Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735581

Identifier: 187735581

GI number: 187735581

Start: 1298356

End: 1298763

Strand: Direct

Name: 187735581

Synonym: Amuc_1086

Alternate gene names: NA

Gene position: 1298356-1298763 (Clockwise)

Preceding gene: 187735580

Following gene: 187735589

Centisome position: 48.74

GC content: 53.92

Gene sequence:

>408_bases
ATGAGTAAGGTTCAATGGGAAATTTCAAATGATGAAGTGACCGACCGTGATACTGCTCTGCGCCGCTTGCAGGAAGGAAC
GACCGGCCACGTGGTGTGCGCCCGCGACGGCGCGTGCCTCCAGTCTTATAAGGAAGCGGATGGCGTGTACCATTGCGAAA
TTGTATTCAAGACGGATTCCTGCTGCCCGCCGGTATTCGCCGCCCCGGAAGGGGTGACGGGAAAGGAGCTGGAAATGCTT
TACGATCGTTTTGCCAATGGGGACGATTTTTCCTTTGTGGAAAAGGAATGGGAACCTCTGATGGCCGTGGAATACCGCCA
TCGCCACAATGTGATGTGGTTCATCTTCCTGTTCATTGCGCTGGTAATTGCGGCCATGGCGGCATATCAGCACGGTTGGA
TTGAGTGA

Upstream 100 bases:

>100_bases
TTTTGCCACGCCGGAAGATGGATGGGAGCCGCAACGTTTCCGGGGGCCGAAGCGTTTAAAACCATATTGACTTAAACGGG
AATTATCTTAAACTGACAGA

Downstream 100 bases:

>100_bases
CAGGGTAGAGGCTGGCTGCGGCAGGCGCCGTAGCAGAAAAACCTGCAAACCGTAGAAAATGGTTTGCAGGTTCTGGATGG
GATAACCGGGGCCGGGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MSKVQWEISNDEVTDRDTALRRLQEGTTGHVVCARDGACLQSYKEADGVYHCEIVFKTDSCCPPVFAAPEGVTGKELEML
YDRFANGDDFSFVEKEWEPLMAVEYRHRHNVMWFIFLFIALVIAAMAAYQHGWIE

Sequences:

>Translated_135_residues
MSKVQWEISNDEVTDRDTALRRLQEGTTGHVVCARDGACLQSYKEADGVYHCEIVFKTDSCCPPVFAAPEGVTGKELEML
YDRFANGDDFSFVEKEWEPLMAVEYRHRHNVMWFIFLFIALVIAAMAAYQHGWIE
>Mature_134_residues
SKVQWEISNDEVTDRDTALRRLQEGTTGHVVCARDGACLQSYKEADGVYHCEIVFKTDSCCPPVFAAPEGVTGKELEMLY
DRFANGDDFSFVEKEWEPLMAVEYRHRHNVMWFIFLFIALVIAAMAAYQHGWIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15502; Mature: 15370

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVQWEISNDEVTDRDTALRRLQEGTTGHVVCARDGACLQSYKEADGVYHCEIVFKTDS
CCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCEEEEEEEEECCC
CCPPVFAAPEGVTGKELEMLYDRFANGDDFSFVEKEWEPLMAVEYRHRHNVMWFIFLFIA
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHCCHHHHHHHHHH
LVIAAMAAYQHGWIE
HHHHHHHHHHCCCCC
>Mature Secondary Structure 
SKVQWEISNDEVTDRDTALRRLQEGTTGHVVCARDGACLQSYKEADGVYHCEIVFKTDS
CCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCEEEEEEEEECCC
CCPPVFAAPEGVTGKELEMLYDRFANGDDFSFVEKEWEPLMAVEYRHRHNVMWFIFLFIA
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHCCHHHHHHHHHH
LVIAAMAAYQHGWIE
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA