Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735559
Identifier: 187735559
GI number: 187735559
Start: 1270394
End: 1271875
Strand: Reverse
Name: 187735559
Synonym: Amuc_1064
Alternate gene names: NA
Gene position: 1271875-1270394 (Counterclockwise)
Preceding gene: 187735560
Following gene: 187735558
Centisome position: 47.74
GC content: 55.87
Gene sequence:
>1482_bases ATGAATGAGTCCGCAAACCCCATCCTCAAATATTTTTCGGAATTCAAAATCCTGAAAACCGTATCCAAGGATTTCTGGCT TACCAACGTCGTCCAGTTCTTCGACGGAATGGCCTATTTTTCCATGATTACGGTATTCGTCCTCTACCTGACGGACTATT GTAGCTTCAACGATGCGGACGCCGCCCTCTGGGTAGGCCTGTACACCCTTTTCATCTCCGCCTTCGTCTTCGCGGTGGGT TCCATCTGCGACATCATCGGCATACGGCGCACTTACCTGATCGGCTTCATCATCCTCATTGCCGGGCGCCTTATCATGGG CTTCGGTCCGGACCTCAGCCCGACCGTGGACTCCGGAAGGCTGGCCGTCATGGCGGGCATTCTGATTATGTCCTTCGGCA CGGCGTTCATGTCCCCCGTCATCCAGACTTCCATCCGGCGCTTCACCCCGCTGAAAGCGCGTTCCACGGGCTTCAATATC TACTACCTGCTGATGAACATTTCCGCCGTCATTGCGAACGTGTTCCTGATTGAATTTTTCCGCAAGCACTTCGGCGCCGT GGACGGCGGGTACTGGATCATCAACTTCGGAACGCTGATGGTGTTGCTGGGCTGCATCACCACCCGTTTTATTAATGAAG ACAACTACGCGGAACCCAGCGAACGGGAGGCGAACATCAATGCCCCCCTCCGCAGACCTCTCCAGCTCTTCATGGAGGTA TGGAAGGAATCCGCCTTCCGCAAACTTATCCTCTTCCTGGTGCTGACCATGGGCGTGCGCATCGTTTTCACGCTGCAATT CCTGGTGATGCCCAAATACTACGTGCGGACGCTATATGACGATTTCGCCATAGGCTCCATCAATGCCGTCAACCCGGCCA TCATTGTCTCCGGCCTCATCCTGCTCATTCCGGTGCTGGGCCGCTTCTCTACCGTTGGCCTCATGATTGCGGGCATGTCC ATTTCCGCTTTCTCTCTCGTTTTCATGGCCATTCCCATTGAATGGTACTACCTGGTGCCCGGCATCGAAACGCGCTCCCA GGCGTATCTGGTAGCCATTGTGGCGCAGATCCTGGTATTCGCATTCGGGGAACTGCTCTTCTCTCCCCGCTTCTCCGAAT ATGTGGCGCGGGTAGCTCCGAAAGACAAAGTGGCTTCCTACATGTCTCTGGCGGCGCTTCCCATGTTCATCGCCAAACCC ATTAATGGCATCATCGGCGGCCTGCTCGTCGCCTACCTCTGCTATGACGGCATCTGCGCCAAGATGGATACCGGGCACAT CGGCTTCTGGGACTCCCCGGAATTCATGTGGACCATTTACCTGGCCATGGCCGTAATCAGCCCCATCGCCATTATCATGA CCCGCAGGACCATCACCTCGGACCATCCCGAGGAAGACGCGGCATCGCCACCCATCAGCGCCATTGAAGCGGAAACGGAT CCCGCCCTGACGGCGGAAGAACTTACGGAAGCCAACTCCTGA
Upstream 100 bases:
>100_bases CGGTTAAACCGGCCTTCGGGAGAAAAAAATCTTGAAACGGGGATGCGTGTAACCCACTCTTTCACCGTCGTCAACTTTTC CTTACCGCTTCCATCTCTCC
Downstream 100 bases:
>100_bases CCTTACGAGACCATGAACCAGCACACGCGCAACATCATTGTGGATTCCCTCATCCTGGTAGCTTTCAGCTCCCTCCTCGG CGGTCTCAGCCTGTTGGTCT
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: Transport-Related Membrane Protein; Permease
Number of amino acids: Translated: 493; Mature: 493
Protein sequence:
>493_residues MNESANPILKYFSEFKILKTVSKDFWLTNVVQFFDGMAYFSMITVFVLYLTDYCSFNDADAALWVGLYTLFISAFVFAVG SICDIIGIRRTYLIGFIILIAGRLIMGFGPDLSPTVDSGRLAVMAGILIMSFGTAFMSPVIQTSIRRFTPLKARSTGFNI YYLLMNISAVIANVFLIEFFRKHFGAVDGGYWIINFGTLMVLLGCITTRFINEDNYAEPSEREANINAPLRRPLQLFMEV WKESAFRKLILFLVLTMGVRIVFTLQFLVMPKYYVRTLYDDFAIGSINAVNPAIIVSGLILLIPVLGRFSTVGLMIAGMS ISAFSLVFMAIPIEWYYLVPGIETRSQAYLVAIVAQILVFAFGELLFSPRFSEYVARVAPKDKVASYMSLAALPMFIAKP INGIIGGLLVAYLCYDGICAKMDTGHIGFWDSPEFMWTIYLAMAVISPIAIIMTRRTITSDHPEEDAASPPISAIEAETD PALTAEELTEANS
Sequences:
