Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735246
Identifier: 187735246
GI number: 187735246
Start: 876739
End: 877494
Strand: Direct
Name: 187735246
Synonym: Amuc_0741
Alternate gene names: NA
Gene position: 876739-877494 (Clockwise)
Preceding gene: 187735245
Following gene: 187735247
Centisome position: 32.91
GC content: 33.73
Gene sequence:
>756_bases ATGAAATTTCATAGGATAGTTGTTCTCATTGATGCTGATAATACCAATCTAGCTAATCTTGAAAAACTCATACAATACAT ATCCACTCGTGGACGTATTGTGGTCAAAAGAGCTTACGGTAATTGGAGTGAAAATTTAAAGGATAAGAAATCTGCACTAC AACAGTCTGGTTTTAAAACAGAGCATTATTTCAATTGTGTTCCCGGAAAAAATGCAACAGATATAGCATTAGCTATCGAC GCCGTAGATTTATTACATAAAAATTCTTACGACTCCTTTGTTATTGTTTCAAGTGATAGTGATTTTACACCTCTTTCTAT CTACCTTAAAGAATCAGGAGTTTATGTAATAGGATTTGGAAAAAGCAATGCTTCTGAAGCTTTTAGAAACGGCTGTGATG AATTTAAAGATATAGAAAAAATTCCTACTAGTGAATCAAATTCTCAACATTTGAAGAATACCGCCCCGTCTGCAACAAAA AAAGATCCTTTAGAGATAATCCATAAACATCTTCAACAATGTGCGATAGATAATAAGAAAGACGATGGGTACACATCTGC AAGCGATGCTGGTAAATATCTTCGACAGCACATCCTTGGTTTTACTCCAAAAACCTATGGATACAAGAATCTTACTAATC TTTTAGAAGACTTTCGCAATCTCTATGCTATTGAAAAACATCCAATTCCCGGTAATAAAAACTCTGTTAATGTTAGCTAT AAACTCTGTAACTCTACAAACAATTCAGAATCCTGA
Upstream 100 bases:
>100_bases AAGCCAACCCCTCAAAGGTTTTTCCCAGCATAAAGGAATTGACATTATTCCTGTCCATTGAGAAATAATTAGGAGGTCTT TTCCGACTAATAAAAACATT
Downstream 100 bases:
>100_bases TTTAATCCGTATCTGATTTCTTCCATGGATACCGGCGCCGTCATCCTCACCTCCTTTCTCTCCACCATTCCCGTTTATCT TTTCTTTGCTACGGGTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MKFHRIVVLIDADNTNLANLEKLIQYISTRGRIVVKRAYGNWSENLKDKKSALQQSGFKTEHYFNCVPGKNATDIALAID AVDLLHKNSYDSFVIVSSDSDFTPLSIYLKESGVYVIGFGKSNASEAFRNGCDEFKDIEKIPTSESNSQHLKNTAPSATK KDPLEIIHKHLQQCAIDNKKDDGYTSASDAGKYLRQHILGFTPKTYGYKNLTNLLEDFRNLYAIEKHPIPGNKNSVNVSY KLCNSTNNSES
Sequences:
>Translated_251_residues MKFHRIVVLIDADNTNLANLEKLIQYISTRGRIVVKRAYGNWSENLKDKKSALQQSGFKTEHYFNCVPGKNATDIALAID AVDLLHKNSYDSFVIVSSDSDFTPLSIYLKESGVYVIGFGKSNASEAFRNGCDEFKDIEKIPTSESNSQHLKNTAPSATK KDPLEIIHKHLQQCAIDNKKDDGYTSASDAGKYLRQHILGFTPKTYGYKNLTNLLEDFRNLYAIEKHPIPGNKNSVNVSY KLCNSTNNSES >Mature_251_residues MKFHRIVVLIDADNTNLANLEKLIQYISTRGRIVVKRAYGNWSENLKDKKSALQQSGFKTEHYFNCVPGKNATDIALAID AVDLLHKNSYDSFVIVSSDSDFTPLSIYLKESGVYVIGFGKSNASEAFRNGCDEFKDIEKIPTSESNSQHLKNTAPSATK KDPLEIIHKHLQQCAIDNKKDDGYTSASDAGKYLRQHILGFTPKTYGYKNLTNLLEDFRNLYAIEKHPIPGNKNSVNVSY KLCNSTNNSES
Specific function: Unknown
COG id: COG1432
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28149; Mature: 28149
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFHRIVVLIDADNTNLANLEKLIQYISTRGRIVVKRAYGNWSENLKDKKSALQQSGFKT CCCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCC EHYFNCVPGKNATDIALAIDAVDLLHKNSYDSFVIVSSDSDFTPLSIYLKESGVYVIGFG CCEEECCCCCCCCCEEHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEECCCEEEEEEC KSNASEAFRNGCDEFKDIEKIPTSESNSQHLKNTAPSATKKDPLEIIHKHLQQCAIDNKK CCCHHHHHHCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCC DDGYTSASDAGKYLRQHILGFTPKTYGYKNLTNLLEDFRNLYAIEKHPIPGNKNSVNVSY CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEHCCCCCCCCCCEEEEEE KLCNSTNNSES EEECCCCCCCC >Mature Secondary Structure MKFHRIVVLIDADNTNLANLEKLIQYISTRGRIVVKRAYGNWSENLKDKKSALQQSGFKT CCCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCC EHYFNCVPGKNATDIALAIDAVDLLHKNSYDSFVIVSSDSDFTPLSIYLKESGVYVIGFG CCEEECCCCCCCCCEEHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEECCCEEEEEEC KSNASEAFRNGCDEFKDIEKIPTSESNSQHLKNTAPSATKKDPLEIIHKHLQQCAIDNKK CCCHHHHHHCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCC DDGYTSASDAGKYLRQHILGFTPKTYGYKNLTNLLEDFRNLYAIEKHPIPGNKNSVNVSY CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEHCCCCCCCCCCEEEEEE KLCNSTNNSES EEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA