Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is zraS [H]
Identifier: 187735360
GI number: 187735360
Start: 1022954
End: 1024396
Strand: Reverse
Name: zraS [H]
Synonym: Amuc_0858
Alternate gene names: 187735360
Gene position: 1024396-1022954 (Counterclockwise)
Preceding gene: 187735361
Following gene: 187735359
Centisome position: 38.45
GC content: 53.92
Gene sequence:
>1443_bases ATGATCATTGAACAGGAAGAATTCCAGAAAAAACTAAAACGCATCAATCTGGCGTACTTCTCCGATCCGGACCGCATTAT TACCATCAGCAGGGGAAACAGCGTCGTCCGCCAGGGGGAACAGAACAAAAGGCTTTACCTGATTTTATCCGGCAGCGTGG TTTCCTACCGCCACGTCGTTAAAGAAGACCCGGAAACAGCTTCCACTTCCCACAAAATCTACAAGGCGTTCCGGGCCGGT CCCGGAGACTATTTGGGAGTGCAGAGTTTCTTTTCCGGATGGTTCCGCAGCTCCTCCGATCTCATTGCGGAAACTGATTT GGAACTGGCCTATATCGACACCGCCACCCCTGCCGTGGACGTGGAACACTACGGCACGCTCCTGGAACAGTTTGTTCCCG CCATTGTCCATGAACTGGCGGCGCGCAATACCCGCGTCTTTGACCGCACTGCGGAAAAGGAAGAAGCGCTGCGGATGCTC CACCGTTCTGAAATGGCCGCCACCCTGGGGCAATTATCCGCTGGAATAGCCCATGAGCTCAACAATTCCCTGGGAGTCCT GTCCCGTAAAACAGACTTTGTTCTGGAAACCCTGGACAACATGTTCCGCCAGGAAAACGCCTTCCGCTACACCCTGTACA ACAAAGGGTTGGAAGGGGCTTCCTCCTCATCCACTTCCGAACAGCGCAGGCTGGCGCGCCAGTTTGAAAAAAATTACGGG CTTTCCCAGGACGTGGCCAAGGCCCTGGCCCTGATTCCGGACATACAGAATCAGCCGGAGCTGCTGAACAAGCCATTCCT CAGCCAGCTGGAACAAAACCTCCCTTATTGGGAATTGGGACACGACCTGCACGATATGAAACTGGCTGTCAGGCATGCTA CAGCCATTGTCCGTTCCGTTCGCCTGCTGGGAGGAGGCAACACCAGACGGGAAGAAGGCGTAAACGTGACGGACTCCCTT ACGGAAGCTGTTGCTCTGGTCAAGTCCAGTCTGCGAGGCGTTGATTTTGAAATGGTCCTGCCTCCCAGAGACTCCGTGCC CGGCATCTTCGCAGATATGACGGAGCTCGTTCAAATTTGGATCAACCTGCTTCAAAACGCCTGCGACGCGCTGAAAATAG AAAATACCCCCAACCCTTCCATCCACGTAGAATGCCGGGTGGAAAAAATCAGCAGCAAGGACCAGACATCCCATACCACC CGTGAAATTCTGGTCTCCGTCACAGACAATGGCCCCGGCGTCCCAAAGGACCTGCATGAAAAAATTTTCCGTCCCAACTT CACTACCAAAAAGAAAGGTCTTTCCTTCGGCCTGGGGCTGGGGCTCACCATCGTCCGGCGCATTGTGGACAGCTACGGCG GCCGCATCCGCCTGGAGAGCGTTCCGGGCCATACCGTTTTTACGATAGTCATACCAACCATCAACAATCATGGAAAAAAT TAA
Upstream 100 bases:
>100_bases ATGATGATTCTTGCCCAATGCCATGCTTTTTAAGTAAGGTAATGTTCCATGCCGGGACATGTTGCCCCGGCATGGCCAAC ATCAACGGGAAAAGCGCCCT
Downstream 100 bases:
>100_bases CATCATTTGCGTGGACGACCAGCCGGAAGTCCTGGACAGCGTTTTGCGCGACCTTCGTCCGCTGAATTCCTGCTTCCGCC TGGAAGGGGTGGAATCCGCA
Product: cyclic nucleotide-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 480; Mature: 480
Protein sequence:
>480_residues MIIEQEEFQKKLKRINLAYFSDPDRIITISRGNSVVRQGEQNKRLYLILSGSVVSYRHVVKEDPETASTSHKIYKAFRAG PGDYLGVQSFFSGWFRSSSDLIAETDLELAYIDTATPAVDVEHYGTLLEQFVPAIVHELAARNTRVFDRTAEKEEALRML HRSEMAATLGQLSAGIAHELNNSLGVLSRKTDFVLETLDNMFRQENAFRYTLYNKGLEGASSSSTSEQRRLARQFEKNYG LSQDVAKALALIPDIQNQPELLNKPFLSQLEQNLPYWELGHDLHDMKLAVRHATAIVRSVRLLGGGNTRREEGVNVTDSL TEAVALVKSSLRGVDFEMVLPPRDSVPGIFADMTELVQIWINLLQNACDALKIENTPNPSIHVECRVEKISSKDQTSHTT REILVSVTDNGPGVPKDLHEKIFRPNFTTKKKGLSFGLGLGLTIVRRIVDSYGGRIRLESVPGHTVFTIVIPTINNHGKN
Sequences:
>Translated_480_residues MIIEQEEFQKKLKRINLAYFSDPDRIITISRGNSVVRQGEQNKRLYLILSGSVVSYRHVVKEDPETASTSHKIYKAFRAG PGDYLGVQSFFSGWFRSSSDLIAETDLELAYIDTATPAVDVEHYGTLLEQFVPAIVHELAARNTRVFDRTAEKEEALRML HRSEMAATLGQLSAGIAHELNNSLGVLSRKTDFVLETLDNMFRQENAFRYTLYNKGLEGASSSSTSEQRRLARQFEKNYG LSQDVAKALALIPDIQNQPELLNKPFLSQLEQNLPYWELGHDLHDMKLAVRHATAIVRSVRLLGGGNTRREEGVNVTDSL TEAVALVKSSLRGVDFEMVLPPRDSVPGIFADMTELVQIWINLLQNACDALKIENTPNPSIHVECRVEKISSKDQTSHTT REILVSVTDNGPGVPKDLHEKIFRPNFTTKKKGLSFGLGLGLTIVRRIVDSYGGRIRLESVPGHTVFTIVIPTINNHGKN >Mature_480_residues MIIEQEEFQKKLKRINLAYFSDPDRIITISRGNSVVRQGEQNKRLYLILSGSVVSYRHVVKEDPETASTSHKIYKAFRAG PGDYLGVQSFFSGWFRSSSDLIAETDLELAYIDTATPAVDVEHYGTLLEQFVPAIVHELAARNTRVFDRTAEKEEALRML HRSEMAATLGQLSAGIAHELNNSLGVLSRKTDFVLETLDNMFRQENAFRYTLYNKGLEGASSSSTSEQRRLARQFEKNYG LSQDVAKALALIPDIQNQPELLNKPFLSQLEQNLPYWELGHDLHDMKLAVRHATAIVRSVRLLGGGNTRREEGVNVTDSL TEAVALVKSSLRGVDFEMVLPPRDSVPGIFADMTELVQIWINLLQNACDALKIENTPNPSIHVECRVEKISSKDQTSHTT REILVSVTDNGPGVPKDLHEKIFRPNFTTKKKGLSFGLGLGLTIVRRIVDSYGGRIRLESVPGHTVFTIVIPTINNHGKN
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790300, Length=131, Percent_Identity=32.0610687022901, Blast_Score=72, Evalue=8e-14, Organism=Escherichia coli, GI1788549, Length=131, Percent_Identity=35.1145038167939, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1790436, Length=163, Percent_Identity=28.2208588957055, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 53740; Mature: 53740
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: PS50042 CNMP_BINDING_3 ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIEQEEFQKKLKRINLAYFSDPDRIITISRGNSVVRQGEQNKRLYLILSGSVVSYRHVV CCCCHHHHHHHHHHCCCEEECCCCCEEEEECCCHHHHCCCCCCEEEEEECCCHHHHHHHH KEDPETASTSHKIYKAFRAGPGDYLGVQSFFSGWFRSSSDLIAETDLELAYIDTATPAVD HCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEECCCEEEEEECCCCCCC VEHYGTLLEQFVPAIVHELAARNTRVFDRTAEKEEALRMLHRSEMAATLGQLSAGIAHEL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NNSLGVLSRKTDFVLETLDNMFRQENAFRYTLYNKGLEGASSSSTSEQRRLARQFEKNYG CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC LSQDVAKALALIPDIQNQPELLNKPFLSQLEQNLPYWELGHDLHDMKLAVRHATAIVRSV CCHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHH RLLGGGNTRREEGVNVTDSLTEAVALVKSSLRGVDFEMVLPPRDSVPGIFADMTELVQIW HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHH INLLQNACDALKIENTPNPSIHVECRVEKISSKDQTSHTTREILVSVTDNGPGVPKDLHE HHHHHHHHHHEEECCCCCCCEEEEEEEEECCCCCCCHHHHHHEEEEECCCCCCCCHHHHH KIFRPNFTTKKKGLSFGLGLGLTIVRRIVDSYGGRIRLESVPGHTVFTIVIPTINNHGKN HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEECCCCCCCC >Mature Secondary Structure MIIEQEEFQKKLKRINLAYFSDPDRIITISRGNSVVRQGEQNKRLYLILSGSVVSYRHVV CCCCHHHHHHHHHHCCCEEECCCCCEEEEECCCHHHHCCCCCCEEEEEECCCHHHHHHHH KEDPETASTSHKIYKAFRAGPGDYLGVQSFFSGWFRSSSDLIAETDLELAYIDTATPAVD HCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEECCCEEEEEECCCCCCC VEHYGTLLEQFVPAIVHELAARNTRVFDRTAEKEEALRMLHRSEMAATLGQLSAGIAHEL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NNSLGVLSRKTDFVLETLDNMFRQENAFRYTLYNKGLEGASSSSTSEQRRLARQFEKNYG CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC LSQDVAKALALIPDIQNQPELLNKPFLSQLEQNLPYWELGHDLHDMKLAVRHATAIVRSV CCHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHH RLLGGGNTRREEGVNVTDSLTEAVALVKSSLRGVDFEMVLPPRDSVPGIFADMTELVQIW HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHH INLLQNACDALKIENTPNPSIHVECRVEKISSKDQTSHTTREILVSVTDNGPGVPKDLHE HHHHHHHHHHEEECCCCCCCEEEEEEEEECCCCCCCHHHHHHEEEEECCCCCCCCHHHHH KIFRPNFTTKKKGLSFGLGLGLTIVRRIVDSYGGRIRLESVPGHTVFTIVIPTINNHGKN HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]