Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735289
Identifier: 187735289
GI number: 187735289
Start: 922410
End: 923450
Strand: Direct
Name: 187735289
Synonym: Amuc_0786
Alternate gene names: NA
Gene position: 922410-923450 (Clockwise)
Preceding gene: 187735288
Following gene: 187735290
Centisome position: 34.62
GC content: 61.77
Gene sequence:
>1041_bases ATGAACATCCTTATCATCGGCCAGGGAATTGCCGGAAGTTGTCTGGCGTGGGAATTGAAACGCCGCGGCGCGGAGTTTAC GGTTGCAGACCGCCCCGTAGCGGAAACGGCCTCCCGGGTGGCGGCCGGATTGGTAAACCCCCTGACGGGCCGCGCCTTCC GCCCCGGATGGAGGCAGGAAGAATGCCTGGCGGCGGCAGAGGCCTTTTACCCGGAGACGGAACGGGAATTAGGCGGGTCC TGGTGGCAGAAAACTCCGATTTTCCGGGAAGTGGAGACGGAAGACCAGTTTGAAATCTGGCAGGAACGCCAGACGGCTCC GGAATCCTGCGCCTATGCCGGACCTCTTTTTCCATGGCCGGAACACTGGGAAGGCCGCGGGAAAGCCGCCTATACGCGAG GTTCCGCCGTGCTGCACGTGGAAAACATGGTCACTGCTATGCGGCGTTTTTTTATGGAACAGGGCCGTTTTGTGGAAGCG GATGTATCCCCCACAGATATCCGGCCGGATGCAAACGGTCTTTTCCATTGGAACGGTCGCACGTTTTCCCACATAGTCTG GTGTACCGGCTGGGAAGCCGGGCTTCATCCGGACATGTCTCCGCTGAAGGGGCGCCCCTCCAAAGGAACCATTCTGGACT TGGACTTGAAAGAGCTGGACTGGCATGCCGGCATCCTGCATTTCGGACACTGGCTGGTTCATAACGGTTCTTTCTGGCGC TTCGGGGCCACCTACGCGTGGGCGTGGGATGCTCCCGGCATTCCGGAAGCCCCCGCCGTCCAGGAATTGATGCTGGACCT TGTTAAACGCTATTCCGGGAACATGGACGTCATCCGCGCCCGTGCCGCCGTCCGCCCCATCATCCGCCGCAGCCAACCGG TCGCCGGTCCCATTCCCGGGCTGGACGGTCAGTTCGTCTTCTCCGGGCTGGGCAGCAAGGGGGTGACCACTTCCCCCTGG TCCGCCGCCCAGCTTGCCGGACATCTCGTGTGCGGAACGGATCTGCCGCCGGATCTGCTACCTGCCGCGCTCTGGAAATG A
Upstream 100 bases:
>100_bases GGACACCTGCGGCACGCCTTTCCTCCGGGGGGAGCGGTACCGCCTCCCCTCCGCTTTCCTCTTTCATTTCCGGGATTTTC CGGTTCTTTATCCATCTATC
Downstream 100 bases:
>100_bases TACGGAACATCAGCTGTCCTTCCTTGAACGGAACAGCTATTTTCCTTGTCAAAAGGTTCTGAACGCGATTACATGCGGCC TAATATGCGAGCGGAGAACG
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: rRNA Methylase Family; Glycine/D-Amino Acid Oxidase; Fad Dependent Oxidoreductase; D-Amino Acid Dehydrogenase Small Subunit; Glycine/D-Amino Acid Oxidases Family Protein
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MNILIIGQGIAGSCLAWELKRRGAEFTVADRPVAETASRVAAGLVNPLTGRAFRPGWRQEECLAAAEAFYPETERELGGS WWQKTPIFREVETEDQFEIWQERQTAPESCAYAGPLFPWPEHWEGRGKAAYTRGSAVLHVENMVTAMRRFFMEQGRFVEA DVSPTDIRPDANGLFHWNGRTFSHIVWCTGWEAGLHPDMSPLKGRPSKGTILDLDLKELDWHAGILHFGHWLVHNGSFWR FGATYAWAWDAPGIPEAPAVQELMLDLVKRYSGNMDVIRARAAVRPIIRRSQPVAGPIPGLDGQFVFSGLGSKGVTTSPW SAAQLAGHLVCGTDLPPDLLPAALWK
Sequences:
>Translated_346_residues MNILIIGQGIAGSCLAWELKRRGAEFTVADRPVAETASRVAAGLVNPLTGRAFRPGWRQEECLAAAEAFYPETERELGGS WWQKTPIFREVETEDQFEIWQERQTAPESCAYAGPLFPWPEHWEGRGKAAYTRGSAVLHVENMVTAMRRFFMEQGRFVEA DVSPTDIRPDANGLFHWNGRTFSHIVWCTGWEAGLHPDMSPLKGRPSKGTILDLDLKELDWHAGILHFGHWLVHNGSFWR FGATYAWAWDAPGIPEAPAVQELMLDLVKRYSGNMDVIRARAAVRPIIRRSQPVAGPIPGLDGQFVFSGLGSKGVTTSPW SAAQLAGHLVCGTDLPPDLLPAALWK >Mature_346_residues MNILIIGQGIAGSCLAWELKRRGAEFTVADRPVAETASRVAAGLVNPLTGRAFRPGWRQEECLAAAEAFYPETERELGGS WWQKTPIFREVETEDQFEIWQERQTAPESCAYAGPLFPWPEHWEGRGKAAYTRGSAVLHVENMVTAMRRFFMEQGRFVEA DVSPTDIRPDANGLFHWNGRTFSHIVWCTGWEAGLHPDMSPLKGRPSKGTILDLDLKELDWHAGILHFGHWLVHNGSFWR FGATYAWAWDAPGIPEAPAVQELMLDLVKRYSGNMDVIRARAAVRPIIRRSQPVAGPIPGLDGQFVFSGLGSKGVTTSPW SAAQLAGHLVCGTDLPPDLLPAALWK
Specific function: Unknown
COG id: COG0665
COG function: function code E; Glycine/D-amino acid oxidases (deaminating)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38465; Mature: 38465
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILIIGQGIAGSCLAWELKRRGAEFTVADRPVAETASRVAAGLVNPLTGRAFRPGWRQE CEEEEEECCCCCCHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHH ECLAAAEAFYPETERELGGSWWQKTPIFREVETEDQFEIWQERQTAPESCAYAGPLFPWP HHHHHHHHHCCHHHHHHCCCHHHCCCCCEECCCCHHHHHHHHHCCCCHHHCCCCCCCCCC EHWEGRGKAAYTRGSAVLHVENMVTAMRRFFMEQGRFVEADVSPTDIRPDANGLFHWNGR CCCCCCCCEEEECCCEEEEHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEECCC TFSHIVWCTGWEAGLHPDMSPLKGRPSKGTILDLDLKELDWHAGILHFGHWLVHNGSFWR CEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHEEEECCCEEE FGATYAWAWDAPGIPEAPAVQELMLDLVKRYSGNMDVIRARAAVRPIIRRSQPVAGPIPG ECCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCC LDGQFVFSGLGSKGVTTSPWSAAQLAGHLVCGTDLPPDLLPAALWK CCCCCCEECCCCCCCCCCCCCHHHHHCEEEECCCCCHHHHHHHHCC >Mature Secondary Structure MNILIIGQGIAGSCLAWELKRRGAEFTVADRPVAETASRVAAGLVNPLTGRAFRPGWRQE CEEEEEECCCCCCHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHH ECLAAAEAFYPETERELGGSWWQKTPIFREVETEDQFEIWQERQTAPESCAYAGPLFPWP HHHHHHHHHCCHHHHHHCCCHHHCCCCCEECCCCHHHHHHHHHCCCCHHHCCCCCCCCCC EHWEGRGKAAYTRGSAVLHVENMVTAMRRFFMEQGRFVEADVSPTDIRPDANGLFHWNGR CCCCCCCCEEEECCCEEEEHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEECCC TFSHIVWCTGWEAGLHPDMSPLKGRPSKGTILDLDLKELDWHAGILHFGHWLVHNGSFWR CEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHEEEECCCEEE FGATYAWAWDAPGIPEAPAVQELMLDLVKRYSGNMDVIRARAAVRPIIRRSQPVAGPIPG ECCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCC LDGQFVFSGLGSKGVTTSPWSAAQLAGHLVCGTDLPPDLLPAALWK CCCCCCEECCCCCCCCCCCCCHHHHHCEEEECCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA