Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735406

Identifier: 187735406

GI number: 187735406

Start: 1080489

End: 1081052

Strand: Direct

Name: 187735406

Synonym: Amuc_0905

Alternate gene names: NA

Gene position: 1080489-1081052 (Clockwise)

Preceding gene: 187735401

Following gene: 187735409

Centisome position: 40.56

GC content: 56.03

Gene sequence:

>564_bases
ATGATGAACGCAAAAAACATCTTATCAATCATAGCGGGAGCGTTGGCGCTGGCTGCCTGTTCTGGCCCGCAGGAAGAGAA
TTTGCGCATAGTTCCCCTGACCGTGCCTGCAACCGTACCCATGACCTCCTACGGACCGCACGCGAGGGTGGTCGTAGCAG
GAATTGATTATACGGAGGTGCACGACGAATGGATGAATCCCGATATCATGAAAAAGGCCACCCCGGGCAATACGCGCGTG
GTGATCAGCCGCGGACGCCAAAGGGGCCAGTTGATGGTGGGGGATGAGGTAGCCATGGATTTTCCCGTTTGCGTGGGTAA
GGCTTCCCACCGCACGCCCGTGGGCCATTTCCGCATTACGGAAAAGGCAGTGCATCATGTTTCCAATTTGTATGATGCCT
CCATGCCTTACTTCATGCGGCTGACGGACAGCGGCATTGGGATGCACGTAGGCCCTGTTTTCCAGACGCCGCAGTCCCAT
GGGTGCATCCGCATGACCCGCTCTTCCTGCGTGCCGCTTTTCAAAACCGTTAAGGTAGGCACGCCCGTTACGATTGTACA
GTAA

Upstream 100 bases:

>100_bases
CGGCATTTTTTCTCCATGCACGCCGCAGGAATCATGGAGTGCGTCATGGAACATTGAAAATGAGTTCGCAGTATTGTCCA
ACCCTGTGAAAGGTTTCAAG

Downstream 100 bases:

>100_bases
TGCCCGGAAAATTTCCGGGCGCTTTTCCGGAAGAAAAATTCCCCGCGTTTTTAAAAAACTCATTTTTTTAAACAAAAAAA
CGCCGCCCGCCGCTATTTTG

Product: ErfK/YbiS/YcfS/YnhG family protein

Products: NA

Alternate protein names: ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG Family

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MMNAKNILSIIAGALALAACSGPQEENLRIVPLTVPATVPMTSYGPHARVVVAGIDYTEVHDEWMNPDIMKKATPGNTRV
VISRGRQRGQLMVGDEVAMDFPVCVGKASHRTPVGHFRITEKAVHHVSNLYDASMPYFMRLTDSGIGMHVGPVFQTPQSH
GCIRMTRSSCVPLFKTVKVGTPVTIVQ

Sequences:

>Translated_187_residues
MMNAKNILSIIAGALALAACSGPQEENLRIVPLTVPATVPMTSYGPHARVVVAGIDYTEVHDEWMNPDIMKKATPGNTRV
VISRGRQRGQLMVGDEVAMDFPVCVGKASHRTPVGHFRITEKAVHHVSNLYDASMPYFMRLTDSGIGMHVGPVFQTPQSH
GCIRMTRSSCVPLFKTVKVGTPVTIVQ
>Mature_187_residues
MMNAKNILSIIAGALALAACSGPQEENLRIVPLTVPATVPMTSYGPHARVVVAGIDYTEVHDEWMNPDIMKKATPGNTRV
VISRGRQRGQLMVGDEVAMDFPVCVGKASHRTPVGHFRITEKAVHHVSNLYDASMPYFMRLTDSGIGMHVGPVFQTPQSH
GCIRMTRSSCVPLFKTVKVGTPVTIVQ

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20322; Mature: 20322

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNAKNILSIIAGALALAACSGPQEENLRIVPLTVPATVPMTSYGPHARVVVAGIDYTEV
CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCHHHH
HDEWMNPDIMKKATPGNTRVVISRGRQRGQLMVGDEVAMDFPVCVGKASHRTPVGHFRIT
HHHHCCCCHHHCCCCCCEEEEEECCCCCCCEEECCCCEECCCEEECCCCCCCCCCEEEEH
EKAVHHVSNLYDASMPYFMRLTDSGIGMHVGPVFQTPQSHGCIRMTRSSCVPLFKTVKVG
HHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCCCCCCCCCEEEEECCCCCCHHEEEECC
TPVTIVQ
CCEEEEC
>Mature Secondary Structure
MMNAKNILSIIAGALALAACSGPQEENLRIVPLTVPATVPMTSYGPHARVVVAGIDYTEV
CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCHHHH
HDEWMNPDIMKKATPGNTRVVISRGRQRGQLMVGDEVAMDFPVCVGKASHRTPVGHFRIT
HHHHCCCCHHHCCCCCCEEEEEECCCCCCCEEECCCCEECCCEEECCCCCCCCCCEEEEH
EKAVHHVSNLYDASMPYFMRLTDSGIGMHVGPVFQTPQSHGCIRMTRSSCVPLFKTVKVG
HHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCCCCCCCCCEEEEECCCCCCHHEEEECC
TPVTIVQ
CCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA