Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is nagA [H]
Identifier: 187735449
GI number: 187735449
Start: 1128857
End: 1130005
Strand: Reverse
Name: nagA [H]
Synonym: Amuc_0948
Alternate gene names: 187735449
Gene position: 1130005-1128857 (Counterclockwise)
Preceding gene: 187735450
Following gene: 187735448
Centisome position: 42.42
GC content: 61.1
Gene sequence:
>1149_bases ATGAAGACACTCATTAAAAACGCACGCATCATCTCCCCCGGCATCGATATGCCCGGGGCTGCCGTGGAAATGGAAGGCAA AACCATTACCGCCGTCTATCCCGCCGGGAGCGAACTTCCCGCCGCAGACAAGGTCGTGGATGCGGAAGGCCGCATGCTCC TTCCCGGCTTCATTGACATCCACAGCCACGGCGCCGGCGGCTGCGACACCTGCGACGCCAAGCTGGAAAGCCTCCGCACC ATTGCGGAATGCAAAATGAAGGAAGGCGTCACTTCCTGGCTGCCGACCACCCTCACCCTGTCCCCCAAGGTGCTGGAAGA CGTATGCGCCTCCGTGGCGGAATACATGAAGAACCAGGAATTCGCCAAGACTCCCGGCGTCCACCTGGAAGGGCCGTTCA TCAACCCCAAATGCTGCGGCGCGCAGAATCCCGCCTTTGTCCGCCAGCCGGATTACGATGAAGTAGCCAACCTGAACTCC ATCGCCAAGGTGCTGCTGGTCTCCCTGGCGCCGGAAATGCCCGGAGCCATTGAATTCATTGAGAAAGCCACGGCCAACGG CATCCGCTGCTCCGCCGGGCACAGCGCCGCCACCCATGAGGACTTCAACAGGGCGAAGTCTGCGGGGCTGGCGCACCTGA CCCACTACTGCAACCAGATGTCCCCCCTGCACCACCGTGAAATCGGCCTGGTGGGGTCCGGCCTGCTGGACAGGGAAATC AAGATTGAAATCATCTGCGACACCATCCACCTCTGCGCGGACATGCTCAAAACCGTGTTCAAGAACAAGGATTCTGACCA GATGCTGATGATTACGGACTCCCTGGCCTGCTCCTGGATGCCGGACGGCCCCGGAGACCTGGGCGGCCTGCCCATCATCG TGAAAGACGGCGTGGCCCGTCTGCAGGAATCCGGCGCCCTGGCCGGCAGCACCCTCAAATACGCCCACGGCCTGAAAAAC GTGCACCGCCTGACAGGGAAACCCCTCAGCGACCTGGTGAAAGCCACCTCCTGGAACCAGGCGCAGTCCCTGGGCCTGGA AGGCCTGGGCAAAATCGCCCCCGGCTTCACGGCGGACATGGTTCTGCTGGACGATGACTTCAATACCTGCAAGGTATTCA TCGACGGCGTGGAAAAATACAGCGCGTAA
Upstream 100 bases:
>100_bases CCCATTCCCGGTTTTCCGCAGGAAGCGGAGGCCAGGCGGGAAGACGCGGACGAACGGAGAAAAACGACGATAAACATCCA TCCAACAACCATTCATTTTT
Downstream 100 bases:
>100_bases CCGCGTTTCCGCGCGCCGGAAGGAGACGTCCCGCCCCTTCCGGCGCGCCTTCCTCCCTTTTACCATATTTCAACATTCAC CTCCATGGCTATTACCATTG
Product: N-acetylglucosamine-6-phosphate deacetylase
Products: NA
Alternate protein names: GlcNAc 6-P deacetylase [H]
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MKTLIKNARIISPGIDMPGAAVEMEGKTITAVYPAGSELPAADKVVDAEGRMLLPGFIDIHSHGAGGCDTCDAKLESLRT IAECKMKEGVTSWLPTTLTLSPKVLEDVCASVAEYMKNQEFAKTPGVHLEGPFINPKCCGAQNPAFVRQPDYDEVANLNS IAKVLLVSLAPEMPGAIEFIEKATANGIRCSAGHSAATHEDFNRAKSAGLAHLTHYCNQMSPLHHREIGLVGSGLLDREI KIEIICDTIHLCADMLKTVFKNKDSDQMLMITDSLACSWMPDGPGDLGGLPIIVKDGVARLQESGALAGSTLKYAHGLKN VHRLTGKPLSDLVKATSWNQAQSLGLEGLGKIAPGFTADMVLLDDDFNTCKVFIDGVEKYSA
Sequences:
>Translated_382_residues MKTLIKNARIISPGIDMPGAAVEMEGKTITAVYPAGSELPAADKVVDAEGRMLLPGFIDIHSHGAGGCDTCDAKLESLRT IAECKMKEGVTSWLPTTLTLSPKVLEDVCASVAEYMKNQEFAKTPGVHLEGPFINPKCCGAQNPAFVRQPDYDEVANLNS IAKVLLVSLAPEMPGAIEFIEKATANGIRCSAGHSAATHEDFNRAKSAGLAHLTHYCNQMSPLHHREIGLVGSGLLDREI KIEIICDTIHLCADMLKTVFKNKDSDQMLMITDSLACSWMPDGPGDLGGLPIIVKDGVARLQESGALAGSTLKYAHGLKN VHRLTGKPLSDLVKATSWNQAQSLGLEGLGKIAPGFTADMVLLDDDFNTCKVFIDGVEKYSA >Mature_382_residues MKTLIKNARIISPGIDMPGAAVEMEGKTITAVYPAGSELPAADKVVDAEGRMLLPGFIDIHSHGAGGCDTCDAKLESLRT IAECKMKEGVTSWLPTTLTLSPKVLEDVCASVAEYMKNQEFAKTPGVHLEGPFINPKCCGAQNPAFVRQPDYDEVANLNS IAKVLLVSLAPEMPGAIEFIEKATANGIRCSAGHSAATHEDFNRAKSAGLAHLTHYCNQMSPLHHREIGLVGSGLLDREI KIEIICDTIHLCADMLKTVFKNKDSDQMLMITDSLACSWMPDGPGDLGGLPIIVKDGVARLQESGALAGSTLKYAHGLKN VHRLTGKPLSDLVKATSWNQAQSLGLEGLGKIAPGFTADMVLLDDDFNTCKVFIDGVEKYSA
Specific function: N-acetylglucosamine utilization. [C]
COG id: COG1820
COG function: function code G; N-acetylglucosamine-6-phosphate deacetylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nagA family [H]
Homologues:
Organism=Homo sapiens, GI21361513, Length=382, Percent_Identity=28.7958115183246, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI224922791, Length=382, Percent_Identity=28.7958115183246, Blast_Score=119, Evalue=6e-27, Organism=Escherichia coli, GI1786892, Length=368, Percent_Identity=33.1521739130435, Blast_Score=155, Evalue=5e-39, Organism=Caenorhabditis elegans, GI17553768, Length=362, Percent_Identity=31.2154696132597, Blast_Score=136, Evalue=1e-32, Organism=Drosophila melanogaster, GI19920392, Length=346, Percent_Identity=30.635838150289, Blast_Score=132, Evalue=5e-31, Organism=Drosophila melanogaster, GI281361140, Length=359, Percent_Identity=29.2479108635098, Blast_Score=131, Evalue=8e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR003764 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.1.25 [H]
Molecular weight: Translated: 40827; Mature: 40827
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLIKNARIISPGIDMPGAAVEMEGKTITAVYPAGSELPAADKVVDAEGRMLLPGFIDI CCCHHCCCEEECCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCEECCCCCEECCCEEEE HSHGAGGCDTCDAKLESLRTIAECKMKEGVTSWLPTTLTLSPKVLEDVCASVAEYMKNQE ECCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCEEEECHHHHHHHHHHHHHHHCCCC FAKTPGVHLEGPFINPKCCGAQNPAFVRQPDYDEVANLNSIAKVLLVSLAPEMPGAIEFI HHCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH EKATANGIRCSAGHSAATHEDFNRAKSAGLAHLTHYCNQMSPLHHREIGLVGSGLLDREI HHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEECCCCCCCEE KIEIICDTIHLCADMLKTVFKNKDSDQMLMITDSLACSWMPDGPGDLGGLPIIVKDGVAR EEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEECCCCCCCCCCCCCEEECCHHHH LQESGALAGSTLKYAHGLKNVHRLTGKPLSDLVKATSWNQAQSLGLEGLGKIAPGFTADM HHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHCCHHHHHHCCCCCCEEE VLLDDDFNTCKVFIDGVEKYSA EEEECCCCEEHHHHHHHHHHCC >Mature Secondary Structure MKTLIKNARIISPGIDMPGAAVEMEGKTITAVYPAGSELPAADKVVDAEGRMLLPGFIDI CCCHHCCCEEECCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCEECCCCCEECCCEEEE HSHGAGGCDTCDAKLESLRTIAECKMKEGVTSWLPTTLTLSPKVLEDVCASVAEYMKNQE ECCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCEEEECHHHHHHHHHHHHHHHCCCC FAKTPGVHLEGPFINPKCCGAQNPAFVRQPDYDEVANLNSIAKVLLVSLAPEMPGAIEFI HHCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH EKATANGIRCSAGHSAATHEDFNRAKSAGLAHLTHYCNQMSPLHHREIGLVGSGLLDREI HHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEECCCCCCCEE KIEIICDTIHLCADMLKTVFKNKDSDQMLMITDSLACSWMPDGPGDLGGLPIIVKDGVAR EEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEECCCCCCCCCCCCCEEECCHHHH LQESGALAGSTLKYAHGLKNVHRLTGKPLSDLVKATSWNQAQSLGLEGLGKIAPGFTADM HHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHCCHHHHHHCCCCCCEEE VLLDDDFNTCKVFIDGVEKYSA EEEECCCCEEHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA