Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is gluP [H]
Identifier: 187735290
GI number: 187735290
Start: 923535
End: 924410
Strand: Direct
Name: gluP [H]
Synonym: Amuc_0787
Alternate gene names: 187735290
Gene position: 923535-924410 (Clockwise)
Preceding gene: 187735289
Following gene: 187735291
Centisome position: 34.67
GC content: 54.45
Gene sequence:
>876_bases ATGCGAGCGGAGAACGAGAACTGGGGAGATACGGTACGGAATCATCTGTTTGACCAGCGCAGCGCCGTCATGGTGCACTG GCTGATTCTGCTCAATGTAGTCATCTTTATCCTGGGATTCTTCTTCCAAGTGGACATCCCAAGGAATATTTACCCGCCTG TCCATTTGGACTTGATCCAGCTTTACGGAGCTTACAGCGAATATACGTGCTTTCACGAGGGGGAATTATGGCGGTTGCTT ACCTATCAGTTTCTTCACGCCAATCTGGGGCACATCATGTTCAACATGATTGCCCTGTGGTTTTTCGGCCCGGTTGTAGA AGAACGTTTCGGCCATTGGCGCTTCCTGCTGTATTACCTGTTTTGCGGCGTGGCTGCAGCCCTGTTTTCCTCCCTGCTGG GGTACATGGGATTTTTTGATCCGGAATGGCGCTTCATTCCCATGGTGGGGGCCTCAGGTTCCATTTACGGCATCATGGCC GCATGCGCGGTGCTCTTTCCCCATGCCCGGGTACAGCTTCTGTTTCCTCCGGTTAATTTGAGCGTGCGCCAGTTTGCCCT GGCCGTTCTCGGAGTCGCCGCAGCCGTCATTATCTTCCAATGGAACAATGCGGGCGGGGAAGCCGGCCATCTGGGCGGCA TGTTCGCCGGATTTATTCTGACATTGCTGATTTTATGGAAGGAAAAGATGTCTTCCCCAAGACGGAAAGCCGCCTCTTCT TCCCACTATTCCCCTGAGCCTTCCAGCCGCCGCCCGGCACAGGCTTACCCCTCTGAAAAGGAGGTGGATGAAATCATGGA AAAAATATCCAGGTCCGGCCTGTCCAGCCTGACGGAGGAGGAACGGGAAATTCTCCGGCGCGCTTCCCGGCGCTGA
Upstream 100 bases:
>100_bases CGCGCTCTGGAAATGATACGGAACATCAGCTGTCCTTCCTTGAACGGAACAGCTATTTTCCTTGTCAAAAGGTTCTGAAC GCGATTACATGCGGCCTAAT
Downstream 100 bases:
>100_bases ACTATTTGTTAGATATTTTTATATTTTTCGTTATTTTCCTTCCTTTTTGCCATCCATTTCCTAGCATGGATGAATGATGA CGCGACTGTATTCCTCCACC
Product: Rhomboid family protein
Products: NA
Alternate protein names: Intramembrane serine protease [H]
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MRAENENWGDTVRNHLFDQRSAVMVHWLILLNVVIFILGFFFQVDIPRNIYPPVHLDLIQLYGAYSEYTCFHEGELWRLL TYQFLHANLGHIMFNMIALWFFGPVVEERFGHWRFLLYYLFCGVAAALFSSLLGYMGFFDPEWRFIPMVGASGSIYGIMA ACAVLFPHARVQLLFPPVNLSVRQFALAVLGVAAAVIIFQWNNAGGEAGHLGGMFAGFILTLLILWKEKMSSPRRKAASS SHYSPEPSSRRPAQAYPSEKEVDEIMEKISRSGLSSLTEEEREILRRASRR
Sequences:
>Translated_291_residues MRAENENWGDTVRNHLFDQRSAVMVHWLILLNVVIFILGFFFQVDIPRNIYPPVHLDLIQLYGAYSEYTCFHEGELWRLL TYQFLHANLGHIMFNMIALWFFGPVVEERFGHWRFLLYYLFCGVAAALFSSLLGYMGFFDPEWRFIPMVGASGSIYGIMA ACAVLFPHARVQLLFPPVNLSVRQFALAVLGVAAAVIIFQWNNAGGEAGHLGGMFAGFILTLLILWKEKMSSPRRKAASS SHYSPEPSSRRPAQAYPSEKEVDEIMEKISRSGLSSLTEEEREILRRASRR >Mature_291_residues MRAENENWGDTVRNHLFDQRSAVMVHWLILLNVVIFILGFFFQVDIPRNIYPPVHLDLIQLYGAYSEYTCFHEGELWRLL TYQFLHANLGHIMFNMIALWFFGPVVEERFGHWRFLLYYLFCGVAAALFSSLLGYMGFFDPEWRFIPMVGASGSIYGIMA ACAVLFPHARVQLLFPPVNLSVRQFALAVLGVAAAVIIFQWNNAGGEAGHLGGMFAGFILTLLILWKEKMSSPRRKAASS SHYSPEPSSRRPAQAYPSEKEVDEIMEKISRSGLSSLTEEEREILRRASRR
Specific function: Rhomboid-type serine protease that catalyzes intramembrane proteolysis. Important for normal cell division and sporulation. May act as a glucose exporter [H]
COG id: COG0705
COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002610 - InterPro: IPR022764 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF01694 Rhomboid; PF00515 TPR_1 [H]
EC number: =3.4.21.105 [H]
Molecular weight: Translated: 33263; Mature: 33263
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAENENWGDTVRNHLFDQRSAVMVHWLILLNVVIFILGFFFQVDIPRNIYPPVHLDLIQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH LYGAYSEYTCFHEGELWRLLTYQFLHANLGHIMFNMIALWFFGPVVEERFGHWRFLLYYL HHCCHHHCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FCGVAAALFSSLLGYMGFFDPEWRFIPMVGASGSIYGIMAACAVLFPHARVQLLFPPVNL HHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCH SVRQFALAVLGVAAAVIIFQWNNAGGEAGHLGGMFAGFILTLLILWKEKMSSPRRKAASS HHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCC SHYSPEPSSRRPAQAYPSEKEVDEIMEKISRSGLSSLTEEEREILRRASRR CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRAENENWGDTVRNHLFDQRSAVMVHWLILLNVVIFILGFFFQVDIPRNIYPPVHLDLIQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH LYGAYSEYTCFHEGELWRLLTYQFLHANLGHIMFNMIALWFFGPVVEERFGHWRFLLYYL HHCCHHHCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FCGVAAALFSSLLGYMGFFDPEWRFIPMVGASGSIYGIMAACAVLFPHARVQLLFPPVNL HHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCH SVRQFALAVLGVAAAVIIFQWNNAGGEAGHLGGMFAGFILTLLILWKEKMSSPRRKAASS HHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCC SHYSPEPSSRRPAQAYPSEKEVDEIMEKISRSGLSSLTEEEREILRRASRR CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]