Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735406
Identifier: 187735406
GI number: 187735406
Start: 1080489
End: 1081052
Strand: Direct
Name: 187735406
Synonym: Amuc_0905
Alternate gene names: NA
Gene position: 1080489-1081052 (Clockwise)
Preceding gene: 187735401
Following gene: 187735409
Centisome position: 40.56
GC content: 56.03
Gene sequence:
>564_bases ATGATGAACGCAAAAAACATCTTATCAATCATAGCGGGAGCGTTGGCGCTGGCTGCCTGTTCTGGCCCGCAGGAAGAGAA TTTGCGCATAGTTCCCCTGACCGTGCCTGCAACCGTACCCATGACCTCCTACGGACCGCACGCGAGGGTGGTCGTAGCAG GAATTGATTATACGGAGGTGCACGACGAATGGATGAATCCCGATATCATGAAAAAGGCCACCCCGGGCAATACGCGCGTG GTGATCAGCCGCGGACGCCAAAGGGGCCAGTTGATGGTGGGGGATGAGGTAGCCATGGATTTTCCCGTTTGCGTGGGTAA GGCTTCCCACCGCACGCCCGTGGGCCATTTCCGCATTACGGAAAAGGCAGTGCATCATGTTTCCAATTTGTATGATGCCT CCATGCCTTACTTCATGCGGCTGACGGACAGCGGCATTGGGATGCACGTAGGCCCTGTTTTCCAGACGCCGCAGTCCCAT GGGTGCATCCGCATGACCCGCTCTTCCTGCGTGCCGCTTTTCAAAACCGTTAAGGTAGGCACGCCCGTTACGATTGTACA GTAA
Upstream 100 bases:
>100_bases CGGCATTTTTTCTCCATGCACGCCGCAGGAATCATGGAGTGCGTCATGGAACATTGAAAATGAGTTCGCAGTATTGTCCA ACCCTGTGAAAGGTTTCAAG
Downstream 100 bases:
>100_bases TGCCCGGAAAATTTCCGGGCGCTTTTCCGGAAGAAAAATTCCCCGCGTTTTTAAAAAACTCATTTTTTTAAACAAAAAAA CGCCGCCCGCCGCTATTTTG
Product: ErfK/YbiS/YcfS/YnhG family protein
Products: NA
Alternate protein names: ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG Family
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MMNAKNILSIIAGALALAACSGPQEENLRIVPLTVPATVPMTSYGPHARVVVAGIDYTEVHDEWMNPDIMKKATPGNTRV VISRGRQRGQLMVGDEVAMDFPVCVGKASHRTPVGHFRITEKAVHHVSNLYDASMPYFMRLTDSGIGMHVGPVFQTPQSH GCIRMTRSSCVPLFKTVKVGTPVTIVQ
Sequences:
>Translated_187_residues MMNAKNILSIIAGALALAACSGPQEENLRIVPLTVPATVPMTSYGPHARVVVAGIDYTEVHDEWMNPDIMKKATPGNTRV VISRGRQRGQLMVGDEVAMDFPVCVGKASHRTPVGHFRITEKAVHHVSNLYDASMPYFMRLTDSGIGMHVGPVFQTPQSH GCIRMTRSSCVPLFKTVKVGTPVTIVQ >Mature_187_residues MMNAKNILSIIAGALALAACSGPQEENLRIVPLTVPATVPMTSYGPHARVVVAGIDYTEVHDEWMNPDIMKKATPGNTRV VISRGRQRGQLMVGDEVAMDFPVCVGKASHRTPVGHFRITEKAVHHVSNLYDASMPYFMRLTDSGIGMHVGPVFQTPQSH GCIRMTRSSCVPLFKTVKVGTPVTIVQ
Specific function: Unknown
COG id: COG1376
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20322; Mature: 20322
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNAKNILSIIAGALALAACSGPQEENLRIVPLTVPATVPMTSYGPHARVVVAGIDYTEV CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCHHHH HDEWMNPDIMKKATPGNTRVVISRGRQRGQLMVGDEVAMDFPVCVGKASHRTPVGHFRIT HHHHCCCCHHHCCCCCCEEEEEECCCCCCCEEECCCCEECCCEEECCCCCCCCCCEEEEH EKAVHHVSNLYDASMPYFMRLTDSGIGMHVGPVFQTPQSHGCIRMTRSSCVPLFKTVKVG HHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCCCCCCCCCEEEEECCCCCCHHEEEECC TPVTIVQ CCEEEEC >Mature Secondary Structure MMNAKNILSIIAGALALAACSGPQEENLRIVPLTVPATVPMTSYGPHARVVVAGIDYTEV CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCHHHH HDEWMNPDIMKKATPGNTRVVISRGRQRGQLMVGDEVAMDFPVCVGKASHRTPVGHFRIT HHHHCCCCHHHCCCCCCEEEEEECCCCCCCEEECCCCEECCCEEECCCCCCCCCCEEEEH EKAVHHVSNLYDASMPYFMRLTDSGIGMHVGPVFQTPQSHGCIRMTRSSCVPLFKTVKVG HHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCCCCCCCCCEEEEECCCCCCHHEEEECC TPVTIVQ CCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA