Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is epsJ [H]

Identifier: 187735444

GI number: 187735444

Start: 1123289

End: 1124344

Strand: Reverse

Name: epsJ [H]

Synonym: Amuc_0943

Alternate gene names: 187735444

Gene position: 1124344-1123289 (Counterclockwise)

Preceding gene: 187735445

Following gene: 187735443

Centisome position: 42.2

GC content: 56.34

Gene sequence:

>1056_bases
ATGACCCGAACCCGCCCGCCACAGCCCCAGGTTTCCGTCATCGTTCCCGTTTACAATCAGGAACAATATCTTGAAGAGTG
CATCAGCAGCATCCGCCGGCAAACCCTTGCGGAGTGGGAATGCATCATCGTCAACGACGGGTCCTCCGACTCGTCAGGGG
AAATCGCCCGGCGCTTTTCAGAGGAGGACTCAAGAATCCTCTGCCTCGAACAGGAAAACAGGGGCGTTTCCTCCGCCCGC
AATCTGGGCATGCGGCACGCTTCCGGGCGCTATTTGTGTTTTGTTGACGGTGACGATTTCATCGACGCGGCCTTTCTCAA
ACATCTTCTGGACGCCTCGGACCGCGGAGCAAGCGATTTGACCGTAGCGGGAAAGCTGTTCTGCGACAGGTTTCCGCTGG
ACAAAATCCCCGCCCTCCCCACCTGCGGCATATTTCTGCGCCGGGAGTTCCCCTTGAAAAACAATCTGGAATTCCCGGAA
GGCATTCACCCCTGTGAGGACGGCCTCTTCTCGCATTTCGTGCTCGCGCTGACAGAAAAAATTTCCTTCTGTCCGGAGGC
CGTTTACCATTACCGCCAGCATGAACAGGGCAACCACCACCAGATACGGAAAAGAACCGCCGACATCCTGCCCATGATCC
CCCGGTGGCTTTCCCTGATTGAAGAGTTTTATGAACAACGCCATCTCTGGAAAAGAAAAGCCGGCCATCTCGTCCGCTTT
ATTGAGCATGAACCATTTGAACTGAGGCTGCTTGGCATGCCTTTCTCCCCGCCGGAGCAGGAAATACTTTACAGCATCAT
CCGGGACTTCCTGAACGCCCATTGCACGGCCGCCGAGTGCCGGAGGGCCTCCCTGCATCTTCCTTTCCGCCTGTTGTTGC
AATCCTCCGGCTTTTCAGACTTCGGAAGAAGGCTCCGGAGGGCCGGCAAAAACACCGGAATCCGCCGGAAGCTCCTCCAT
TTCTGCCCTGTCCCCTCATGGAGGAGGAATGGCAGGGCACAGCTGCGGCAAGTACGCGAACAGCTGGAGGAAATACGCAG
GAATATCACGTTTTAA

Upstream 100 bases:

>100_bases
CGCTTCTCCAACTGGGCAGGGATATTGACGGGGAATCCCGTTCCAATCTGGAGCGGGCCCTTGCCGCATGCTCCCCCTCC
GAACCTCAACAGGCCCGCTC

Downstream 100 bases:

>100_bases
CCCCTTCCCCTGCTTGAACATGGCAAAAGGAAAAATAATAGTCATGCGTCTTTTCGGAGGGCTGGGAAACCAGCTGTTCC
AATACGCCTTCCTCTTCGCG

Product: glycosyl transferase family 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MTRTRPPQPQVSVIVPVYNQEQYLEECISSIRRQTLAEWECIIVNDGSSDSSGEIARRFSEEDSRILCLEQENRGVSSAR
NLGMRHASGRYLCFVDGDDFIDAAFLKHLLDASDRGASDLTVAGKLFCDRFPLDKIPALPTCGIFLRREFPLKNNLEFPE
GIHPCEDGLFSHFVLALTEKISFCPEAVYHYRQHEQGNHHQIRKRTADILPMIPRWLSLIEEFYEQRHLWKRKAGHLVRF
IEHEPFELRLLGMPFSPPEQEILYSIIRDFLNAHCTAAECRRASLHLPFRLLLQSSGFSDFGRRLRRAGKNTGIRRKLLH
FCPVPSWRRNGRAQLRQVREQLEEIRRNITF

Sequences:

>Translated_351_residues
MTRTRPPQPQVSVIVPVYNQEQYLEECISSIRRQTLAEWECIIVNDGSSDSSGEIARRFSEEDSRILCLEQENRGVSSAR
NLGMRHASGRYLCFVDGDDFIDAAFLKHLLDASDRGASDLTVAGKLFCDRFPLDKIPALPTCGIFLRREFPLKNNLEFPE
GIHPCEDGLFSHFVLALTEKISFCPEAVYHYRQHEQGNHHQIRKRTADILPMIPRWLSLIEEFYEQRHLWKRKAGHLVRF
IEHEPFELRLLGMPFSPPEQEILYSIIRDFLNAHCTAAECRRASLHLPFRLLLQSSGFSDFGRRLRRAGKNTGIRRKLLH
FCPVPSWRRNGRAQLRQVREQLEEIRRNITF
>Mature_350_residues
TRTRPPQPQVSVIVPVYNQEQYLEECISSIRRQTLAEWECIIVNDGSSDSSGEIARRFSEEDSRILCLEQENRGVSSARN
LGMRHASGRYLCFVDGDDFIDAAFLKHLLDASDRGASDLTVAGKLFCDRFPLDKIPALPTCGIFLRREFPLKNNLEFPEG
IHPCEDGLFSHFVLALTEKISFCPEAVYHYRQHEQGNHHQIRKRTADILPMIPRWLSLIEEFYEQRHLWKRKAGHLVRFI
EHEPFELRLLGMPFSPPEQEILYSIIRDFLNAHCTAAECRRASLHLPFRLLLQSSGFSDFGRRLRRAGKNTGIRRKLLHF
CPVPSWRRNGRAQLRQVREQLEEIRRNITF

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI57770468, Length=102, Percent_Identity=38.2352941176471, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI1790044, Length=226, Percent_Identity=27.8761061946903, Blast_Score=98, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 40868; Mature: 40737

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTRPPQPQVSVIVPVYNQEQYLEECISSIRRQTLAEWECIIVNDGSSDSSGEIARRFS
CCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHC
EEDSRILCLEQENRGVSSARNLGMRHASGRYLCFVDGDDFIDAAFLKHLLDASDRGASDL
CCCCEEEEEECCCCCHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCH
TVAGKLFCDRFPLDKIPALPTCGIFLRREFPLKNNLEFPEGIHPCEDGLFSHFVLALTEK
HHHHHHHHCCCCCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ISFCPEAVYHYRQHEQGNHHQIRKRTADILPMIPRWLSLIEEFYEQRHLWKRKAGHLVRF
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEHEPFELRLLGMPFSPPEQEILYSIIRDFLNAHCTAAECRRASLHLPFRLLLQSSGFSD
HCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHCCCCHH
FGRRLRRAGKNTGIRRKLLHFCPVPSWRRNGRAQLRQVREQLEEIRRNITF
HHHHHHHCCCCCCHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TRTRPPQPQVSVIVPVYNQEQYLEECISSIRRQTLAEWECIIVNDGSSDSSGEIARRFS
CCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHC
EEDSRILCLEQENRGVSSARNLGMRHASGRYLCFVDGDDFIDAAFLKHLLDASDRGASDL
CCCCEEEEEECCCCCHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCH
TVAGKLFCDRFPLDKIPALPTCGIFLRREFPLKNNLEFPEGIHPCEDGLFSHFVLALTEK
HHHHHHHHCCCCCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ISFCPEAVYHYRQHEQGNHHQIRKRTADILPMIPRWLSLIEEFYEQRHLWKRKAGHLVRF
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEHEPFELRLLGMPFSPPEQEILYSIIRDFLNAHCTAAECRRASLHLPFRLLLQSSGFSD
HCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHCCCCHH
FGRRLRRAGKNTGIRRKLLHFCPVPSWRRNGRAQLRQVREQLEEIRRNITF
HHHHHHHCCCCCCHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]