>Translated_493_residues MNESANPILKYFSEFKILKTVSKDFWLTNVVQFFDGMAYFSMITVFVLYLTDYCSFNDADAALWVGLYTLFISAFVFAVG SICDIIGIRRTYLIGFIILIAGRLIMGFGPDLSPTVDSGRLAVMAGILIMSFGTAFMSPVIQTSIRRFTPLKARSTGFNI YYLLMNISAVIANVFLIEFFRKHFGAVDGGYWIINFGTLMVLLGCITTRFINEDNYAEPSEREANINAPLRRPLQLFMEV WKESAFRKLILFLVLTMGVRIVFTLQFLVMPKYYVRTLYDDFAIGSINAVNPAIIVSGLILLIPVLGRFSTVGLMIAGMS ISAFSLVFMAIPIEWYYLVPGIETRSQAYLVAIVAQILVFAFGELLFSPRFSEYVARVAPKDKVASYMSLAALPMFIAKP INGIIGGLLVAYLCYDGICAKMDTGHIGFWDSPEFMWTIYLAMAVISPIAIIMTRRTITSDHPEEDAASPPISAIEAETD PALTAEELTEANS >Mature_493_residues MNESANPILKYFSEFKILKTVSKDFWLTNVVQFFDGMAYFSMITVFVLYLTDYCSFNDADAALWVGLYTLFISAFVFAVG SICDIIGIRRTYLIGFIILIAGRLIMGFGPDLSPTVDSGRLAVMAGILIMSFGTAFMSPVIQTSIRRFTPLKARSTGFNI YYLLMNISAVIANVFLIEFFRKHFGAVDGGYWIINFGTLMVLLGCITTRFINEDNYAEPSEREANINAPLRRPLQLFMEV WKESAFRKLILFLVLTMGVRIVFTLQFLVMPKYYVRTLYDDFAIGSINAVNPAIIVSGLILLIPVLGRFSTVGLMIAGMS ISAFSLVFMAIPIEWYYLVPGIETRSQAYLVAIVAQILVFAFGELLFSPRFSEYVARVAPKDKVASYMSLAALPMFIAKP INGIIGGLLVAYLCYDGICAKMDTGHIGFWDSPEFMWTIYLAMAVISPIAIIMTRRTITSDHPEEDAASPPISAIEAETD PALTAEELTEANS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54907; Mature: 54907
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNESANPILKYFSEFKILKTVSKDFWLTNVVQFFDGMAYFSMITVFVLYLTDYCSFNDAD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH AALWVGLYTLFISAFVFAVGSICDIIGIRRTYLIGFIILIAGRLIMGFGPDLSPTVDSGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH LAVMAGILIMSFGTAFMSPVIQTSIRRFTPLKARSTGFNIYYLLMNISAVIANVFLIEFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RKHFGAVDGGYWIINFGTLMVLLGCITTRFINEDNYAEPSEREANINAPLRRPLQLFMEV HHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH WKESAFRKLILFLVLTMGVRIVFTLQFLVMPKYYVRTLYDDFAIGSINAVNPAIIVSGLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LLIPVLGRFSTVGLMIAGMSISAFSLVFMAIPIEWYYLVPGIETRSQAYLVAIVAQILVF HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHH AFGELLFSPRFSEYVARVAPKDKVASYMSLAALPMFIAKPINGIIGGLLVAYLCYDGICA HHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH KMDTGHIGFWDSPEFMWTIYLAMAVISPIAIIMTRRTITSDHPEEDAASPPISAIEAETD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCC PALTAEELTEANS CCCCHHHHHCCCC >Mature Secondary Structure MNESANPILKYFSEFKILKTVSKDFWLTNVVQFFDGMAYFSMITVFVLYLTDYCSFNDAD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH AALWVGLYTLFISAFVFAVGSICDIIGIRRTYLIGFIILIAGRLIMGFGPDLSPTVDSGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH LAVMAGILIMSFGTAFMSPVIQTSIRRFTPLKARSTGFNIYYLLMNISAVIANVFLIEFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RKHFGAVDGGYWIINFGTLMVLLGCITTRFINEDNYAEPSEREANINAPLRRPLQLFMEV HHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH WKESAFRKLILFLVLTMGVRIVFTLQFLVMPKYYVRTLYDDFAIGSINAVNPAIIVSGLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LLIPVLGRFSTVGLMIAGMSISAFSLVFMAIPIEWYYLVPGIETRSQAYLVAIVAQILVF HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHH AFGELLFSPRFSEYVARVAPKDKVASYMSLAALPMFIAKPINGIIGGLLVAYLCYDGICA HHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH KMDTGHIGFWDSPEFMWTIYLAMAVISPIAIIMTRRTITSDHPEEDAASPPISAIEAETD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCC PALTAEELTEANS CCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA