Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735441

Identifier: 187735441

GI number: 187735441

Start: 1119855

End: 1121204

Strand: Reverse

Name: 187735441

Synonym: Amuc_0940

Alternate gene names: NA

Gene position: 1121204-1119855 (Counterclockwise)

Preceding gene: 187735442

Following gene: 187735440

Centisome position: 42.09

GC content: 58.0

Gene sequence:

>1350_bases
GTGTTCATCTATTCCTACCAGCAACACGACCACCTCCTGCCCGGCAATGACAGAATGCTGGTGATCGGCAGTTCCGCTCT
GGCAAAAAACCATGGCCATCTGAAATCGTCCCGACTGGCCGCCGACACGCTCATCTTCAATTTCCCGCTCAACCATCCCC
GCCTGTGGCGGCAAATGGAGCACAGCCTTTCCGGCGCCCGCTACAGCATCATTCTTTTCATGTGGCCGCCCCTGCATCTT
TCCCCGGCCAACGGCAGGCTCATGGAAAAGCCCCCAGAAGGGGGCGGGCCCACGGAAAGCGCCGAAGATATGCTTTGCAG
GCTTTTCGCCTTTCTGCGGAAACAGACGCGCCGCCTGATCCTCCTGTCATCCCCGCCCTCCGACTACGGCAGCGCCCGGC
ACCCCTACGCGGAAGAACCGGGCGTCCTTGAAGCCTGGAACGCCCTTCTTCGCACGCTGGCAGGCAAGCTGAACCTTCCA
TTCATTGACTTTTGCGGCGATATGCTGCAATACCGCCCCCTGCCCGGCTCCGGGGAAGAAGATTTCCCGGAAGCTTACCG
GAATCTGGGGAAACAGGTCCTCCACCGGCTGCCTTTCGGCCAAACGTGGGTGAGAAGGCGTTCCGGGAAAATACACCGCC
TGCTGGAGAAAAGAAGAAAACGCCGGAAAGAACGCATGCTTGCCCGATGGAGGACATTGGCGGCCCCTCCCCATTACCGT
GAGGAAACCGACTGGATTACGGCCATTCATTCAGAAAAAGGGCAGGCGCGCATACTGCTCATTGGCGGTTCCGTCATGCG
GCATTTGTGGCGGCCCCTTGCCTCAGAACTTCAGGAAGACATTGATTTGTTCTCCTCCACGCTGATTCCCGGAGATCCGG
ACTATCTCCCCACTCTTGCAGGATATTTTCCCTCCGCCGGATACGAAGCCGTCATTGTTTCCTTCGGTTCCCACGTCACC
AATAAAGTCTCCGCCATTTCCGTGGATGACTTCCGCAAAAATTACATGGCATTCGTCTCCCAGCTCAGCAAACGCTGCCG
TTTCCTCATCCTGGCAACCAGTACGTCCATCATGGATGGGCCGGACGGCACGCTGAATGAAGAAAAAGAGAAAATCATCA
CCGCCTTTAATGCCATTGTCCGCGAGGCGGCATCTTCCCTGCCCGGCGCGGTTCTTTCAGACCACCATGACTTCATGCAG
GGGCGCAGATATATAGATCCCTTCCATTTCTCCCCTCCGGACCGCGCGTACCAGGCAGGGAAAACAGCCGGACTGCTCCT
GCCCCTTCTCTCCGCCCGGCAGGAACCGCCAAAGGAACAGGAATACCCGCAAAGCCGCCCCGAACCATGA

Upstream 100 bases:

>100_bases
GGTTTTCCAAAAACGGAATAGACACGCTCCAAATCCTCGGATACACTCTTTATTCTGCAAAGAAGCTCCCCCGATCATCC
CTGTAACTGCTGTTTTTCCC

Downstream 100 bases:

>100_bases
AACGGACAAATGAACGAAAACCGCCAAATTATTTTCCATGCGGGGAAAAACGGTTACCCCCCGCAAAAATCCCGGCCCCG
GCATTTAAAGACTTCAGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MFIYSYQQHDHLLPGNDRMLVIGSSALAKNHGHLKSSRLAADTLIFNFPLNHPRLWRQMEHSLSGARYSIILFMWPPLHL
SPANGRLMEKPPEGGGPTESAEDMLCRLFAFLRKQTRRLILLSSPPSDYGSARHPYAEEPGVLEAWNALLRTLAGKLNLP
FIDFCGDMLQYRPLPGSGEEDFPEAYRNLGKQVLHRLPFGQTWVRRRSGKIHRLLEKRRKRRKERMLARWRTLAAPPHYR
EETDWITAIHSEKGQARILLIGGSVMRHLWRPLASELQEDIDLFSSTLIPGDPDYLPTLAGYFPSAGYEAVIVSFGSHVT
NKVSAISVDDFRKNYMAFVSQLSKRCRFLILATSTSIMDGPDGTLNEEKEKIITAFNAIVREAASSLPGAVLSDHHDFMQ
GRRYIDPFHFSPPDRAYQAGKTAGLLLPLLSARQEPPKEQEYPQSRPEP

Sequences:

>Translated_449_residues
MFIYSYQQHDHLLPGNDRMLVIGSSALAKNHGHLKSSRLAADTLIFNFPLNHPRLWRQMEHSLSGARYSIILFMWPPLHL
SPANGRLMEKPPEGGGPTESAEDMLCRLFAFLRKQTRRLILLSSPPSDYGSARHPYAEEPGVLEAWNALLRTLAGKLNLP
FIDFCGDMLQYRPLPGSGEEDFPEAYRNLGKQVLHRLPFGQTWVRRRSGKIHRLLEKRRKRRKERMLARWRTLAAPPHYR
EETDWITAIHSEKGQARILLIGGSVMRHLWRPLASELQEDIDLFSSTLIPGDPDYLPTLAGYFPSAGYEAVIVSFGSHVT
NKVSAISVDDFRKNYMAFVSQLSKRCRFLILATSTSIMDGPDGTLNEEKEKIITAFNAIVREAASSLPGAVLSDHHDFMQ
GRRYIDPFHFSPPDRAYQAGKTAGLLLPLLSARQEPPKEQEYPQSRPEP
>Mature_449_residues
MFIYSYQQHDHLLPGNDRMLVIGSSALAKNHGHLKSSRLAADTLIFNFPLNHPRLWRQMEHSLSGARYSIILFMWPPLHL
SPANGRLMEKPPEGGGPTESAEDMLCRLFAFLRKQTRRLILLSSPPSDYGSARHPYAEEPGVLEAWNALLRTLAGKLNLP
FIDFCGDMLQYRPLPGSGEEDFPEAYRNLGKQVLHRLPFGQTWVRRRSGKIHRLLEKRRKRRKERMLARWRTLAAPPHYR
EETDWITAIHSEKGQARILLIGGSVMRHLWRPLASELQEDIDLFSSTLIPGDPDYLPTLAGYFPSAGYEAVIVSFGSHVT
NKVSAISVDDFRKNYMAFVSQLSKRCRFLILATSTSIMDGPDGTLNEEKEKIITAFNAIVREAASSLPGAVLSDHHDFMQ
GRRYIDPFHFSPPDRAYQAGKTAGLLLPLLSARQEPPKEQEYPQSRPEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50971; Mature: 50971

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIYSYQQHDHLLPGNDRMLVIGSSALAKNHGHLKSSRLAADTLIFNFPLNHPRLWRQME
CEEECCCCCCCCCCCCCEEEEEECHHHHHCCCCCHHHHHHHHHEEEECCCCCHHHHHHHH
HSLSGARYSIILFMWPPLHLSPANGRLMEKPPEGGGPTESAEDMLCRLFAFLRKQTRRLI
HHHCCCEEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEE
LLSSPPSDYGSARHPYAEEPGVLEAWNALLRTLAGKLNLPFIDFCGDMLQYRPLPGSGEE
EEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC
DFPEAYRNLGKQVLHRLPFGQTWVRRRSGKIHRLLEKRRKRRKERMLARWRTLAAPPHYR
HHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EETDWITAIHSEKGQARILLIGGSVMRHLWRPLASELQEDIDLFSSTLIPGDPDYLPTLA
CCCHHHHHEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
GYFPSAGYEAVIVSFGSHVTNKVSAISVDDFRKNYMAFVSQLSKRCRFLILATSTSIMDG
HHCCCCCCCEEEEEHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCC
PDGTLNEEKEKIITAFNAIVREAASSLPGAVLSDHHDFMQGRRYIDPFHFSPPDRAYQAG
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHCCCCCCCCCCCCCHHHHHCC
KTAGLLLPLLSARQEPPKEQEYPQSRPEP
CHHHHHHHHHHHCCCCCCHHCCCCCCCCC
>Mature Secondary Structure
MFIYSYQQHDHLLPGNDRMLVIGSSALAKNHGHLKSSRLAADTLIFNFPLNHPRLWRQME
CEEECCCCCCCCCCCCCEEEEEECHHHHHCCCCCHHHHHHHHHEEEECCCCCHHHHHHHH
HSLSGARYSIILFMWPPLHLSPANGRLMEKPPEGGGPTESAEDMLCRLFAFLRKQTRRLI
HHHCCCEEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEE
LLSSPPSDYGSARHPYAEEPGVLEAWNALLRTLAGKLNLPFIDFCGDMLQYRPLPGSGEE
EEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC
DFPEAYRNLGKQVLHRLPFGQTWVRRRSGKIHRLLEKRRKRRKERMLARWRTLAAPPHYR
HHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EETDWITAIHSEKGQARILLIGGSVMRHLWRPLASELQEDIDLFSSTLIPGDPDYLPTLA
CCCHHHHHEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
GYFPSAGYEAVIVSFGSHVTNKVSAISVDDFRKNYMAFVSQLSKRCRFLILATSTSIMDG
HHCCCCCCCEEEEEHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCC
PDGTLNEEKEKIITAFNAIVREAASSLPGAVLSDHHDFMQGRRYIDPFHFSPPDRAYQAG
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHCCCCCCCCCCCCCHHHHHCC
KTAGLLLPLLSARQEPPKEQEYPQSRPEP
CHHHHHHHHHHHCCCCCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA