| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187735260
Identifier: 187735260
GI number: 187735260
Start: 888455
End: 889429
Strand: Reverse
Name: 187735260
Synonym: Amuc_0755
Alternate gene names: NA
Gene position: 889429-888455 (Counterclockwise)
Preceding gene: 187735261
Following gene: 187735259
Centisome position: 33.39
GC content: 57.85
Gene sequence:
>975_bases ATGCCCGCACAGCGCATTCTGATCATCAAGCATGGAGCCCTTGGCGATGTGGTGCTCGCCATGGGGACGATGAAGCGGCT CCGCGAACTTCATCCGGAGGCGCATATCACCCTGATGACCATGGGAATGTTTGTTCCCATGGCGGAGCAGCTCGGAGTGT TTGACGATTTTATTGTGGATAATCGCCTGCCTTACTGGAAGCTGGGCGCCACCTGGAGGGCCGTCCGTTCCATTGTGAAA GGAAATTTTGACGTGGTGTACGATCTTCAGGAATCTTCCCGCACCAGGAAACGCTATTATCCCGCCGTGCGCTTCCTGCT GAACCATGACATGGACTGGGTGGCCTGCAATTCCGGAGAACGGCGCAAATTGCTGAAAAAGAAAGCCTTCCGGTGGGGGA AGGTGGGACGGGAGCCGTTTCGTTTGGAACGCGTCCTGACGGATCTTTCTTTCATGCACGGGGAGGGGCTGCATTTTGAC GAGCTTCCGGAACGCTATGTGATGATGATTCCGGGCTGTTCCCCCAATCATCCCTACAAGCGCTGGCCCGTGGAGAATTT CTGCGCCCTGGCGAAACGCCTGGCGGCGCGGGGCGTGTCCTCCGTTGTCATCGGCACCCGGGCGGAGGCTGCGGAAGTGG AGGCCATTGCCGCCAGCTCTCCCCTGGCTGTCAGTTTTCTGGGCAAGTCTTCCCTGATGGATATTCCCCAGATGGCTTTG TGTTCCCTGGCTTGTGTAGGCAATGATACGGGGCCTACACATATGTGTGCCTATGCCGGGGTGCCCGTGACCGCCATTTT CTGCCACCGGACGCGCAATTCCGCCATTACTGCCCGGTGCATTTCCAACCTGGTTTCCCCCGGCGCCATTGAGGAAATTA CAGTGGACCAGGTATGGTCCGCGCTGGAGCCCTTTCTGCCGCCGCAGGAAGGATTTGAACAAATAAGGGCGGCAGATTCT CCGCATGGCTCATGA
Upstream 100 bases:
>100_bases AGCGCCCATGACTTCCCTGGAGGATGGCGTGCGCCGGTACGTGCAGGAGTATCTGGACAGGGAAGACAGTTACGTTTAAC CCGCATTCCTTTTTTCTCCC
Downstream 100 bases:
>100_bases CGGCTCCCGTAAACATTTCCGTGCTGGTTCCGGTTTACAATGTGGAGCCGTACCTGGCCCAGTGCCTGGAAAGCATTTGC TCACAGACGCTCCGTGAGCT
Product: glycosyl transferase family 9
Products: NA
Alternate protein names: Heptosyltransferase Family Protein; ADP-Heptose-LPS Heptosyltransferase; Heptosyltransferase I; ADP-Heptose Of LPS Heptosyltransferase; Lipopolysaccharide Heptosyltransferase; Lipopolysaccharide Core Biosynthesis Protein; ADP-Heptose-LPS Heptosyltransferase II; Family 9 Glycosyl Transferase
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MPAQRILIIKHGALGDVVLAMGTMKRLRELHPEAHITLMTMGMFVPMAEQLGVFDDFIVDNRLPYWKLGATWRAVRSIVK GNFDVVYDLQESSRTRKRYYPAVRFLLNHDMDWVACNSGERRKLLKKKAFRWGKVGREPFRLERVLTDLSFMHGEGLHFD ELPERYVMMIPGCSPNHPYKRWPVENFCALAKRLAARGVSSVVIGTRAEAAEVEAIAASSPLAVSFLGKSSLMDIPQMAL CSLACVGNDTGPTHMCAYAGVPVTAIFCHRTRNSAITARCISNLVSPGAIEEITVDQVWSALEPFLPPQEGFEQIRAADS PHGS
Sequences:
>Translated_324_residues MPAQRILIIKHGALGDVVLAMGTMKRLRELHPEAHITLMTMGMFVPMAEQLGVFDDFIVDNRLPYWKLGATWRAVRSIVK GNFDVVYDLQESSRTRKRYYPAVRFLLNHDMDWVACNSGERRKLLKKKAFRWGKVGREPFRLERVLTDLSFMHGEGLHFD ELPERYVMMIPGCSPNHPYKRWPVENFCALAKRLAARGVSSVVIGTRAEAAEVEAIAASSPLAVSFLGKSSLMDIPQMAL CSLACVGNDTGPTHMCAYAGVPVTAIFCHRTRNSAITARCISNLVSPGAIEEITVDQVWSALEPFLPPQEGFEQIRAADS PHGS >Mature_323_residues PAQRILIIKHGALGDVVLAMGTMKRLRELHPEAHITLMTMGMFVPMAEQLGVFDDFIVDNRLPYWKLGATWRAVRSIVKG NFDVVYDLQESSRTRKRYYPAVRFLLNHDMDWVACNSGERRKLLKKKAFRWGKVGREPFRLERVLTDLSFMHGEGLHFDE LPERYVMMIPGCSPNHPYKRWPVENFCALAKRLAARGVSSVVIGTRAEAAEVEAIAASSPLAVSFLGKSSLMDIPQMALC SLACVGNDTGPTHMCAYAGVPVTAIFCHRTRNSAITARCISNLVSPGAIEEITVDQVWSALEPFLPPQEGFEQIRAADSP HGS
Specific function: Unknown
COG id: COG0859
COG function: function code M; ADP-heptose:LPS heptosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36128; Mature: 35997
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAQRILIIKHGALGDVVLAMGTMKRLRELHPEAHITLMTMGMFVPMAEQLGVFDDFIVD CCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCHHHHHHC NRLPYWKLGATWRAVRSIVKGNFDVVYDLQESSRTRKRYYPAVRFLLNHDMDWVACNSGE CCCCCEECCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEECCCH RRKLLKKKAFRWGKVGREPFRLERVLTDLSFMHGEGLHFDELPERYVMMIPGCSPNHPYK HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEEECCCCCCCCCC RWPVENFCALAKRLAARGVSSVVIGTRAEAAEVEAIAASSPLAVSFLGKSSLMDIPQMAL CCCHHHHHHHHHHHHHCCCHHEEEECCCCHHHHHHHHCCCCEEEEECCCHHHCCCHHHHH CSLACVGNDTGPTHMCAYAGVPVTAIFCHRTRNSAITARCISNLVSPGAIEEITVDQVWS HHHHHCCCCCCCCHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH ALEPFLPPQEGFEQIRAADSPHGS HHCCCCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure PAQRILIIKHGALGDVVLAMGTMKRLRELHPEAHITLMTMGMFVPMAEQLGVFDDFIVD CCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCHHHHHHC NRLPYWKLGATWRAVRSIVKGNFDVVYDLQESSRTRKRYYPAVRFLLNHDMDWVACNSGE CCCCCEECCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEECCCH RRKLLKKKAFRWGKVGREPFRLERVLTDLSFMHGEGLHFDELPERYVMMIPGCSPNHPYK HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEEECCCCCCCCCC RWPVENFCALAKRLAARGVSSVVIGTRAEAAEVEAIAASSPLAVSFLGKSSLMDIPQMAL CCCHHHHHHHHHHHHHCCCHHEEEECCCCHHHHHHHHCCCCEEEEECCCHHHCCCHHHHH CSLACVGNDTGPTHMCAYAGVPVTAIFCHRTRNSAITARCISNLVSPGAIEEITVDQVWS HHHHHCCCCCCCCHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH ALEPFLPPQEGFEQIRAADSPHGS HHCCCCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA