Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is glkA [H]
Identifier: 187735589
GI number: 187735589
Start: 1305302
End: 1306300
Strand: Direct
Name: glkA [H]
Synonym: Amuc_1094
Alternate gene names: 187735589
Gene position: 1305302-1306300 (Clockwise)
Preceding gene: 187735581
Following gene: 187735590
Centisome position: 49.0
GC content: 58.26
Gene sequence:
>999_bases ATGAGCTTTTCAGAACCCTGTGCCTTGGCCGTTGATTTCGGCGGCACGAGCATCAAAATGGGCGTAACGGCGGGGGATCG TATTCTGGCGACGGCCGACCGCATCCCTACTGCCATGTTCGAAAGCCCGCAGGCAATCATTGATGCCATGATTGCGTCCG CCCGCACCCTGCGCGGACAATTCCCCTCCGCCTGTGTGATGGGCATGGGAATGCCGGGATGGTGTGATTACCAGCGGGGA GTGCTTTACCAGCTTACCAATGTGAGGGTCTGGGATAGGGAAATTCCGGTGAAAGAGATGATGGAGCAGGCCCTGGGCCT CCCCGTCGTGCTGGATAATGACGCCAACTGCATGGCTTATGCGGAATGGAAGCTTGGCGCCGGGCGCGGCATGTCCAGCC TGGTGTGCCTGACGATGGGAACGGGGATAGGCGGGGGAATCGTGGTGCATGACCGCATGCTGCGGGGAAGGCGGCTTTCC GCTGCGGAACTGGGCCAGACCAGCATTCATTACCAGGGGAAAACGGGACCGTTCGGCAGCCGGGGAGCCATTGAGGAATA CATCGGCAACAACGAACTGGCGGCGGAGGCGGTTAAACGGTATGCCGGGGCGGGAATCATCAAGACGGTGGATGAATGCA CGCCCAGGCATCTGGACGAGGCTGCCCGGTCCGGATGTCCTATAGCCCTTCAATTATGGGAAGATACGGCGGAAATGCTG GGCTGCCTGATCATGAACCTGATGTATACGCTGGTGCCGGACGCCTTCATCATCGGGGGCGGTGTGGCCAAGGCAGGGGA TTTGTTGATGAAGCCGCTGCTGGAGAACCTCAGGAAACAGTTGTTTCCTCTCCTGATGGAGGATTTGAAAATTCTGCCTG CCAGATTTGGAGCGGAGGCGGGGTTGCTGGGAGCGGGAGCCATGGCGATGGATGAATTCATGGGGCTGGGGATTTTGGAA CGGTTTAAGAACCAGAAATCAACGCAGACTTTTTGTTAG
Upstream 100 bases:
>100_bases TATTGTGTTTTATACGGTAAGTGCGCCATGCCGCGGAAAGGGGTGGGGATGAATGCGTTTTTACGTTGATTCCGGAGAAT GGGTGGCATAAGTATGGACT
Downstream 100 bases:
>100_bases TTTGGGCTAATATAGGGCTTGCCATGCCGGAGAGGCAGGCGTACAAGCGGAACAGGTCATGAGCACGGAACATTCCCACG AACATTTTCCGGAAGGTGCT
Product: ROK family protein
Products: NA
Alternate protein names: Glucose kinase [H]
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MSFSEPCALAVDFGGTSIKMGVTAGDRILATADRIPTAMFESPQAIIDAMIASARTLRGQFPSACVMGMGMPGWCDYQRG VLYQLTNVRVWDREIPVKEMMEQALGLPVVLDNDANCMAYAEWKLGAGRGMSSLVCLTMGTGIGGGIVVHDRMLRGRRLS AAELGQTSIHYQGKTGPFGSRGAIEEYIGNNELAAEAVKRYAGAGIIKTVDECTPRHLDEAARSGCPIALQLWEDTAEML GCLIMNLMYTLVPDAFIIGGGVAKAGDLLMKPLLENLRKQLFPLLMEDLKILPARFGAEAGLLGAGAMAMDEFMGLGILE RFKNQKSTQTFC
Sequences:
>Translated_332_residues MSFSEPCALAVDFGGTSIKMGVTAGDRILATADRIPTAMFESPQAIIDAMIASARTLRGQFPSACVMGMGMPGWCDYQRG VLYQLTNVRVWDREIPVKEMMEQALGLPVVLDNDANCMAYAEWKLGAGRGMSSLVCLTMGTGIGGGIVVHDRMLRGRRLS AAELGQTSIHYQGKTGPFGSRGAIEEYIGNNELAAEAVKRYAGAGIIKTVDECTPRHLDEAARSGCPIALQLWEDTAEML GCLIMNLMYTLVPDAFIIGGGVAKAGDLLMKPLLENLRKQLFPLLMEDLKILPARFGAEAGLLGAGAMAMDEFMGLGILE RFKNQKSTQTFC >Mature_331_residues SFSEPCALAVDFGGTSIKMGVTAGDRILATADRIPTAMFESPQAIIDAMIASARTLRGQFPSACVMGMGMPGWCDYQRGV LYQLTNVRVWDREIPVKEMMEQALGLPVVLDNDANCMAYAEWKLGAGRGMSSLVCLTMGTGIGGGIVVHDRMLRGRRLSA AELGQTSIHYQGKTGPFGSRGAIEEYIGNNELAAEAVKRYAGAGIIKTVDECTPRHLDEAARSGCPIALQLWEDTAEMLG CLIMNLMYTLVPDAFIIGGGVAKAGDLLMKPLLENLRKQLFPLLMEDLKILPARFGAEAGLLGAGAMAMDEFMGLGILER FKNQKSTQTFC
Specific function: Required for glucose repression of many different genes [H]
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
Organism=Homo sapiens, GI190014632, Length=316, Percent_Identity=28.4810126582279, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI4885285, Length=316, Percent_Identity=28.4810126582279, Blast_Score=85, Evalue=8e-17, Organism=Homo sapiens, GI298566315, Length=313, Percent_Identity=28.1150159744409, Blast_Score=85, Evalue=9e-17, Organism=Homo sapiens, GI298566325, Length=313, Percent_Identity=28.1150159744409, Blast_Score=85, Evalue=9e-17, Organism=Escherichia coli, GI1787363, Length=315, Percent_Identity=26.6666666666667, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1787878, Length=259, Percent_Identity=22.007722007722, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI87081733, Length=318, Percent_Identity=26.1006289308176, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 - InterPro: IPR004654 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: =2.7.1.2 [H]
Molecular weight: Translated: 35758; Mature: 35627
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFSEPCALAVDFGGTSIKMGVTAGDRILATADRIPTAMFESPQAIIDAMIASARTLRGQ CCCCCCCEEEEECCCCEEEEECCCCCCEEEEHHHCCHHHHCCHHHHHHHHHHHHHHHHCC FPSACVMGMGMPGWCDYQRGVLYQLTNVRVWDREIPVKEMMEQALGLPVVLDNDANCMAY CCCHHHHCCCCCCCCCCCCCCEEEECCEEEECCCCCHHHHHHHHCCCCEEECCCCCEEEE AEWKLGAGRGMSSLVCLTMGTGIGGGIVVHDRMLRGRRLSAAELGQTSIHYQGKTGPFGS EEEECCCCCCHHHEEEEEECCCCCCCEEEEHHHHCCCCCCHHHCCCCEEEECCCCCCCCC RGAIEEYIGNNELAAEAVKRYAGAGIIKTVDECTPRHLDEAARSGCPIALQLWEDTAEML CCCHHHHHCCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHCCCCEEEEHHHHHHHHH GCLIMNLMYTLVPDAFIIGGGVAKAGDLLMKPLLENLRKQLFPLLMEDLKILPARFGAEA HHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GLLGAGAMAMDEFMGLGILERFKNQKSTQTFC CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SFSEPCALAVDFGGTSIKMGVTAGDRILATADRIPTAMFESPQAIIDAMIASARTLRGQ CCCCCCEEEEECCCCEEEEECCCCCCEEEEHHHCCHHHHCCHHHHHHHHHHHHHHHHCC FPSACVMGMGMPGWCDYQRGVLYQLTNVRVWDREIPVKEMMEQALGLPVVLDNDANCMAY CCCHHHHCCCCCCCCCCCCCCEEEECCEEEECCCCCHHHHHHHHCCCCEEECCCCCEEEE AEWKLGAGRGMSSLVCLTMGTGIGGGIVVHDRMLRGRRLSAAELGQTSIHYQGKTGPFGS EEEECCCCCCHHHEEEEEECCCCCCCEEEEHHHHCCCCCCHHHCCCCEEEECCCCCCCCC RGAIEEYIGNNELAAEAVKRYAGAGIIKTVDECTPRHLDEAARSGCPIALQLWEDTAEML CCCHHHHHCCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHCCCCEEEEHHHHHHHHH GCLIMNLMYTLVPDAFIIGGGVAKAGDLLMKPLLENLRKQLFPLLMEDLKILPARFGAEA HHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GLLGAGAMAMDEFMGLGILERFKNQKSTQTFC CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1435260; 12000953 [H]