPTKNGQTYTIRRGTKYVIPIIDKKVNLTITAGPERDTSFEVEEGSDFRIPGDAKQIYTLKTVDNATQTVT IANKTTGEQTTLSKKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37634; Mature: 37503
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKQNYDKILLASGIVLGLGVAAYGTLTFLGLNDKYKFTTQVSEKAIEPPPGIKKAAEV CCCCCCCCEEHHHHHHHHHHHHHHHCEEEEEECCCCEEEEEHHHHHCCCCCCCHHHHHHH GQELSASHELKPIAQETQKYVGFVAPNLWIKEGGMEPFDIISGPPIHGNIPNKWFLDNGL HHHHHCCCCCCHHHHHHHHHHEEECCCEEEECCCCCHHHHCCCCCCCCCCCCCEEECCCC ENEFVYSDVLTRDPDNDGFTVQEEYAAKTHPNDPNSHPPLVSKLFVDEIKQFGFYLAFTQ CCCEEEHHHHHCCCCCCCCEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEE ADGNDFTFKGMNRAKQEIWKNIVQTNGKFGTRKNTKDEPRFELVSVVKKEFKNPSLDMVE CCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEE TDEEAVVKDLKPTKNGQTYTIRRGTKYVIPIIDKKVNLTITAGPERDTSFEVEEGSDFRI CCHHHHHHHCCCCCCCCEEEEECCCEEEEEEECCEEEEEEEECCCCCCEEEECCCCCEEC PGDAKQIYTLKTVDNATQTVTIANKTTGEQTTLSKKK CCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure SEKQNYDKILLASGIVLGLGVAAYGTLTFLGLNDKYKFTTQVSEKAIEPPPGIKKAAEV CCCCCCCEEHHHHHHHHHHHHHHHCEEEEEECCCCEEEEEHHHHHCCCCCCCHHHHHHH GQELSASHELKPIAQETQKYVGFVAPNLWIKEGGMEPFDIISGPPIHGNIPNKWFLDNGL HHHHHCCCCCCHHHHHHHHHHEEECCCEEEECCCCCHHHHCCCCCCCCCCCCCEEECCCC ENEFVYSDVLTRDPDNDGFTVQEEYAAKTHPNDPNSHPPLVSKLFVDEIKQFGFYLAFTQ CCCEEEHHHHHCCCCCCCCEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEE ADGNDFTFKGMNRAKQEIWKNIVQTNGKFGTRKNTKDEPRFELVSVVKKEFKNPSLDMVE CCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEE TDEEAVVKDLKPTKNGQTYTIRRGTKYVIPIIDKKVNLTITAGPERDTSFEVEEGSDFRI CCHHHHHHHCCCCCCCCEEEEECCCEEEEEEECCEEEEEEEECCCCCCEEEECCCCCEEC PGDAKQIYTLKTVDNATQTVTIANKTTGEQTTLSKKK CCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA