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The map label for this gene is xcpQ [H]

Identifier: 187735593

GI number: 187735593

Start: 1310567

End: 1313290

Strand: Reverse

Name: xcpQ [H]

Synonym: Amuc_1098

Alternate gene names: 187735593

Gene position: 1313290-1310567 (Counterclockwise)

Preceding gene: 187735594

Following gene: 187735592

Centisome position: 49.3

GC content: 59.36

Gene sequence:

>2724_bases
ATGGACCACGCACCACTTTATCAACCGAAGCGTTCCCTGATCGCGCTGATGGCCATTGCTGCCTCCTGCCCGTTTGCGCA
GGCTGGTGATGGCGGCGCCGTCGGAACCTCCAGTGCCTTGGGATCGTCCTACGCCGGACCGGGCAGTTACCAATACCAGT
CCAGTGCAGCGCGCACAGCCATGGCCCGCCGCGAAGCGCAAACCCAGGAAGCCATGCAGCTCCTTGCGGAAGGCCGCAAC
CTGTACCGCGAAGGCAAGTACAAGGAAGCCCTGGACAAATACAACGCCGCTTACAACATGCTGCCTTCCGCGCCGATCAA
CGACCAGCGCAAGGAAGCTATCGCCAACCATATTGGCGACGCCAGCATCGCCGTTGCTCAGGAATACATCAAAGTGGGGC
GCTATGACGAAGCCGACAAGCTTCTGCAGGATGCCATCAAGCTCAATCCCCGGAGCGCCAAGCTTGCCAAGCAAACGCTC
GAATACATGAAGGACCCGATTCGCACGAATCCGGCGCTCACCCCCGAACACGTGAAAAACGTGGAAAAGGTGAACACCCT
CCTTCACATGGCCTATGGTTACTATGACCTCGGCGACTACGACAAAGCCATCGCCGAATTCAACAAGGTTCTCTCCATCG
ACCCGTACAACGTGGCGGCCCGCCGCGGACAGGAAACGGTCAACCGCCGCAGAATGGCTTACTATGCAGCCGCTTACGAC
GAAACCCGCAGCACCATGCTGGCGGAAGTGGACAAGATGTGGGAACGCCCCATCCCGATGGAAGTCCCGACCGGAGCCGA
CGGCACTGACAACGCACCGATCACGGACATCAACGGCGCCACGGCCAATCTGATGAAGCTCAAGAGCATCATCATCCCCT
CCGTCTCTTTTGAAGACACCACCGTGGAAGACGCCATTGACTATCTGCGCAAAAAGTCCATTGAACTGGACCGCACGGTA
GGCCCGAACGGTGAACGCGGCATCAACTTTGTCATCAATGATTCCCAGCCCGCTGCCGTCGCCCCCGCCGTTCCCGCAAC
TGATGAAGACGGCTTTGGCGAAGAAACTGCGGAAGTCACGGAAGCTGCTCCGGCAGCAGCCCCGCAGGAAAGCATCCGCA
CCCGCAAAATCGGCCAGTTGAAGCTGACTAATGTTCCCATGCTGGAAGTGCTCCGTTTCATCTGCAGCAATGCCGGCCTG
CGCCAGAAGGTGGAAGACTATGCAGTGACCATCCTTCCTGCCGGCGGCAATGACGTGGATCTGTACCAGCGCACCTTCTC
CGTGCCCCCGGGCTTCCAGTCCGCTCTCCGCACCACCGTCGGCGACGGCGGCGGCGAAGTCAGTGACGACCCCTTTGGCG
GCGGTGGCGAAAGCTCCTCCGGCCTTAAGCCCATGCCCTCCATCCGCAGCCTGCTGCAAAAGAGCGGCATCAGCTTCCCG
GAAGGCGCCACGGCATTCCTTGTCAACGGCAATTCCTCCCTGGTCGTCCGCAACACTTCCGGCAACCTGGACCTGATCGA
ACAGCTCATTGAAAACACCCGCGGCGAATCCCAGCAGGTGCGCATCATGACCAAGTTCGTGGAAGTAACCCAGGAAAACA
CGGAAGAACTCGGCTTTGACTGGATTGTCACCCCGTTCTCCGTAAGCAATGACCGCAGCACCTTCCTGGGCGGCGGCACG
AACTACGGCACCGGTTCCACTTCCGACAGCTTTACCCAGTCTCCCGGCGGCGTGACCGGCTGGCCTGTAAACAGCGGCAG
CGACACCATCAACGGCCTCGTTACCGGCGGCAACCGCACGGGTGACTACGCCATCACCAAGAACTCCGTGGACAATCTGC
TGAACAGCACCAACCGCTCTGAAGCCTCCCAGAAAAACGCCGCTCCCGGCATCATGTCCCTGACGGGCATTTATGACGAA
GGCTCCTTCCAGATGCTGATGCGCGGCCTGTCCCAGAAAAAAGGCTCTGACGTCCTCACCGCCCCCAGCGTGACCGCCAA
GTCCGGTGAAACCGCCAAGATTGAAATCATCCGCGAATTCTGGTATCCCACCGAATACGAACCGCCGGAACTCCCCAACT
CCGTAGGCAACAGCGGCTATAACAACGGTTACGGTTATGGGAACAACGGTAACATCGTGGACGGCCTGCTGGGCAATCAG
ATCCAGCCCCAGATATCCAGCTTCCCCGTCACTCCCGCCACCCCCGGCGTGTTTGAAATGAAGCCCGTCGGCGTAACTCT
GGAAGTGGTGCCTACCATTGGCGACAACAAGTACATCATCGACCTGAACTTCAAGCCCAGCATCGTGGAATTTGAAGGCT
TCGTGAACTACGGCAGCCCGATCCAGTCCACCGGCGTTGGTTCCGACGGCAAGCCGATGTCCCTGACGCTGACGGAAAAC
CGCATCGAGCAGCCGATCTTCTCCAAGAGGTCCGTTGAAACGTCCCTGTTCATCTACGACGGCCATACCGTGGCAATCGG
TGGTTTGATCACGGAAAACGTGCAGACGGTGGAAGACAAAGTGCCGATCTTCGGTGACCTGCCTCTCATCGGCCGCTTCT
TCCGCAGCAACTCCGACAACCACATCAAGAAGAATCTGATGATCTTCGTAACGGGACAGATCATTGACGCCACGGGCCAG
CCCGTACGCGGCAATGCCCTTCCCACTGCGGCCGCTCCGGAAAGCGCCCTTCCCGCCTCCGAAGGCCTGCTGCCTCCCAT
GTAG

Upstream 100 bases:

>100_bases
AACAAACAACACTGAGCAAGAAAAAATAGAGCCGGATTTAAACTTTTCTGAAAAAAAAGCTTCACAAATCCGAAAAACAT
GTAAAAAGAAGAACCTAACT

Downstream 100 bases:

>100_bases
GCTGCGTGCATAACGTCCATATTGGAGCGGGTGAAAGGGTAACCCTTTCACCCGCTCTTTATATCCCAGAAGCGCCTTAC
TTTCCCTTCCCCCCATGAAA

Product: type II and III secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 907; Mature: 907

Protein sequence:

>907_residues
MDHAPLYQPKRSLIALMAIAASCPFAQAGDGGAVGTSSALGSSYAGPGSYQYQSSAARTAMARREAQTQEAMQLLAEGRN
LYREGKYKEALDKYNAAYNMLPSAPINDQRKEAIANHIGDASIAVAQEYIKVGRYDEADKLLQDAIKLNPRSAKLAKQTL
EYMKDPIRTNPALTPEHVKNVEKVNTLLHMAYGYYDLGDYDKAIAEFNKVLSIDPYNVAARRGQETVNRRRMAYYAAAYD
ETRSTMLAEVDKMWERPIPMEVPTGADGTDNAPITDINGATANLMKLKSIIIPSVSFEDTTVEDAIDYLRKKSIELDRTV
GPNGERGINFVINDSQPAAVAPAVPATDEDGFGEETAEVTEAAPAAAPQESIRTRKIGQLKLTNVPMLEVLRFICSNAGL
RQKVEDYAVTILPAGGNDVDLYQRTFSVPPGFQSALRTTVGDGGGEVSDDPFGGGGESSSGLKPMPSIRSLLQKSGISFP
EGATAFLVNGNSSLVVRNTSGNLDLIEQLIENTRGESQQVRIMTKFVEVTQENTEELGFDWIVTPFSVSNDRSTFLGGGT
NYGTGSTSDSFTQSPGGVTGWPVNSGSDTINGLVTGGNRTGDYAITKNSVDNLLNSTNRSEASQKNAAPGIMSLTGIYDE
GSFQMLMRGLSQKKGSDVLTAPSVTAKSGETAKIEIIREFWYPTEYEPPELPNSVGNSGYNNGYGYGNNGNIVDGLLGNQ
IQPQISSFPVTPATPGVFEMKPVGVTLEVVPTIGDNKYIIDLNFKPSIVEFEGFVNYGSPIQSTGVGSDGKPMSLTLTEN
RIEQPIFSKRSVETSLFIYDGHTVAIGGLITENVQTVEDKVPIFGDLPLIGRFFRSNSDNHIKKNLMIFVTGQIIDATGQ
PVRGNALPTAAAPESALPASEGLLPPM

Sequences:

>Translated_907_residues
MDHAPLYQPKRSLIALMAIAASCPFAQAGDGGAVGTSSALGSSYAGPGSYQYQSSAARTAMARREAQTQEAMQLLAEGRN
LYREGKYKEALDKYNAAYNMLPSAPINDQRKEAIANHIGDASIAVAQEYIKVGRYDEADKLLQDAIKLNPRSAKLAKQTL
EYMKDPIRTNPALTPEHVKNVEKVNTLLHMAYGYYDLGDYDKAIAEFNKVLSIDPYNVAARRGQETVNRRRMAYYAAAYD
ETRSTMLAEVDKMWERPIPMEVPTGADGTDNAPITDINGATANLMKLKSIIIPSVSFEDTTVEDAIDYLRKKSIELDRTV
GPNGERGINFVINDSQPAAVAPAVPATDEDGFGEETAEVTEAAPAAAPQESIRTRKIGQLKLTNVPMLEVLRFICSNAGL
RQKVEDYAVTILPAGGNDVDLYQRTFSVPPGFQSALRTTVGDGGGEVSDDPFGGGGESSSGLKPMPSIRSLLQKSGISFP
EGATAFLVNGNSSLVVRNTSGNLDLIEQLIENTRGESQQVRIMTKFVEVTQENTEELGFDWIVTPFSVSNDRSTFLGGGT
NYGTGSTSDSFTQSPGGVTGWPVNSGSDTINGLVTGGNRTGDYAITKNSVDNLLNSTNRSEASQKNAAPGIMSLTGIYDE
GSFQMLMRGLSQKKGSDVLTAPSVTAKSGETAKIEIIREFWYPTEYEPPELPNSVGNSGYNNGYGYGNNGNIVDGLLGNQ
IQPQISSFPVTPATPGVFEMKPVGVTLEVVPTIGDNKYIIDLNFKPSIVEFEGFVNYGSPIQSTGVGSDGKPMSLTLTEN
RIEQPIFSKRSVETSLFIYDGHTVAIGGLITENVQTVEDKVPIFGDLPLIGRFFRSNSDNHIKKNLMIFVTGQIIDATGQ
PVRGNALPTAAAPESALPASEGLLPPM
>Mature_907_residues
MDHAPLYQPKRSLIALMAIAASCPFAQAGDGGAVGTSSALGSSYAGPGSYQYQSSAARTAMARREAQTQEAMQLLAEGRN
LYREGKYKEALDKYNAAYNMLPSAPINDQRKEAIANHIGDASIAVAQEYIKVGRYDEADKLLQDAIKLNPRSAKLAKQTL
EYMKDPIRTNPALTPEHVKNVEKVNTLLHMAYGYYDLGDYDKAIAEFNKVLSIDPYNVAARRGQETVNRRRMAYYAAAYD
ETRSTMLAEVDKMWERPIPMEVPTGADGTDNAPITDINGATANLMKLKSIIIPSVSFEDTTVEDAIDYLRKKSIELDRTV
GPNGERGINFVINDSQPAAVAPAVPATDEDGFGEETAEVTEAAPAAAPQESIRTRKIGQLKLTNVPMLEVLRFICSNAGL
RQKVEDYAVTILPAGGNDVDLYQRTFSVPPGFQSALRTTVGDGGGEVSDDPFGGGGESSSGLKPMPSIRSLLQKSGISFP
EGATAFLVNGNSSLVVRNTSGNLDLIEQLIENTRGESQQVRIMTKFVEVTQENTEELGFDWIVTPFSVSNDRSTFLGGGT
NYGTGSTSDSFTQSPGGVTGWPVNSGSDTINGLVTGGNRTGDYAITKNSVDNLLNSTNRSEASQKNAAPGIMSLTGIYDE
GSFQMLMRGLSQKKGSDVLTAPSVTAKSGETAKIEIIREFWYPTEYEPPELPNSVGNSGYNNGYGYGNNGNIVDGLLGNQ
IQPQISSFPVTPATPGVFEMKPVGVTLEVVPTIGDNKYIIDLNFKPSIVEFEGFVNYGSPIQSTGVGSDGKPMSLTLTEN
RIEQPIFSKRSVETSLFIYDGHTVAIGGLITENVQTVEDKVPIFGDLPLIGRFFRSNSDNHIKKNLMIFVTGQIIDATGQ
PVRGNALPTAAAPESALPASEGLLPPM

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG1450

COG function: function code NU; Type II secretory pathway, component PulD

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP D family [H]

Homologues:

Organism=Escherichia coli, GI87082242, Length=71, Percent_Identity=38.0281690140845, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR005644
- InterPro:   IPR004846
- InterPro:   IPR013356
- InterPro:   IPR004845 [H]

Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N [H]

EC number: NA

Molecular weight: Translated: 97558; Mature: 97558

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS00800 PECTINESTERASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHAPLYQPKRSLIALMAIAASCPFAQAGDGGAVGTSSALGSSYAGPGSYQYQSSAARTA
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHH
MARREAQTQEAMQLLAEGRNLYREGKYKEALDKYNAAYNMLPSAPINDQRKEAIANHIGD
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC
ASIAVAQEYIKVGRYDEADKLLQDAIKLNPRSAKLAKQTLEYMKDPIRTNPALTPEHVKN
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
VEKVNTLLHMAYGYYDLGDYDKAIAEFNKVLSIDPYNVAARRGQETVNRRRMAYYAAAYD
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEECCCHHHHHHCCHHHHHHHHHHHHHHHHH
ETRSTMLAEVDKMWERPIPMEVPTGADGTDNAPITDINGATANLMKLKSIIIPSVSFEDT
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCC
TVEDAIDYLRKKSIELDRTVGPNGERGINFVINDSQPAAVAPAVPATDEDGFGEETAEVT
CHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEECCCCCCCCCCCCCCHHHHHH
EAAPAAAPQESIRTRKIGQLKLTNVPMLEVLRFICSNAGLRQKVEDYAVTILPAGGNDVD
HHCCCCCCHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCHHHHHCCEEEEEEECCCCCHH
LYQRTFSVPPGFQSALRTTVGDGGGEVSDDPFGGGGESSSGLKPMPSIRSLLQKSGISFP
HHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC
EGATAFLVNGNSSLVVRNTSGNLDLIEQLIENTRGESQQVRIMTKFVEVTQENTEELGFD
CCCEEEEEECCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCE
WIVTPFSVSNDRSTFLGGGTNYGTGSTSDSFTQSPGGVTGWPVNSGSDTINGLVTGGNRT
EEEECEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
GDYAITKNSVDNLLNSTNRSEASQKNAAPGIMSLTGIYDEGSFQMLMRGLSQKKGSDVLT
CCEEEEHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEE
APSVTAKSGETAKIEIIREFWYPTEYEPPELPNSVGNSGYNNGYGYGNNGNIVDGLLGNQ
CCCCCCCCCCCEEEEHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEECHHCCCC
IQPQISSFPVTPATPGVFEMKPVGVTLEVVPTIGDNKYIIDLNFKPSIVEFEGFVNYGSP
CCCHHHCCCCCCCCCCCEEEECCCEEEEEEEECCCCEEEEEECCCCCEEEEECEECCCCC
IQSTGVGSDGKPMSLTLTENRIEQPIFSKRSVETSLFIYDGHTVAIGGLITENVQTVEDK
CCCCCCCCCCCCEEEEEEHHHHCCCHHHCCCCCEEEEEECCCEEEECCCHHCCHHHHHHC
VPIFGDLPLIGRFFRSNSDNHIKKNLMIFVTGQIIDATGQPVRGNALPTAAAPESALPAS
CCCEECCHHHHHHHHCCCCCCEECCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
EGLLPPM
CCCCCCC
>Mature Secondary Structure
MDHAPLYQPKRSLIALMAIAASCPFAQAGDGGAVGTSSALGSSYAGPGSYQYQSSAARTA
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHH
MARREAQTQEAMQLLAEGRNLYREGKYKEALDKYNAAYNMLPSAPINDQRKEAIANHIGD
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC
ASIAVAQEYIKVGRYDEADKLLQDAIKLNPRSAKLAKQTLEYMKDPIRTNPALTPEHVKN
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
VEKVNTLLHMAYGYYDLGDYDKAIAEFNKVLSIDPYNVAARRGQETVNRRRMAYYAAAYD
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEECCCHHHHHHCCHHHHHHHHHHHHHHHHH
ETRSTMLAEVDKMWERPIPMEVPTGADGTDNAPITDINGATANLMKLKSIIIPSVSFEDT
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCC
TVEDAIDYLRKKSIELDRTVGPNGERGINFVINDSQPAAVAPAVPATDEDGFGEETAEVT
CHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEECCCCCCCCCCCCCCHHHHHH
EAAPAAAPQESIRTRKIGQLKLTNVPMLEVLRFICSNAGLRQKVEDYAVTILPAGGNDVD
HHCCCCCCHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCHHHHHCCEEEEEEECCCCCHH
LYQRTFSVPPGFQSALRTTVGDGGGEVSDDPFGGGGESSSGLKPMPSIRSLLQKSGISFP
HHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC
EGATAFLVNGNSSLVVRNTSGNLDLIEQLIENTRGESQQVRIMTKFVEVTQENTEELGFD
CCCEEEEEECCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCE
WIVTPFSVSNDRSTFLGGGTNYGTGSTSDSFTQSPGGVTGWPVNSGSDTINGLVTGGNRT
EEEECEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
GDYAITKNSVDNLLNSTNRSEASQKNAAPGIMSLTGIYDEGSFQMLMRGLSQKKGSDVLT
CCEEEEHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEE
APSVTAKSGETAKIEIIREFWYPTEYEPPELPNSVGNSGYNNGYGYGNNGNIVDGLLGNQ
CCCCCCCCCCCEEEEHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEECHHCCCC
IQPQISSFPVTPATPGVFEMKPVGVTLEVVPTIGDNKYIIDLNFKPSIVEFEGFVNYGSP
CCCHHHCCCCCCCCCCCEEEECCCEEEEEEEECCCCEEEEEECCCCCEEEEECEECCCCC
IQSTGVGSDGKPMSLTLTENRIEQPIFSKRSVETSLFIYDGHTVAIGGLITENVQTVEDK
CCCCCCCCCCCCEEEEEEHHHHCCCHHHCCCCCEEEEEECCCEEEECCCHHCCHHHHHHC
VPIFGDLPLIGRFFRSNSDNHIKKNLMIFVTGQIIDATGQPVRGNALPTAAAPESALPAS
CCCEECCHHHHHHHHCCCCCCEECCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
EGLLPPM
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934833; 10984043 [H]