Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735560

Identifier: 187735560

GI number: 187735560

Start: 1272008

End: 1272652

Strand: Reverse

Name: 187735560

Synonym: Amuc_1065

Alternate gene names: NA

Gene position: 1272652-1272008 (Counterclockwise)

Preceding gene: 187735562

Following gene: 187735559

Centisome position: 47.77

GC content: 60.31

Gene sequence:

>645_bases
ATGCTATTCGCAGTAGTGATTTTCCTTTCCGTGGTCGTGCTCGGTGTCATTGCCGCGCTGCGTTTCACCAAAGGCATCAT
TCCCCTGCGCACCTACGAATCCCGGGAACTGCCCGGTTTCCCCGGCCCGGCTGGATTAATCCACCGCCTGGACGGTGCGG
AAAAACGCCAGCGGAAACTGGAGAAAGCCCGGTTTCCCGGAGTGGATGAAAACGGATTCATCAGCCTTCCTCCGGCATGG
GAAGGCAAGGTGACCGCAGGCCGGCTGGCCTGCGTAGCCCATACCTGGGCCATGAGCAGCCTGGTCCGGGAAGACCCGGA
GGCGGCAAAAGCCCGCAAAACCGCCTCTGCGCGCGCCACGATGATTCCCTTTTTCACAGCTCTTATCCTGCTGGGAATGC
TGGCGACCGGACTGTTGAAATTCCAGATCGCGCTGGCCATCGGGCTGGCCTGCTGGGCCTTTTTCACTTTCTCCGCCCTT
CCCACCCAGTTCCGCGAATGGAAAGCGGCGGAAATAGCCAAGTCAGGGCTGAAGGAAGCCGGGCTGTGGCCCGTGCTGCC
TTCGGATGCCATGGCTGTGGAACAATGCCTGAAAGCACTGTCATGGTGCCACGTGGCAGGCTTCCGGCGTATTTTGCCCA
GATAG

Upstream 100 bases:

>100_bases
AACGATGTCCGCATCCGCACCCGGCTGTTAGCCGGGAAGGACGGCTTCATGCCAGCCGGAGAGATTGACGGACACACGGG
CATATGAGAAAAAGCCGTCT

Downstream 100 bases:

>100_bases
AGGGGGGGTCCTGGCGGTGAAGCGCATTTTTCCGGTTAAACCGGCCTTCGGGAGAAAAAAATCTTGAAACGGGGATGCGT
GTAACCCACTCTTTCACCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MLFAVVIFLSVVVLGVIAALRFTKGIIPLRTYESRELPGFPGPAGLIHRLDGAEKRQRKLEKARFPGVDENGFISLPPAW
EGKVTAGRLACVAHTWAMSSLVREDPEAAKARKTASARATMIPFFTALILLGMLATGLLKFQIALAIGLACWAFFTFSAL
PTQFREWKAAEIAKSGLKEAGLWPVLPSDAMAVEQCLKALSWCHVAGFRRILPR

Sequences:

>Translated_214_residues
MLFAVVIFLSVVVLGVIAALRFTKGIIPLRTYESRELPGFPGPAGLIHRLDGAEKRQRKLEKARFPGVDENGFISLPPAW
EGKVTAGRLACVAHTWAMSSLVREDPEAAKARKTASARATMIPFFTALILLGMLATGLLKFQIALAIGLACWAFFTFSAL
PTQFREWKAAEIAKSGLKEAGLWPVLPSDAMAVEQCLKALSWCHVAGFRRILPR
>Mature_214_residues
MLFAVVIFLSVVVLGVIAALRFTKGIIPLRTYESRELPGFPGPAGLIHRLDGAEKRQRKLEKARFPGVDENGFISLPPAW
EGKVTAGRLACVAHTWAMSSLVREDPEAAKARKTASARATMIPFFTALILLGMLATGLLKFQIALAIGLACWAFFTFSAL
PTQFREWKAAEIAKSGLKEAGLWPVLPSDAMAVEQCLKALSWCHVAGFRRILPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23390; Mature: 23390

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFAVVIFLSVVVLGVIAALRFTKGIIPLRTYESRELPGFPGPAGLIHRLDGAEKRQRKL
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH
EKARFPGVDENGFISLPPAWEGKVTAGRLACVAHTWAMSSLVREDPEAAKARKTASARAT
HHHCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
MIPFFTALILLGMLATGLLKFQIALAIGLACWAFFTFSALPTQFREWKAAEIAKSGLKEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLWPVLPSDAMAVEQCLKALSWCHVAGFRRILPR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLFAVVIFLSVVVLGVIAALRFTKGIIPLRTYESRELPGFPGPAGLIHRLDGAEKRQRKL
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH
EKARFPGVDENGFISLPPAWEGKVTAGRLACVAHTWAMSSLVREDPEAAKARKTASARAT
HHHCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
MIPFFTALILLGMLATGLLKFQIALAIGLACWAFFTFSALPTQFREWKAAEIAKSGLKEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLWPVLPSDAMAVEQCLKALSWCHVAGFRRILPR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA