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The map label for this gene is ybaT [H]

Identifier: 187735223

GI number: 187735223

Start: 845810

End: 847114

Strand: Reverse

Name: ybaT [H]

Synonym: Amuc_0717

Alternate gene names: 187735223

Gene position: 847114-845810 (Counterclockwise)

Preceding gene: 187735228

Following gene: 187735219

Centisome position: 31.8

GC content: 53.18

Gene sequence:

>1305_bases
ATGTACGGGAAGGCCCCAAAAGAATATCTGTCCCTGTGGAGCGTCATTGCATTAGGAATAGGGTCCATGGTGGGAGCGGG
AATTTTCGCCCTCATGGGGCAGGCGACCCTGATGGCGGGAAAAAATGTATATTGGTCCTTTATTCTGGGAGGCGTTGCTG
CCCTGCTTTCCGGGTACACCTACGCCAAACTGGGTTCCCGTTATCCCGGTTCCGGAGGAATTATGGATTATTTCAACGAG
GCTTTTTCCCATAAGACCCTGTCCGGCGCACTGACCCTTATTTACCTGGGAACGCTGGTCATTACCGTGGCCCTGGTGGC
CAAATCCTTTGGAGCCTATGCGTCCCGCCTGTTTTTACCGGACAGGGCAGTCACCATTTATTCCACGGCCCTTTTTGCCA
GCGTGGCTATTTTGCTGCTGGGGGCATTGAATATGGGGGGAGCCAGGGCCGTTGGAAAGTCGGAAGTAATCATGGTGGCA
TTCAAATTATTGATTTTGACGGTTTTAATGCTTGCCAGCTTCGGTTCTTCCGTGCCTGTGGGCGCGGATCCCATTCCGGT
GAAAGGGCTGGACGGTTTGCTGGGCAGCGTGGGATTGACATTTTTCGCATTTGCCGGCTACGGAATGATGGCCAATACGG
CGGGCAATCTGAAAAATCCTTCCAGGACGCTGCCAAGAGCCATTTTTATGGCTATTGGCCTTGTGCTGGCCCTGTACCTG
ATACTCTCCTACGTAGTACTGTCCAACGTTCCCGCTACTTCCCTGGAAAGCCATACGGAAACGGCCGTAGCGCAGGCCGC
CTATCCGGTTTTGGGCATGTGGGGCTTCATGGCCGTATCCGTAGCGGCTCTCATTGCCACGGCATCAGCCATTAATGCCA
CCATGTTCAGCATGCTGGACATTTCCCGGGCTCTGGCGCGCAACGGCCAGCTGGGAGCTATTTTTAAACAGCCTTTCTGG
GGCCACGGAACGGAGGGTTTTTTCTATCTTTTGCTGGGGATTCTGGTGATGACGAATGCCTTTAACCTGGTAGCCATCGC
CAATTTGGCGGGGGCCTGTTTTCTGATCAGCTACCTGGCGGTGTTCGTCGCCCATTGGCGGCTCCGGAAAGAGACTCAGG
GAAATGCGCTGCTTATCATCCTGGGCTTTCTTCTGATGCTGTTTATTCTGGGGGCGTTCTTTTACCAGATGTTCTTCAGC
CAGCCTTACCTGATTCCGTTGATTGTGTTGTTTGTAGCCGCCTGCTTCATCCTGGAATTCCTAATACGCAGGAAGATTGC
GAAAAATGTTCCCGGAGTTTCTTGA

Upstream 100 bases:

>100_bases
GAATAGTCATGATGGGGCTGCAGGACGGATGAATAAGCAGGACGTGTCATCCCGTGCGGAAAGGTCAACGTTTCATTCCT
GTAGTATCTCTAAATCCCTT

Downstream 100 bases:

>100_bases
CCCATGGGTGCGGGAGAAAACCGGGGCTTTTTCCCGGCCTTTTAATGCAGGAAGGAAGTCAGGGGGCTGGTGGCTGTAGC
TTTGGAGGAAACGGCGGGAA

Product: amino acid permease-associated region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MYGKAPKEYLSLWSVIALGIGSMVGAGIFALMGQATLMAGKNVYWSFILGGVAALLSGYTYAKLGSRYPGSGGIMDYFNE
AFSHKTLSGALTLIYLGTLVITVALVAKSFGAYASRLFLPDRAVTIYSTALFASVAILLLGALNMGGARAVGKSEVIMVA
FKLLILTVLMLASFGSSVPVGADPIPVKGLDGLLGSVGLTFFAFAGYGMMANTAGNLKNPSRTLPRAIFMAIGLVLALYL
ILSYVVLSNVPATSLESHTETAVAQAAYPVLGMWGFMAVSVAALIATASAINATMFSMLDISRALARNGQLGAIFKQPFW
GHGTEGFFYLLLGILVMTNAFNLVAIANLAGACFLISYLAVFVAHWRLRKETQGNALLIILGFLLMLFILGAFFYQMFFS
QPYLIPLIVLFVAACFILEFLIRRKIAKNVPGVS

Sequences:

>Translated_434_residues
MYGKAPKEYLSLWSVIALGIGSMVGAGIFALMGQATLMAGKNVYWSFILGGVAALLSGYTYAKLGSRYPGSGGIMDYFNE
AFSHKTLSGALTLIYLGTLVITVALVAKSFGAYASRLFLPDRAVTIYSTALFASVAILLLGALNMGGARAVGKSEVIMVA
FKLLILTVLMLASFGSSVPVGADPIPVKGLDGLLGSVGLTFFAFAGYGMMANTAGNLKNPSRTLPRAIFMAIGLVLALYL
ILSYVVLSNVPATSLESHTETAVAQAAYPVLGMWGFMAVSVAALIATASAINATMFSMLDISRALARNGQLGAIFKQPFW
GHGTEGFFYLLLGILVMTNAFNLVAIANLAGACFLISYLAVFVAHWRLRKETQGNALLIILGFLLMLFILGAFFYQMFFS
QPYLIPLIVLFVAACFILEFLIRRKIAKNVPGVS
>Mature_434_residues
MYGKAPKEYLSLWSVIALGIGSMVGAGIFALMGQATLMAGKNVYWSFILGGVAALLSGYTYAKLGSRYPGSGGIMDYFNE
AFSHKTLSGALTLIYLGTLVITVALVAKSFGAYASRLFLPDRAVTIYSTALFASVAILLLGALNMGGARAVGKSEVIMVA
FKLLILTVLMLASFGSSVPVGADPIPVKGLDGLLGSVGLTFFAFAGYGMMANTAGNLKNPSRTLPRAIFMAIGLVLALYL
ILSYVVLSNVPATSLESHTETAVAQAAYPVLGMWGFMAVSVAALIATASAINATMFSMLDISRALARNGQLGAIFKQPFW
GHGTEGFFYLLLGILVMTNAFNLVAIANLAGACFLISYLAVFVAHWRLRKETQGNALLIILGFLLMLFILGAFFYQMFFS
QPYLIPLIVLFVAACFILEFLIRRKIAKNVPGVS

Specific function: Probable amino-acid or metabolite transport protein [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI114326544, Length=411, Percent_Identity=22.8710462287105, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI114326550, Length=411, Percent_Identity=22.8710462287105, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI181337167, Length=344, Percent_Identity=24.7093023255814, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI258645169, Length=355, Percent_Identity=25.3521126760563, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI1786694, Length=398, Percent_Identity=40.9547738693467, Blast_Score=268, Evalue=6e-73,
Organism=Caenorhabditis elegans, GI17540018, Length=331, Percent_Identity=26.5861027190332, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17532491, Length=336, Percent_Identity=24.702380952381, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI32566699, Length=289, Percent_Identity=27.3356401384083, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI221512776, Length=412, Percent_Identity=25, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24666159, Length=414, Percent_Identity=24.8792270531401, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI45550968, Length=325, Percent_Identity=26.7692307692308, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI19921172, Length=325, Percent_Identity=26.7692307692308, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221331183, Length=332, Percent_Identity=25.3012048192771, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI17647653, Length=332, Percent_Identity=25.3012048192771, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24664379, Length=332, Percent_Identity=25.3012048192771, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24667468, Length=336, Percent_Identity=24.4047619047619, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24651635, Length=324, Percent_Identity=25, Blast_Score=66, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24651633, Length=324, Percent_Identity=25, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 46170; Mature: 46170

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCCCCCC
>Mature Secondary Structure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HHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]