Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is epsJ [H]

Identifier: 187735442

GI number: 187735442

Start: 1121219

End: 1122349

Strand: Reverse

Name: epsJ [H]

Synonym: Amuc_0941

Alternate gene names: 187735442

Gene position: 1122349-1121219 (Counterclockwise)

Preceding gene: 187735443

Following gene: 187735441

Centisome position: 42.13

GC content: 57.56

Gene sequence:

>1131_bases
ATGCCTCTCCCCTCACCCCTCATTTCCGTCATCGTCCCCATCTACAACATGGAGCCTCTTCTTCCGCGCTGTCTGGACAG
CCTGGCGGCACAAACCCTCCGCGACCTGGAAATCATCTGCGTGGACGACGGTTCAACCGACGGGTCCGGAGGCATCGTCC
GGAAATATGCTTCCGGAGACAGTCGTTTCCGCCTGATTACACAGGAAAATTCCGGCAGGGCGGAAGCCCGTAACGCGGGA
ATCAGGGCAGCCGCGGCGCCTTACCTGGGTTTTGCGGATCCGGATGACTACGTTGAGCCGGACATGTACGAACGGCTCTA
CCGGCTCGCGGAAGAAAGCGGGGCGGACATGGTCCAATGTTCCTATTCCCCCTTCCTTCCGGCTGAAAGCGGAGAATCGC
GCGGAATGGCTGAGGAAAAACTCCTTCATATTGAAAACACCGCCTGCGACGGCGTCTTTACGGAGAAAGGAGAAATATTC
AGGCTCTTTCTGGAAGACAGGATCACCGGCGTCGTCTGGAGCAAATTGTTCAGGCGGATACTCCCCGGCTGTTCCGCCCC
CCTGGAAGTCCGCCTGCCTTCTTCCTTCACCAGCGGAGAAGACACCCTTTACGTTTCCCGGGCCATCGCCCGCTGCCGCA
GCGTCGCCCTCACCTCTGAAAAACTCTACCACTACGGGCTGGGCGGTCCCCAATCCGTTTCTTCTCGCAACCGGAAAGCG
GAAACCCGGCCCGCAAGTTATTACGCCGTATTCGAGATGCTCACCAGGGAAAAACTCCGGGAAGGGGTTCTGGGCAGCAA
CCGCACGGCCTACATGAATTATATTGTCCCCCTGCTTTTTCCGGACAATGAAATGCCGGCCGGGCGGCTCAGGCATTGGG
CGGAACTCTGGCGGGAGGCGGACATCACTTCCGAACACGTTTGCGGGATGCCCAGGGAACAGAGGGCTTATCTTGAGGCC
GCCCTGGCCGGACGGTGGATTTACCTGCGCCTCCTTCAATGCTTCTGGAAGTTCAAGACCGCCAGAAGGAAAATGTTTCG
GCTGAGGTTTTCCAAAAACGGAATAGACACGCTCCAAATCCTCGGATACACTCTTTATTCTGCAAAGAAGCTCCCCCGAT
CATCCCTGTAA

Upstream 100 bases:

>100_bases
TCTGGTTCAACAGGGAGGAAGGCGACCGGTACCATACGGATGACGCGCTCATCCCCGGCTCATGGCTCCGGATATAACCC
CGTTTCCTATACAGCAGACC

Downstream 100 bases:

>100_bases
CTGCTGTTTTTCCCGTGTTCATCTATTCCTACCAGCAACACGACCACCTCCTGCCCGGCAATGACAGAATGCTGGTGATC
GGCAGTTCCGCTCTGGCAAA

Product: glycosyl transferase family 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MPLPSPLISVIVPIYNMEPLLPRCLDSLAAQTLRDLEIICVDDGSTDGSGGIVRKYASGDSRFRLITQENSGRAEARNAG
IRAAAAPYLGFADPDDYVEPDMYERLYRLAEESGADMVQCSYSPFLPAESGESRGMAEEKLLHIENTACDGVFTEKGEIF
RLFLEDRITGVVWSKLFRRILPGCSAPLEVRLPSSFTSGEDTLYVSRAIARCRSVALTSEKLYHYGLGGPQSVSSRNRKA
ETRPASYYAVFEMLTREKLREGVLGSNRTAYMNYIVPLLFPDNEMPAGRLRHWAELWREADITSEHVCGMPREQRAYLEA
ALAGRWIYLRLLQCFWKFKTARRKMFRLRFSKNGIDTLQILGYTLYSAKKLPRSSL

Sequences:

>Translated_376_residues
MPLPSPLISVIVPIYNMEPLLPRCLDSLAAQTLRDLEIICVDDGSTDGSGGIVRKYASGDSRFRLITQENSGRAEARNAG
IRAAAAPYLGFADPDDYVEPDMYERLYRLAEESGADMVQCSYSPFLPAESGESRGMAEEKLLHIENTACDGVFTEKGEIF
RLFLEDRITGVVWSKLFRRILPGCSAPLEVRLPSSFTSGEDTLYVSRAIARCRSVALTSEKLYHYGLGGPQSVSSRNRKA
ETRPASYYAVFEMLTREKLREGVLGSNRTAYMNYIVPLLFPDNEMPAGRLRHWAELWREADITSEHVCGMPREQRAYLEA
ALAGRWIYLRLLQCFWKFKTARRKMFRLRFSKNGIDTLQILGYTLYSAKKLPRSSL
>Mature_375_residues
PLPSPLISVIVPIYNMEPLLPRCLDSLAAQTLRDLEIICVDDGSTDGSGGIVRKYASGDSRFRLITQENSGRAEARNAGI
RAAAAPYLGFADPDDYVEPDMYERLYRLAEESGADMVQCSYSPFLPAESGESRGMAEEKLLHIENTACDGVFTEKGEIFR
LFLEDRITGVVWSKLFRRILPGCSAPLEVRLPSSFTSGEDTLYVSRAIARCRSVALTSEKLYHYGLGGPQSVSSRNRKAE
TRPASYYAVFEMLTREKLREGVLGSNRTAYMNYIVPLLFPDNEMPAGRLRHWAELWREADITSEHVCGMPREQRAYLEAA
LAGRWIYLRLLQCFWKFKTARRKMFRLRFSKNGIDTLQILGYTLYSAKKLPRSSL

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=258, Percent_Identity=32.5581395348837, Blast_Score=112, Evalue=5e-26,
Organism=Escherichia coli, GI1786560, Length=119, Percent_Identity=40.3361344537815, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 42476; Mature: 42345

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLPSPLISVIVPIYNMEPLLPRCLDSLAAQTLRDLEIICVDDGSTDGSGGIVRKYASGD
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEECCCC
SRFRLITQENSGRAEARNAGIRAAAAPYLGFADPDDYVEPDMYERLYRLAEESGADMVQC
CEEEEEEECCCCCHHHHHCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEE
SYSPFLPAESGESRGMAEEKLLHIENTACDGVFTEKGEIFRLFLEDRITGVVWSKLFRRI
CCCCCCCCCCCCCCCCHHHHHEEECCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHH
LPGCSAPLEVRLPSSFTSGEDTLYVSRAIARCRSVALTSEKLYHYGLGGPQSVSSRNRKA
CCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCC
ETRPASYYAVFEMLTREKLREGVLGSNRTAYMNYIVPLLFPDNEMPAGRLRHWAELWREA
CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHC
DITSEHVCGMPREQRAYLEAALAGRWIYLRLLQCFWKFKTARRKMFRLRFSKNGIDTLQI
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LGYTLYSAKKLPRSSL
HHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PLPSPLISVIVPIYNMEPLLPRCLDSLAAQTLRDLEIICVDDGSTDGSGGIVRKYASGD
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEECCCC
SRFRLITQENSGRAEARNAGIRAAAAPYLGFADPDDYVEPDMYERLYRLAEESGADMVQC
CEEEEEEECCCCCHHHHHCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEE
SYSPFLPAESGESRGMAEEKLLHIENTACDGVFTEKGEIFRLFLEDRITGVVWSKLFRRI
CCCCCCCCCCCCCCCCHHHHHEEECCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHH
LPGCSAPLEVRLPSSFTSGEDTLYVSRAIARCRSVALTSEKLYHYGLGGPQSVSSRNRKA
CCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCC
ETRPASYYAVFEMLTREKLREGVLGSNRTAYMNYIVPLLFPDNEMPAGRLRHWAELWREA
CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHC
DITSEHVCGMPREQRAYLEAALAGRWIYLRLLQCFWKFKTARRKMFRLRFSKNGIDTLQI
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LGYTLYSAKKLPRSSL
HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]