Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735443

Identifier: 187735443

GI number: 187735443

Start: 1122373

End: 1123245

Strand: Reverse

Name: 187735443

Synonym: Amuc_0942

Alternate gene names: NA

Gene position: 1123245-1122373 (Counterclockwise)

Preceding gene: 187735444

Following gene: 187735442

Centisome position: 42.16

GC content: 57.04

Gene sequence:

>873_bases
ATGCGTCTTTTCGGAGGGCTGGGAAACCAGCTGTTCCAATACGCCTTCCTCTTCGCGCTCTCCCGGCAAGGGGGAAAAGC
AAGACTGGAAACCTCATCATATGAACATGATGATAAGAGGGTCTGCGAACTCCATCACTTCCGGGTTTCCCTTCCCATTG
AAGGAGGCCCTCCCCCCTGGGCTTTCCGCAAGTCCCGTATTCCCGCCTGCCTGCGTTCCCTGTTCGCCGCTCCCAAATAT
CCTCATTTCCGGGAGGAAAAACGGCACGGGTTCGATCCCGGTCTCGCAGCTCCTCCCCGCCGCCATACCTATTTCAAGGG
ATATTTTCAGACGGAACAATACTTCCTCCACTGCCGGGAACAGCTTTGCAGGGAATTCCGTCTGAAAACTCCCCTGACTC
CGGAAAACGCCCGCATTCTTGAAGATATCCGTTCATGCTGCTCCATTTCCCTGCACATCCGCAGAACGGATTACCTCTCC
AACCCTTACCTTTCTCCGCCGCCTCTGGAATACTACCTCCGGAGCATGGCTGAAATGGAAGGAAGGCTGCGGGCGGCAGG
CGCTCCGCAGGAATCCCTGCGTTACTTCATCTTTTCGGACGACATAGAATGGGCCCGGCAAAACCTGAGGCCCGCCCTGC
CCCATGTCCATGTGGATATCAATGACGGCGGCACCGGCTACTTCGATCTGGAACTGATGCGAAACTGCCGCCACCACATC
ATCGCCAACAGCACTTTCTCCTGGTGGGCGGCCTGGCTCAACGAACACGCGGAGAAAATCGTCATCGCGCCGCGCATCTG
GTTCAACAGGGAGGAAGGCGACCGGTACCATACGGATGACGCGCTCATCCCCGGCTCATGGCTCCGGATATAA

Upstream 100 bases:

>100_bases
CAGCTGCGGCAAGTACGCGAACAGCTGGAGGAAATACGCAGGAATATCACGTTTTAACCCCTTCCCCTGCTTGAACATGG
CAAAAGGAAAAATAATAGTC

Downstream 100 bases:

>100_bases
CCCCGTTTCCTATACAGCAGACCATGCCTCTCCCCTCACCCCTCATTTCCGTCATCGTCCCCATCTACAACATGGAGCCT
CTTCTTCCGCGCTGTCTGGA

Product: glycosyl transferase family 11

Products: NA

Alternate protein names: Glycosyl Transferase Family; Glycosyl Transferase; Fucosyl Transferase; Glycosyl Transferase Family Protein; Glycosyltransferase Family; Family; LPS Biosynthesis Related Alpha-1 2-Fucosyltransferase; Fucosyltransferase WbgN; Exopolysaccharide Biosynthesis Protein Glycosyltransferase; Fucosyltransferase

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MRLFGGLGNQLFQYAFLFALSRQGGKARLETSSYEHDDKRVCELHHFRVSLPIEGGPPPWAFRKSRIPACLRSLFAAPKY
PHFREEKRHGFDPGLAAPPRRHTYFKGYFQTEQYFLHCREQLCREFRLKTPLTPENARILEDIRSCCSISLHIRRTDYLS
NPYLSPPPLEYYLRSMAEMEGRLRAAGAPQESLRYFIFSDDIEWARQNLRPALPHVHVDINDGGTGYFDLELMRNCRHHI
IANSTFSWWAAWLNEHAEKIVIAPRIWFNREEGDRYHTDDALIPGSWLRI

Sequences:

>Translated_290_residues
MRLFGGLGNQLFQYAFLFALSRQGGKARLETSSYEHDDKRVCELHHFRVSLPIEGGPPPWAFRKSRIPACLRSLFAAPKY
PHFREEKRHGFDPGLAAPPRRHTYFKGYFQTEQYFLHCREQLCREFRLKTPLTPENARILEDIRSCCSISLHIRRTDYLS
NPYLSPPPLEYYLRSMAEMEGRLRAAGAPQESLRYFIFSDDIEWARQNLRPALPHVHVDINDGGTGYFDLELMRNCRHHI
IANSTFSWWAAWLNEHAEKIVIAPRIWFNREEGDRYHTDDALIPGSWLRI
>Mature_290_residues
MRLFGGLGNQLFQYAFLFALSRQGGKARLETSSYEHDDKRVCELHHFRVSLPIEGGPPPWAFRKSRIPACLRSLFAAPKY
PHFREEKRHGFDPGLAAPPRRHTYFKGYFQTEQYFLHCREQLCREFRLKTPLTPENARILEDIRSCCSISLHIRRTDYLS
NPYLSPPPLEYYLRSMAEMEGRLRAAGAPQESLRYFIFSDDIEWARQNLRPALPHVHVDINDGGTGYFDLELMRNCRHHI
IANSTFSWWAAWLNEHAEKIVIAPRIWFNREEGDRYHTDDALIPGSWLRI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI148224427, Length=261, Percent_Identity=24.904214559387, Blast_Score=69, Evalue=7e-12,
Organism=Homo sapiens, GI148237372, Length=261, Percent_Identity=24.904214559387, Blast_Score=69, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34050; Mature: 34050

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLFGGLGNQLFQYAFLFALSRQGGKARLETSSYEHDDKRVCELHHFRVSLPIEGGPPPW
CCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHEEEEEEEECCCCCCCC
AFRKSRIPACLRSLFAAPKYPHFREEKRHGFDPGLAAPPRRHTYFKGYFQTEQYFLHCRE
HHHHHCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHH
QLCREFRLKTPLTPENARILEDIRSCCSISLHIRRTDYLSNPYLSPPPLEYYLRSMAEME
HHHHHHHCCCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
GRLRAAGAPQESLRYFIFSDDIEWARQNLRPALPHVHVDINDGGTGYFDLELMRNCRHHI
HHHHCCCCCHHHCEEEEEECCHHHHHHCCCCCCCEEEEEECCCCCCEEHHHHHHHHHHHH
IANSTFSWWAAWLNEHAEKIVIAPRIWFNREEGDRYHTDDALIPGSWLRI
CCCCHHHHHHHHHHHHCCEEEECCEEEECCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRLFGGLGNQLFQYAFLFALSRQGGKARLETSSYEHDDKRVCELHHFRVSLPIEGGPPPW
CCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHEEEEEEEECCCCCCCC
AFRKSRIPACLRSLFAAPKYPHFREEKRHGFDPGLAAPPRRHTYFKGYFQTEQYFLHCRE
HHHHHCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHH
QLCREFRLKTPLTPENARILEDIRSCCSISLHIRRTDYLSNPYLSPPPLEYYLRSMAEME
HHHHHHHCCCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
GRLRAAGAPQESLRYFIFSDDIEWARQNLRPALPHVHVDINDGGTGYFDLELMRNCRHHI
HHHHCCCCCHHHCEEEEEECCHHHHHHCCCCCCCEEEEEECCCCCCEEHHHHHHHHHHHH
IANSTFSWWAAWLNEHAEKIVIAPRIWFNREEGDRYHTDDALIPGSWLRI
CCCCHHHHHHHHHHHHCCEEEECCEEEECCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA