Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735559

Identifier: 187735559

GI number: 187735559

Start: 1270394

End: 1271875

Strand: Reverse

Name: 187735559

Synonym: Amuc_1064

Alternate gene names: NA

Gene position: 1271875-1270394 (Counterclockwise)

Preceding gene: 187735560

Following gene: 187735558

Centisome position: 47.74

GC content: 55.87

Gene sequence:

>1482_bases
ATGAATGAGTCCGCAAACCCCATCCTCAAATATTTTTCGGAATTCAAAATCCTGAAAACCGTATCCAAGGATTTCTGGCT
TACCAACGTCGTCCAGTTCTTCGACGGAATGGCCTATTTTTCCATGATTACGGTATTCGTCCTCTACCTGACGGACTATT
GTAGCTTCAACGATGCGGACGCCGCCCTCTGGGTAGGCCTGTACACCCTTTTCATCTCCGCCTTCGTCTTCGCGGTGGGT
TCCATCTGCGACATCATCGGCATACGGCGCACTTACCTGATCGGCTTCATCATCCTCATTGCCGGGCGCCTTATCATGGG
CTTCGGTCCGGACCTCAGCCCGACCGTGGACTCCGGAAGGCTGGCCGTCATGGCGGGCATTCTGATTATGTCCTTCGGCA
CGGCGTTCATGTCCCCCGTCATCCAGACTTCCATCCGGCGCTTCACCCCGCTGAAAGCGCGTTCCACGGGCTTCAATATC
TACTACCTGCTGATGAACATTTCCGCCGTCATTGCGAACGTGTTCCTGATTGAATTTTTCCGCAAGCACTTCGGCGCCGT
GGACGGCGGGTACTGGATCATCAACTTCGGAACGCTGATGGTGTTGCTGGGCTGCATCACCACCCGTTTTATTAATGAAG
ACAACTACGCGGAACCCAGCGAACGGGAGGCGAACATCAATGCCCCCCTCCGCAGACCTCTCCAGCTCTTCATGGAGGTA
TGGAAGGAATCCGCCTTCCGCAAACTTATCCTCTTCCTGGTGCTGACCATGGGCGTGCGCATCGTTTTCACGCTGCAATT
CCTGGTGATGCCCAAATACTACGTGCGGACGCTATATGACGATTTCGCCATAGGCTCCATCAATGCCGTCAACCCGGCCA
TCATTGTCTCCGGCCTCATCCTGCTCATTCCGGTGCTGGGCCGCTTCTCTACCGTTGGCCTCATGATTGCGGGCATGTCC
ATTTCCGCTTTCTCTCTCGTTTTCATGGCCATTCCCATTGAATGGTACTACCTGGTGCCCGGCATCGAAACGCGCTCCCA
GGCGTATCTGGTAGCCATTGTGGCGCAGATCCTGGTATTCGCATTCGGGGAACTGCTCTTCTCTCCCCGCTTCTCCGAAT
ATGTGGCGCGGGTAGCTCCGAAAGACAAAGTGGCTTCCTACATGTCTCTGGCGGCGCTTCCCATGTTCATCGCCAAACCC
ATTAATGGCATCATCGGCGGCCTGCTCGTCGCCTACCTCTGCTATGACGGCATCTGCGCCAAGATGGATACCGGGCACAT
CGGCTTCTGGGACTCCCCGGAATTCATGTGGACCATTTACCTGGCCATGGCCGTAATCAGCCCCATCGCCATTATCATGA
CCCGCAGGACCATCACCTCGGACCATCCCGAGGAAGACGCGGCATCGCCACCCATCAGCGCCATTGAAGCGGAAACGGAT
CCCGCCCTGACGGCGGAAGAACTTACGGAAGCCAACTCCTGA

Upstream 100 bases:

>100_bases
CGGTTAAACCGGCCTTCGGGAGAAAAAAATCTTGAAACGGGGATGCGTGTAACCCACTCTTTCACCGTCGTCAACTTTTC
CTTACCGCTTCCATCTCTCC

Downstream 100 bases:

>100_bases
CCTTACGAGACCATGAACCAGCACACGCGCAACATCATTGTGGATTCCCTCATCCTGGTAGCTTTCAGCTCCCTCCTCGG
CGGTCTCAGCCTGTTGGTCT

Product: major facilitator superfamily MFS_1

Products: NA

Alternate protein names: Transport-Related Membrane Protein; Permease

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MNESANPILKYFSEFKILKTVSKDFWLTNVVQFFDGMAYFSMITVFVLYLTDYCSFNDADAALWVGLYTLFISAFVFAVG
SICDIIGIRRTYLIGFIILIAGRLIMGFGPDLSPTVDSGRLAVMAGILIMSFGTAFMSPVIQTSIRRFTPLKARSTGFNI
YYLLMNISAVIANVFLIEFFRKHFGAVDGGYWIINFGTLMVLLGCITTRFINEDNYAEPSEREANINAPLRRPLQLFMEV
WKESAFRKLILFLVLTMGVRIVFTLQFLVMPKYYVRTLYDDFAIGSINAVNPAIIVSGLILLIPVLGRFSTVGLMIAGMS
ISAFSLVFMAIPIEWYYLVPGIETRSQAYLVAIVAQILVFAFGELLFSPRFSEYVARVAPKDKVASYMSLAALPMFIAKP
INGIIGGLLVAYLCYDGICAKMDTGHIGFWDSPEFMWTIYLAMAVISPIAIIMTRRTITSDHPEEDAASPPISAIEAETD
PALTAEELTEANS

Sequences:

>Translated_493_residues
MNESANPILKYFSEFKILKTVSKDFWLTNVVQFFDGMAYFSMITVFVLYLTDYCSFNDADAALWVGLYTLFISAFVFAVG
SICDIIGIRRTYLIGFIILIAGRLIMGFGPDLSPTVDSGRLAVMAGILIMSFGTAFMSPVIQTSIRRFTPLKARSTGFNI
YYLLMNISAVIANVFLIEFFRKHFGAVDGGYWIINFGTLMVLLGCITTRFINEDNYAEPSEREANINAPLRRPLQLFMEV
WKESAFRKLILFLVLTMGVRIVFTLQFLVMPKYYVRTLYDDFAIGSINAVNPAIIVSGLILLIPVLGRFSTVGLMIAGMS
ISAFSLVFMAIPIEWYYLVPGIETRSQAYLVAIVAQILVFAFGELLFSPRFSEYVARVAPKDKVASYMSLAALPMFIAKP
INGIIGGLLVAYLCYDGICAKMDTGHIGFWDSPEFMWTIYLAMAVISPIAIIMTRRTITSDHPEEDAASPPISAIEAETD
PALTAEELTEANS
>Mature_493_residues
MNESANPILKYFSEFKILKTVSKDFWLTNVVQFFDGMAYFSMITVFVLYLTDYCSFNDADAALWVGLYTLFISAFVFAVG
SICDIIGIRRTYLIGFIILIAGRLIMGFGPDLSPTVDSGRLAVMAGILIMSFGTAFMSPVIQTSIRRFTPLKARSTGFNI
YYLLMNISAVIANVFLIEFFRKHFGAVDGGYWIINFGTLMVLLGCITTRFINEDNYAEPSEREANINAPLRRPLQLFMEV
WKESAFRKLILFLVLTMGVRIVFTLQFLVMPKYYVRTLYDDFAIGSINAVNPAIIVSGLILLIPVLGRFSTVGLMIAGMS
ISAFSLVFMAIPIEWYYLVPGIETRSQAYLVAIVAQILVFAFGELLFSPRFSEYVARVAPKDKVASYMSLAALPMFIAKP
INGIIGGLLVAYLCYDGICAKMDTGHIGFWDSPEFMWTIYLAMAVISPIAIIMTRRTITSDHPEEDAASPPISAIEAETD
PALTAEELTEANS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54907; Mature: 54907

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCHHHHHCCCC
>Mature Secondary Structure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CCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA