Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is 187735401
Identifier: 187735401
GI number: 187735401
Start: 1073416
End: 1074588
Strand: Direct
Name: 187735401
Synonym: Amuc_0899
Alternate gene names: NA
Gene position: 1073416-1074588 (Clockwise)
Preceding gene: 187735400
Following gene: 187735406
Centisome position: 40.29
GC content: 56.1
Gene sequence:
>1173_bases ATGAAATGCCTTTTATTTGCTGTGCTGGCGTGGTGCGGCGCGGTTTGTGCGCCGGCGGAGGAATATGCCTTTCCGGGGGA ACGGGAATGGATTTCCAAATTTGGAGATGTGGTGAAGGGCAGATTCCATTCCTGCACAGGGGCCGGGGCAGTTCTGAAAA TAGGGCGAAGGCATGTGGAAATTCCGTTAACCCGTCTGGATGAGGAAGACGCTGCGCTTGCGGCTTCTCTGACGGGAGCG GAGGCGCGCCGGAACCTGAAACTGGCCGCGATGCTTTGGCCTTTCCTGATGAAGGAACTGCAGAAGGTGACGTGGACGCC GGCAGAAAAGAATATCTCGCCCCGGTATCATGAAATGGCCCGGAAGAAGAATGCCGGAGCTTTAACGGGAACCAGAAAAG TGGATGGACTGGTTTGTGCCACATCGCTTTCCATCATTCAGGGACCTCCGTTCCGTATCCGGGAATACTTCCGTCCGCAG GCGCGTCCGGAAAGCGGCAGGGGACAGAAGAATTTCGATGTGGTTCTGGAGCAGGGGAGCCGCTGCGCTTATTATGATAT GGATAAGGGTGTTCTTATTCCCTCCAAATGCCTGTCTGAGGAACGGACGGAAATGCGCGCTCCCGTTTCCTCTCTGCTTC CTCCGGCAGAACAGCTTGCCGCGAGAGAATCAAAAAATTACAGGAATGCGGATTACTCCCTGCTTGTGGAAAACCGCCCC GTCAAGGGAGCCTATGAAACGTGCAAGCCCAATTCCCTGGGAAGAAAAAAGCTGGTCATGTACTGGAATACGGAGGGTGA AATGGTTTGCGGCGTCATGAAGCTGGACTACGACAACATGCGCGTGGCCGCGTTATTCGATGGACGGCGGAAGCTGATGA ACGCCCCTGGGCTTGGATATGCCGTGATTCTTTCCCGGCTGGATAAAAAAGGCAGGGGCTTGAAGGAGAAAGGCCGTTAC TACCATGTGGCGCTGGCTGCAGACGGCCTGCCCGTGTATTATCATGAGGGCCCGGAAGATGAGGCCGCCATGAACCCGCT GCTTTACGGGAAACTACGCGATTCCGAGAAAAAGGCGGCTCTGGCGGAGGAGAAAAGACGTGAACAGGCATTCCGGGCCA GGCGGGAAGCCCGGCGGCGCCTGGTGGAATCCGCCAGGAAGCGTAATACCTGA
Upstream 100 bases:
>100_bases CATTCCGCCGGGAACGAAGATTGGGAAAAGAGCCGGGAAAAAGCTTCTTCCCGGCTGTTCCCGTATGTTAGCTTGAAAGC GCACCCCTGGATTCCTGACG
Downstream 100 bases:
>100_bases AAATAGTTCCTGTCTTTTCGCGACGGGTATCCTTCTTTTCTGGAGAGCGTTCGTGAATGTTCTTCTCAGGAGCGCTGCCC TGGCGTATTTCCGGATTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MKCLLFAVLAWCGAVCAPAEEYAFPGEREWISKFGDVVKGRFHSCTGAGAVLKIGRRHVEIPLTRLDEEDAALAASLTGA EARRNLKLAAMLWPFLMKELQKVTWTPAEKNISPRYHEMARKKNAGALTGTRKVDGLVCATSLSIIQGPPFRIREYFRPQ ARPESGRGQKNFDVVLEQGSRCAYYDMDKGVLIPSKCLSEERTEMRAPVSSLLPPAEQLAARESKNYRNADYSLLVENRP VKGAYETCKPNSLGRKKLVMYWNTEGEMVCGVMKLDYDNMRVAALFDGRRKLMNAPGLGYAVILSRLDKKGRGLKEKGRY YHVALAADGLPVYYHEGPEDEAAMNPLLYGKLRDSEKKAALAEEKRREQAFRARREARRRLVESARKRNT
Sequences:
>Translated_390_residues MKCLLFAVLAWCGAVCAPAEEYAFPGEREWISKFGDVVKGRFHSCTGAGAVLKIGRRHVEIPLTRLDEEDAALAASLTGA EARRNLKLAAMLWPFLMKELQKVTWTPAEKNISPRYHEMARKKNAGALTGTRKVDGLVCATSLSIIQGPPFRIREYFRPQ ARPESGRGQKNFDVVLEQGSRCAYYDMDKGVLIPSKCLSEERTEMRAPVSSLLPPAEQLAARESKNYRNADYSLLVENRP VKGAYETCKPNSLGRKKLVMYWNTEGEMVCGVMKLDYDNMRVAALFDGRRKLMNAPGLGYAVILSRLDKKGRGLKEKGRY YHVALAADGLPVYYHEGPEDEAAMNPLLYGKLRDSEKKAALAEEKRREQAFRARREARRRLVESARKRNT >Mature_390_residues MKCLLFAVLAWCGAVCAPAEEYAFPGEREWISKFGDVVKGRFHSCTGAGAVLKIGRRHVEIPLTRLDEEDAALAASLTGA EARRNLKLAAMLWPFLMKELQKVTWTPAEKNISPRYHEMARKKNAGALTGTRKVDGLVCATSLSIIQGPPFRIREYFRPQ ARPESGRGQKNFDVVLEQGSRCAYYDMDKGVLIPSKCLSEERTEMRAPVSSLLPPAEQLAARESKNYRNADYSLLVENRP VKGAYETCKPNSLGRKKLVMYWNTEGEMVCGVMKLDYDNMRVAALFDGRRKLMNAPGLGYAVILSRLDKKGRGLKEKGRY YHVALAADGLPVYYHEGPEDEAAMNPLLYGKLRDSEKKAALAEEKRREQAFRARREARRRLVESARKRNT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43925; Mature: 43925
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCLLFAVLAWCGAVCAPAEEYAFPGEREWISKFGDVVKGRFHSCTGAGAVLKIGRRHVE CHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHCHHCCCCCCCHHHHHCCCEEE IPLTRLDEEDAALAASLTGAEARRNLKLAAMLWPFLMKELQKVTWTPAEKNISPRYHEMA CCHHHCCCHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH RKKNAGALTGTRKVDGLVCATSLSIIQGPPFRIREYFRPQARPESGRGQKNFDVVLEQGS HHCCCCCCCCCCHHCCEEEEHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCHHHHEECCC RCAYYDMDKGVLIPSKCLSEERTEMRAPVSSLLPPAEQLAARESKNYRNADYSLLVENRP EEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHHCCCCCCCCEEEEEECCC VKGAYETCKPNSLGRKKLVMYWNTEGEMVCGVMKLDYDNMRVAALFDGRRKLMNAPGLGY CCCCHHCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCEEEEEEEHHHHHHHCCCCCHH AVILSRLDKKGRGLKEKGRYYHVALAADGLPVYYHEGPEDEAAMNPLLYGKLRDSEKKAA HHHHHHHHHCCCCCCCCCCEEEEEEEECCCEEEECCCCCHHHHCCCHHEECCCCCHHHHH LAEEKRREQAFRARREARRRLVESARKRNT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKCLLFAVLAWCGAVCAPAEEYAFPGEREWISKFGDVVKGRFHSCTGAGAVLKIGRRHVE CHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHCHHCCCCCCCHHHHHCCCEEE IPLTRLDEEDAALAASLTGAEARRNLKLAAMLWPFLMKELQKVTWTPAEKNISPRYHEMA CCHHHCCCHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH RKKNAGALTGTRKVDGLVCATSLSIIQGPPFRIREYFRPQARPESGRGQKNFDVVLEQGS HHCCCCCCCCCCHHCCEEEEHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCHHHHEECCC RCAYYDMDKGVLIPSKCLSEERTEMRAPVSSLLPPAEQLAARESKNYRNADYSLLVENRP EEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHHCCCCCCCCEEEEEECCC VKGAYETCKPNSLGRKKLVMYWNTEGEMVCGVMKLDYDNMRVAALFDGRRKLMNAPGLGY CCCCHHCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCEEEEEEEHHHHHHHCCCCCHH AVILSRLDKKGRGLKEKGRYYHVALAADGLPVYYHEGPEDEAAMNPLLYGKLRDSEKKAA HHHHHHHHHCCCCCCCCCCEEEEEEEECCCEEEECCCCCHHHHCCCHHEECCCCCHHHHH LAEEKRREQAFRARREARRRLVESARKRNT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA