Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735595
Identifier: 187735595
GI number: 187735595
Start: 1314411
End: 1315364
Strand: Reverse
Name: 187735595
Synonym: Amuc_1100
Alternate gene names: NA
Gene position: 1315364-1314411 (Counterclockwise)
Preceding gene: 187735596
Following gene: 187735594
Centisome position: 49.37
GC content: 56.81
Gene sequence:
>954_bases ATGAGCAATTGGATTACAGACAACAAGCCCGCCGCCATGGTCGCGGGCGTGGGACTTCTCTTATTCCTGGGGTTATCCGC GACAGGGTACATCGTCAATTCCAAACGCAGTGAACTGGACAAAAAAATCAGCATCGCCGCCAAGGAAATCAAGTCCGCCA ATGCTGCGGAAATCACTCCGAGCCGATCATCCAACGAAGAGCTGGAAAAAGAACTGAACCGCTATGCCAAGGCCGTGGGC AGCCTGGAAACGGCCTACAAGCCCTTCCTTGCCTCCTCCGCGCTGGTCCCCACCACGCCCACGGCATTCCAGAATGAACT GAAAACATTCAGGGATTCCCTGATCTCCTCCTGCAAGAAAAAGAACATTCTCATAACGGACACATCCTCCTGGCTCGGTT TCCAGGTTTACAGCACCCAGGCTCCCTCTGTTCAGGCGGCCTCCACGCTGGGTTTTGAATTGAAAGCCATCAACAGCCTG GTCAACAAACTGGCGGAATGCGGCCTGTCCAAATTCATCAAGGTGTACCGCCCCCAGCTCCCCATTGAAACCCCGGCGAA CAATCCGGAAGAATCGGACGAAGCCGACCAGGCCCCATGGACTCCCATGCCTCTGGAAATAGCCTTCCAGGGCGACCGGG AAAGTGTATTGAAAGCCATGAACGCCATAACCGGCATGCAGGACTATCTGTTCACGGTCAACTCCATCCGTATCCGCAAC GAACGGATGATGCCCCCTCCCATCGCCAATCCGGCAGCCGCCAAACCTGCCGCGGCCCAACCCGCCACGGGTGCGGCTTC CCTGACTCCGGCGGATGAGGCGGCTGCACCTGCAGCCCCGGCCATCCAGCAAGTCATCAAGCCTTACATGGGCAAGGAGC AGGTCTTTGTCCAGGTCTCCCTGAATCTGGTCCACTTCAACCAGCCCAAGGCTCAGGAACCGTCTGAAGATTAA
Upstream 100 bases:
>100_bases CAGGGGCCTTTGTACCCTTCAAGCTGGTGCTTCCGTTAAAAACGCCCATTCCCGTGAACTTTAACAAATAAGATTACCCA ACCCGAACAAGACATATTTT
Downstream 100 bases:
>100_bases CCAAGGCAACACCAACCGCAGCAAATACTTTCAACATGTCTGAAAAACAAAATTACGACAAAATCCTGTTGGCATCCGGA ATCGTCCTGGGCCTGGGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MSNWITDNKPAAMVAGVGLLLFLGLSATGYIVNSKRSELDKKISIAAKEIKSANAAEITPSRSSNEELEKELNRYAKAVG SLETAYKPFLASSALVPTTPTAFQNELKTFRDSLISSCKKKNILITDTSSWLGFQVYSTQAPSVQAASTLGFELKAINSL VNKLAECGLSKFIKVYRPQLPIETPANNPEESDEADQAPWTPMPLEIAFQGDRESVLKAMNAITGMQDYLFTVNSIRIRN ERMMPPPIANPAAAKPAAAQPATGAASLTPADEAAAPAAPAIQQVIKPYMGKEQVFVQVSLNLVHFNQPKAQEPSED
Sequences:
>Translated_317_residues MSNWITDNKPAAMVAGVGLLLFLGLSATGYIVNSKRSELDKKISIAAKEIKSANAAEITPSRSSNEELEKELNRYAKAVG SLETAYKPFLASSALVPTTPTAFQNELKTFRDSLISSCKKKNILITDTSSWLGFQVYSTQAPSVQAASTLGFELKAINSL VNKLAECGLSKFIKVYRPQLPIETPANNPEESDEADQAPWTPMPLEIAFQGDRESVLKAMNAITGMQDYLFTVNSIRIRN ERMMPPPIANPAAAKPAAAQPATGAASLTPADEAAAPAAPAIQQVIKPYMGKEQVFVQVSLNLVHFNQPKAQEPSED >Mature_316_residues SNWITDNKPAAMVAGVGLLLFLGLSATGYIVNSKRSELDKKISIAAKEIKSANAAEITPSRSSNEELEKELNRYAKAVGS LETAYKPFLASSALVPTTPTAFQNELKTFRDSLISSCKKKNILITDTSSWLGFQVYSTQAPSVQAASTLGFELKAINSLV NKLAECGLSKFIKVYRPQLPIETPANNPEESDEADQAPWTPMPLEIAFQGDRESVLKAMNAITGMQDYLFTVNSIRIRNE RMMPPPIANPAAAKPAAAQPATGAASLTPADEAAAPAAPAIQQVIKPYMGKEQVFVQVSLNLVHFNQPKAQEPSED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34213; Mature: 34082
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNWITDNKPAAMVAGVGLLLFLGLSATGYIVNSKRSELDKKISIAAKEIKSANAAEITP CCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCC SRSSNEELEKELNRYAKAVGSLETAYKPFLASSALVPTTPTAFQNELKTFRDSLISSCKK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH KNILITDTSSWLGFQVYSTQAPSVQAASTLGFELKAINSLVNKLAECGLSKFIKVYRPQL CCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PIETPANNPEESDEADQAPWTPMPLEIAFQGDRESVLKAMNAITGMQDYLFTVNSIRIRN CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEECC ERMMPPPIANPAAAKPAAAQPATGAASLTPADEAAAPAAPAIQQVIKPYMGKEQVFVQVS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCEEEEEEE LNLVHFNQPKAQEPSED EEEEECCCCCCCCCCCC >Mature Secondary Structure SNWITDNKPAAMVAGVGLLLFLGLSATGYIVNSKRSELDKKISIAAKEIKSANAAEITP CCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCC SRSSNEELEKELNRYAKAVGSLETAYKPFLASSALVPTTPTAFQNELKTFRDSLISSCKK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH KNILITDTSSWLGFQVYSTQAPSVQAASTLGFELKAINSLVNKLAECGLSKFIKVYRPQL CCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PIETPANNPEESDEADQAPWTPMPLEIAFQGDRESVLKAMNAITGMQDYLFTVNSIRIRN CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEECC ERMMPPPIANPAAAKPAAAQPATGAASLTPADEAAAPAAPAIQQVIKPYMGKEQVFVQVS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCEEEEEEE LNLVHFNQPKAQEPSED EEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA