Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735443
Identifier: 187735443
GI number: 187735443
Start: 1122373
End: 1123245
Strand: Reverse
Name: 187735443
Synonym: Amuc_0942
Alternate gene names: NA
Gene position: 1123245-1122373 (Counterclockwise)
Preceding gene: 187735444
Following gene: 187735442
Centisome position: 42.16
GC content: 57.04
Gene sequence:
>873_bases ATGCGTCTTTTCGGAGGGCTGGGAAACCAGCTGTTCCAATACGCCTTCCTCTTCGCGCTCTCCCGGCAAGGGGGAAAAGC AAGACTGGAAACCTCATCATATGAACATGATGATAAGAGGGTCTGCGAACTCCATCACTTCCGGGTTTCCCTTCCCATTG AAGGAGGCCCTCCCCCCTGGGCTTTCCGCAAGTCCCGTATTCCCGCCTGCCTGCGTTCCCTGTTCGCCGCTCCCAAATAT CCTCATTTCCGGGAGGAAAAACGGCACGGGTTCGATCCCGGTCTCGCAGCTCCTCCCCGCCGCCATACCTATTTCAAGGG ATATTTTCAGACGGAACAATACTTCCTCCACTGCCGGGAACAGCTTTGCAGGGAATTCCGTCTGAAAACTCCCCTGACTC CGGAAAACGCCCGCATTCTTGAAGATATCCGTTCATGCTGCTCCATTTCCCTGCACATCCGCAGAACGGATTACCTCTCC AACCCTTACCTTTCTCCGCCGCCTCTGGAATACTACCTCCGGAGCATGGCTGAAATGGAAGGAAGGCTGCGGGCGGCAGG CGCTCCGCAGGAATCCCTGCGTTACTTCATCTTTTCGGACGACATAGAATGGGCCCGGCAAAACCTGAGGCCCGCCCTGC CCCATGTCCATGTGGATATCAATGACGGCGGCACCGGCTACTTCGATCTGGAACTGATGCGAAACTGCCGCCACCACATC ATCGCCAACAGCACTTTCTCCTGGTGGGCGGCCTGGCTCAACGAACACGCGGAGAAAATCGTCATCGCGCCGCGCATCTG GTTCAACAGGGAGGAAGGCGACCGGTACCATACGGATGACGCGCTCATCCCCGGCTCATGGCTCCGGATATAA
Upstream 100 bases:
>100_bases CAGCTGCGGCAAGTACGCGAACAGCTGGAGGAAATACGCAGGAATATCACGTTTTAACCCCTTCCCCTGCTTGAACATGG CAAAAGGAAAAATAATAGTC
Downstream 100 bases:
>100_bases CCCCGTTTCCTATACAGCAGACCATGCCTCTCCCCTCACCCCTCATTTCCGTCATCGTCCCCATCTACAACATGGAGCCT CTTCTTCCGCGCTGTCTGGA
Product: glycosyl transferase family 11
Products: NA
Alternate protein names: Glycosyl Transferase Family; Glycosyl Transferase; Fucosyl Transferase; Glycosyl Transferase Family Protein; Glycosyltransferase Family; Family; LPS Biosynthesis Related Alpha-1 2-Fucosyltransferase; Fucosyltransferase WbgN; Exopolysaccharide Biosynthesis Protein Glycosyltransferase; Fucosyltransferase
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MRLFGGLGNQLFQYAFLFALSRQGGKARLETSSYEHDDKRVCELHHFRVSLPIEGGPPPWAFRKSRIPACLRSLFAAPKY PHFREEKRHGFDPGLAAPPRRHTYFKGYFQTEQYFLHCREQLCREFRLKTPLTPENARILEDIRSCCSISLHIRRTDYLS NPYLSPPPLEYYLRSMAEMEGRLRAAGAPQESLRYFIFSDDIEWARQNLRPALPHVHVDINDGGTGYFDLELMRNCRHHI IANSTFSWWAAWLNEHAEKIVIAPRIWFNREEGDRYHTDDALIPGSWLRI
Sequences:
>Translated_290_residues MRLFGGLGNQLFQYAFLFALSRQGGKARLETSSYEHDDKRVCELHHFRVSLPIEGGPPPWAFRKSRIPACLRSLFAAPKY PHFREEKRHGFDPGLAAPPRRHTYFKGYFQTEQYFLHCREQLCREFRLKTPLTPENARILEDIRSCCSISLHIRRTDYLS NPYLSPPPLEYYLRSMAEMEGRLRAAGAPQESLRYFIFSDDIEWARQNLRPALPHVHVDINDGGTGYFDLELMRNCRHHI IANSTFSWWAAWLNEHAEKIVIAPRIWFNREEGDRYHTDDALIPGSWLRI >Mature_290_residues MRLFGGLGNQLFQYAFLFALSRQGGKARLETSSYEHDDKRVCELHHFRVSLPIEGGPPPWAFRKSRIPACLRSLFAAPKY PHFREEKRHGFDPGLAAPPRRHTYFKGYFQTEQYFLHCREQLCREFRLKTPLTPENARILEDIRSCCSISLHIRRTDYLS NPYLSPPPLEYYLRSMAEMEGRLRAAGAPQESLRYFIFSDDIEWARQNLRPALPHVHVDINDGGTGYFDLELMRNCRHHI IANSTFSWWAAWLNEHAEKIVIAPRIWFNREEGDRYHTDDALIPGSWLRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI148224427, Length=261, Percent_Identity=24.904214559387, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI148237372, Length=261, Percent_Identity=24.904214559387, Blast_Score=69, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34050; Mature: 34050
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLFGGLGNQLFQYAFLFALSRQGGKARLETSSYEHDDKRVCELHHFRVSLPIEGGPPPW CCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHEEEEEEEECCCCCCCC AFRKSRIPACLRSLFAAPKYPHFREEKRHGFDPGLAAPPRRHTYFKGYFQTEQYFLHCRE HHHHHCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHH QLCREFRLKTPLTPENARILEDIRSCCSISLHIRRTDYLSNPYLSPPPLEYYLRSMAEME HHHHHHHCCCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH GRLRAAGAPQESLRYFIFSDDIEWARQNLRPALPHVHVDINDGGTGYFDLELMRNCRHHI HHHHCCCCCHHHCEEEEEECCHHHHHHCCCCCCCEEEEEECCCCCCEEHHHHHHHHHHHH IANSTFSWWAAWLNEHAEKIVIAPRIWFNREEGDRYHTDDALIPGSWLRI CCCCHHHHHHHHHHHHCCEEEECCEEEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRLFGGLGNQLFQYAFLFALSRQGGKARLETSSYEHDDKRVCELHHFRVSLPIEGGPPPW CCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHEEEEEEEECCCCCCCC AFRKSRIPACLRSLFAAPKYPHFREEKRHGFDPGLAAPPRRHTYFKGYFQTEQYFLHCRE HHHHHCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHH QLCREFRLKTPLTPENARILEDIRSCCSISLHIRRTDYLSNPYLSPPPLEYYLRSMAEME HHHHHHHCCCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH GRLRAAGAPQESLRYFIFSDDIEWARQNLRPALPHVHVDINDGGTGYFDLELMRNCRHHI HHHHCCCCCHHHCEEEEEECCHHHHHHCCCCCCCEEEEEECCCCCCEEHHHHHHHHHHHH IANSTFSWWAAWLNEHAEKIVIAPRIWFNREEGDRYHTDDALIPGSWLRI CCCCHHHHHHHHHHHHCCEEEECCEEEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA