Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is 187735247
Identifier: 187735247
GI number: 187735247
Start: 877519
End: 878505
Strand: Direct
Name: 187735247
Synonym: Amuc_0742
Alternate gene names: NA
Gene position: 877519-878505 (Clockwise)
Preceding gene: 187735246
Following gene: 187735248
Centisome position: 32.94
GC content: 57.65
Gene sequence:
>987_bases ATGGATACCGGCGCCGTCATCCTCACCTCCTTTCTCTCCACCATTCCCGTTTATCTTTTCTTTGCTACGGGTTTCTATCT GCGCCACAAGCAAGTCATCCAGGCAGACCACGACGCGCCCATCATGCGCATCGCGATGGATGTGGCCTATCCCTGCCTCG TCTTCCACAGTATCATGAAGTACATGGTGCTCTCCGGAAATGAGACGCTCAGCAGCGTTTCCTTTTCCCTCCAGGCCATT TCAGCTGGGGCCCTGGAACTTCTGCTGGGCATCGCAGCTGCATGGCTGGTCGCTAAACTGCTGCGCATGCGCATCGGCAC GGGCCTGCGTACGTTCACCCTGACGGCGGGAGTGCAGAACTACGCTTTTTTCGTCATTCCCATCATCCAGATGCTGTTTA CCGCCGGCAACGACCCCACGCTGGGCATCCTTTTCGTCCACAATGTAGGGTGTGAACTGGTCGTCTGGAGCATCGGCGTT ATCATTATCGCAGGCGGTCCGGGCAACCTGAACATGGGCGTCTTTTTCCGCGGGCCCCTGCTGGCCGTCATCGTGGGCTT GGCGCTCGCCTGGTCCGGCCTGGGAACCTATGTGGCCCAACCGCCCCTGATGAAGACTTTTGAAATGATCGGCAACTGCG CCACGCCCCTGTGCCTGATCCTGTTCGGATGTTCCATGCGGGATTTATGGCATAACATGAAGTGGGAACCCAAACCCATC ATCTGCGGCCTGCTGACGCGGCTGGGGCTGGCCCCTGCACTGCTGCTCCTGATGGCTTATTTCCTTCCGGTGGATGATTA TATCAAGCGCGTCATCATCATCCAGGCAGCCATTCCCTCCGCCGTCATTCCGGTCATTCTGGCCAAACGTTTCGGAGGCC ATCCGGACCTGGGCACTCAAATCCTGCTGACAACGACGGTGGCTTCCTTCCTCACACTGCCCTGCTGGTTGGCTCTTGGT TCCACCCTGGTCGTACCATTGTATTAA
Upstream 100 bases:
>100_bases TCCAATTCCCGGTAATAAAAACTCTGTTAATGTTAGCTATAAACTCTGTAACTCTACAAACAATTCAGAATCCTGATTTA ATCCGTATCTGATTTCTTCC
Downstream 100 bases:
>100_bases CGGGATAATGGCGACATCAATCCCCGGATGGTCCGCGACGGCCCGCTTGCCCAACATCTTCCGCTTTTCCGGAGGATTCC ATTCCCGGTGTCCTGCCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Malate Permease; Transporter AEC Family
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MDTGAVILTSFLSTIPVYLFFATGFYLRHKQVIQADHDAPIMRIAMDVAYPCLVFHSIMKYMVLSGNETLSSVSFSLQAI SAGALELLLGIAAAWLVAKLLRMRIGTGLRTFTLTAGVQNYAFFVIPIIQMLFTAGNDPTLGILFVHNVGCELVVWSIGV IIIAGGPGNLNMGVFFRGPLLAVIVGLALAWSGLGTYVAQPPLMKTFEMIGNCATPLCLILFGCSMRDLWHNMKWEPKPI ICGLLTRLGLAPALLLLMAYFLPVDDYIKRVIIIQAAIPSAVIPVILAKRFGGHPDLGTQILLTTTVASFLTLPCWLALG STLVVPLY
Sequences:
>Translated_328_residues MDTGAVILTSFLSTIPVYLFFATGFYLRHKQVIQADHDAPIMRIAMDVAYPCLVFHSIMKYMVLSGNETLSSVSFSLQAI SAGALELLLGIAAAWLVAKLLRMRIGTGLRTFTLTAGVQNYAFFVIPIIQMLFTAGNDPTLGILFVHNVGCELVVWSIGV IIIAGGPGNLNMGVFFRGPLLAVIVGLALAWSGLGTYVAQPPLMKTFEMIGNCATPLCLILFGCSMRDLWHNMKWEPKPI ICGLLTRLGLAPALLLLMAYFLPVDDYIKRVIIIQAAIPSAVIPVILAKRFGGHPDLGTQILLTTTVASFLTLPCWLALG STLVVPLY >Mature_328_residues MDTGAVILTSFLSTIPVYLFFATGFYLRHKQVIQADHDAPIMRIAMDVAYPCLVFHSIMKYMVLSGNETLSSVSFSLQAI SAGALELLLGIAAAWLVAKLLRMRIGTGLRTFTLTAGVQNYAFFVIPIIQMLFTAGNDPTLGILFVHNVGCELVVWSIGV IIIAGGPGNLNMGVFFRGPLLAVIVGLALAWSGLGTYVAQPPLMKTFEMIGNCATPLCLILFGCSMRDLWHNMKWEPKPI ICGLLTRLGLAPALLLLMAYFLPVDDYIKRVIIIQAAIPSAVIPVILAKRFGGHPDLGTQILLTTTVASFLTLPCWLALG STLVVPLY
Specific function: Unknown
COG id: COG0679
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35529; Mature: 35529
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTGAVILTSFLSTIPVYLFFATGFYLRHKQVIQADHDAPIMRIAMDVAYPCLVFHSIMK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH YMVLSGNETLSSVSFSLQAISAGALELLLGIAAAWLVAKLLRMRIGTGLRTFTLTAGVQN HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHH YAFFVIPIIQMLFTAGNDPTLGILFVHNVGCELVVWSIGVIIIAGGPGNLNMGVFFRGPL HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEECEEEEECCCCCCCEEEEECCHH LAVIVGLALAWSGLGTYVAQPPLMKTFEMIGNCATPLCLILFGCSMRDLWHNMKWEPKPI HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCCCCCCHH ICGLLTRLGLAPALLLLMAYFLPVDDYIKRVIIIQAAIPSAVIPVILAKRFGGHPDLGTQ HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCH ILLTTTVASFLTLPCWLALGSTLVVPLY HHHHHHHHHHHHHHHHHHCCCCEEEECC >Mature Secondary Structure MDTGAVILTSFLSTIPVYLFFATGFYLRHKQVIQADHDAPIMRIAMDVAYPCLVFHSIMK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH YMVLSGNETLSSVSFSLQAISAGALELLLGIAAAWLVAKLLRMRIGTGLRTFTLTAGVQN HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHH YAFFVIPIIQMLFTAGNDPTLGILFVHNVGCELVVWSIGVIIIAGGPGNLNMGVFFRGPL HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEECEEEEECCCCCCCEEEEECCHH LAVIVGLALAWSGLGTYVAQPPLMKTFEMIGNCATPLCLILFGCSMRDLWHNMKWEPKPI HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCCCCCCHH ICGLLTRLGLAPALLLLMAYFLPVDDYIKRVIIIQAAIPSAVIPVILAKRFGGHPDLGTQ HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCH ILLTTTVASFLTLPCWLALGSTLVVPLY HHHHHHHHHHHHHHHHHHCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA