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The map label for this gene is yngJ [H]

Identifier: 186476742

GI number: 186476742

Start: 2238198

End: 2239436

Strand: Direct

Name: yngJ [H]

Synonym: Bphy_1987

Alternate gene names: 186476742

Gene position: 2238198-2239436 (Clockwise)

Preceding gene: 186476741

Following gene: 186476743

Centisome position: 64.33

GC content: 60.37

Gene sequence:

>1239_bases
ATGAATTTCGACTACACCCCGAAGGTTCAGGCATTGCGCGACAAGCTCGTCGCCTTCTTCGACGAGCACATCTATCCGAA
CGAACAGGCCTTTGCCGCCGAGGTGGCGCGCAACCGTCAGGCGGGCAATGCGTGGGTGCCGACCGAACTCATCGAAAGCC
TGAAGCAGCAGGCGCGCAATACCGGTCTGTGGAATCTGTTTCTGCCCGACTCGGAGCGCGGCGCGGGTTTGACGAATCTC
GAGTACGCGCCGCTGTGCGAAATCATGGGCCGCGTGCCGTGGGCGCCCGAGGTGTTCAACTGCAGCGCGCCCGACACCGG
GAACATGGAAACCATCGAGCGCTATGGGAGCGAGGAAAACAAACGCGAATGGCTGGAGCCGCTGCTGCAAGGCCAGATCC
GTTCGGCATTCTTGATGACCGAGCCGGAAGTCGCTTCATCCGATGCGACCAACATCCGGACGAGCATCGTGCGCGACGGC
GACTCGTATGTGATCAATGGGCACAAGTGGTGGTCGTCGGGTGCGGGCGATCCGCGCTGCAAGCTGTTGATCGTGATGGG
CAAGACGGATCCCGACGCGCCCCGTCATCAACAGCAATCGATGATTCTCGTGCCCGCCGATGCGACGGGTATTACGGTGC
ATCGTCCGCTGACGGTGTTCGGTTATGACGACGCGCCGCACGGTCACATGGAAATCACGCTCGACGACGTGCGCGTGCCT
GCCGCGAATATGCTGCTGGGCGAAGGACGCGGGTTTGAAATCGCGCAGGGGCGATTAGGCCCGGGACGTATTCACCATTG
CATGCGATTGATCGGGCTTGCTGAGCGCGCCCTTGAACTGATGTCGAAGCGTGCTCTTCAGCGGGTTGCGTTTGGCAAGC
CAATTGCTGCGCAGACGGTCACGCAGGAACGTATTGCGGAGGCACGTTGTTTGATCGAGCAGGCGCGGCTGTTGACGCTG
AAGACGGCTTATATGATGGATACCGTCGGTAACAAGGGAGCGCGCGGCGAGATTGCGATGATCAAGGTTGTGGCGCCGAA
CATGGCTTGTACCGTGATCGATTGGGCGATTCAGGCGCATGGCGCCGCTGGTATGTGCGATGACTTTCCGCTCGCTTATG
CGTATACAACCGCGCGGTGGTTGCGGTTTGCGGATGGGCCCGATGAGGTCCATCGCAATGCGATAGCCAAGATCGAGCTG
GGCAAGTATGCCCAGCCGGCTGATTCAGGTCCGTTTTGA

Upstream 100 bases:

>100_bases
TGGCGCTATGCGCAGAAAGTGCGTTGAGTGAACGCGCGCAGCGGCGGCTCTTCCACACATTTACGTTGTAGAACGGATTC
GACGTCATCCAGAGGGCAAA

Downstream 100 bases:

>100_bases
CGTCGGTGTGTTTGTCGCTCCGTCAGCAGGGTTTTGTGAACGGTGATCTAATTTTTTTGTTGTTTGCGACGCTGGGTGTC
AGTTTCTGGTCTCGCTGACG

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MNFDYTPKVQALRDKLVAFFDEHIYPNEQAFAAEVARNRQAGNAWVPTELIESLKQQARNTGLWNLFLPDSERGAGLTNL
EYAPLCEIMGRVPWAPEVFNCSAPDTGNMETIERYGSEENKREWLEPLLQGQIRSAFLMTEPEVASSDATNIRTSIVRDG
DSYVINGHKWWSSGAGDPRCKLLIVMGKTDPDAPRHQQQSMILVPADATGITVHRPLTVFGYDDAPHGHMEITLDDVRVP
AANMLLGEGRGFEIAQGRLGPGRIHHCMRLIGLAERALELMSKRALQRVAFGKPIAAQTVTQERIAEARCLIEQARLLTL
KTAYMMDTVGNKGARGEIAMIKVVAPNMACTVIDWAIQAHGAAGMCDDFPLAYAYTTARWLRFADGPDEVHRNAIAKIEL
GKYAQPADSGPF

Sequences:

>Translated_412_residues
MNFDYTPKVQALRDKLVAFFDEHIYPNEQAFAAEVARNRQAGNAWVPTELIESLKQQARNTGLWNLFLPDSERGAGLTNL
EYAPLCEIMGRVPWAPEVFNCSAPDTGNMETIERYGSEENKREWLEPLLQGQIRSAFLMTEPEVASSDATNIRTSIVRDG
DSYVINGHKWWSSGAGDPRCKLLIVMGKTDPDAPRHQQQSMILVPADATGITVHRPLTVFGYDDAPHGHMEITLDDVRVP
AANMLLGEGRGFEIAQGRLGPGRIHHCMRLIGLAERALELMSKRALQRVAFGKPIAAQTVTQERIAEARCLIEQARLLTL
KTAYMMDTVGNKGARGEIAMIKVVAPNMACTVIDWAIQAHGAAGMCDDFPLAYAYTTARWLRFADGPDEVHRNAIAKIEL
GKYAQPADSGPF
>Mature_412_residues
MNFDYTPKVQALRDKLVAFFDEHIYPNEQAFAAEVARNRQAGNAWVPTELIESLKQQARNTGLWNLFLPDSERGAGLTNL
EYAPLCEIMGRVPWAPEVFNCSAPDTGNMETIERYGSEENKREWLEPLLQGQIRSAFLMTEPEVASSDATNIRTSIVRDG
DSYVINGHKWWSSGAGDPRCKLLIVMGKTDPDAPRHQQQSMILVPADATGITVHRPLTVFGYDDAPHGHMEITLDDVRVP
AANMLLGEGRGFEIAQGRLGPGRIHHCMRLIGLAERALELMSKRALQRVAFGKPIAAQTVTQERIAEARCLIEQARLLTL
KTAYMMDTVGNKGARGEIAMIKVVAPNMACTVIDWAIQAHGAAGMCDDFPLAYAYTTARWLRFADGPDEVHRNAIAKIEL
GKYAQPADSGPF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI48976061, Length=400, Percent_Identity=59.75, Blast_Score=480, Evalue=1e-136,
Organism=Homo sapiens, GI211971008, Length=400, Percent_Identity=59.75, Blast_Score=480, Evalue=1e-136,
Organism=Homo sapiens, GI38505218, Length=400, Percent_Identity=56.5, Blast_Score=459, Evalue=1e-129,
Organism=Homo sapiens, GI4557231, Length=410, Percent_Identity=26.5853658536585, Blast_Score=133, Evalue=2e-31,
Organism=Homo sapiens, GI187960098, Length=410, Percent_Identity=26.5853658536585, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI4557233, Length=342, Percent_Identity=30.9941520467836, Blast_Score=132, Evalue=6e-31,
Organism=Homo sapiens, GI21361497, Length=381, Percent_Identity=27.5590551181102, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI4501859, Length=355, Percent_Identity=27.887323943662, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI7656849, Length=399, Percent_Identity=25.8145363408521, Blast_Score=112, Evalue=8e-25,
Organism=Homo sapiens, GI4557235, Length=400, Percent_Identity=28.25, Blast_Score=108, Evalue=8e-24,
Organism=Homo sapiens, GI226958412, Length=387, Percent_Identity=25.3229974160207, Blast_Score=108, Evalue=9e-24,
Organism=Homo sapiens, GI76496475, Length=400, Percent_Identity=28.25, Blast_Score=108, Evalue=9e-24,
Organism=Homo sapiens, GI4501857, Length=407, Percent_Identity=26.044226044226, Blast_Score=102, Evalue=9e-22,
Organism=Homo sapiens, GI226958414, Length=343, Percent_Identity=25.6559766763848, Blast_Score=100, Evalue=3e-21,
Organism=Escherichia coli, GI87081958, Length=306, Percent_Identity=30.718954248366, Blast_Score=105, Evalue=6e-24,
Organism=Escherichia coli, GI1786223, Length=380, Percent_Identity=25, Blast_Score=79, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17562446, Length=361, Percent_Identity=57.0637119113573, Blast_Score=421, Evalue=1e-118,
Organism=Caenorhabditis elegans, GI17534899, Length=417, Percent_Identity=28.0575539568345, Blast_Score=148, Evalue=6e-36,
Organism=Caenorhabditis elegans, GI17569725, Length=417, Percent_Identity=28.2973621103118, Blast_Score=145, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI17533517, Length=358, Percent_Identity=27.0949720670391, Blast_Score=113, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17570075, Length=289, Percent_Identity=27.681660899654, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17508101, Length=346, Percent_Identity=27.1676300578035, Blast_Score=109, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17506239, Length=350, Percent_Identity=27.1428571428571, Blast_Score=108, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI17538396, Length=387, Percent_Identity=24.2894056847545, Blast_Score=104, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI71985184, Length=343, Percent_Identity=27.1137026239067, Blast_Score=104, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI17551932, Length=393, Percent_Identity=24.6819338422392, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17505929, Length=406, Percent_Identity=24.384236453202, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI71990804, Length=264, Percent_Identity=27.2727272727273, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71985192, Length=254, Percent_Identity=26.3779527559055, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI32563615, Length=179, Percent_Identity=29.608938547486, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI71982178, Length=283, Percent_Identity=24.0282685512367, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24646207, Length=344, Percent_Identity=29.3604651162791, Blast_Score=128, Evalue=8e-30,
Organism=Drosophila melanogaster, GI24660351, Length=282, Percent_Identity=30.8510638297872, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI21356377, Length=388, Percent_Identity=28.3505154639175, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI281363737, Length=348, Percent_Identity=29.0229885057471, Blast_Score=123, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24666513, Length=297, Percent_Identity=30.976430976431, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI21355753, Length=325, Percent_Identity=25.5384615384615, Blast_Score=83, Evalue=4e-16,
Organism=Drosophila melanogaster, GI19920834, Length=324, Percent_Identity=26.2345679012346, Blast_Score=75, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 45603; Mature: 45603

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFDYTPKVQALRDKLVAFFDEHIYPNEQAFAAEVARNRQAGNAWVPTELIESLKQQARN
CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC
TGLWNLFLPDSERGAGLTNLEYAPLCEIMGRVPWAPEVFNCSAPDTGNMETIERYGSEEN
CCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEECCCCCCCCHHHHHHHCCCCH
KREWLEPLLQGQIRSAFLMTEPEVASSDATNIRTSIVRDGDSYVINGHKWWSSGAGDPRC
HHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHEEECCCCEEECCEEEECCCCCCCCE
KLLIVMGKTDPDAPRHQQQSMILVPADATGITVHRPLTVFGYDDAPHGHMEITLDDVRVP
EEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEECCEEEEECCCCCCCEEEEEEECCCCC
AANMLLGEGRGFEIAQGRLGPGRIHHCMRLIGLAERALELMSKRALQRVAFGKPIAAQTV
HHHEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
TQERIAEARCLIEQARLLTLKTAYMMDTVGNKGARGEIAMIKVVAPNMACTVIDWAIQAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEHHHHHHHCC
GAAGMCDDFPLAYAYTTARWLRFADGPDEVHRNAIAKIELGKYAQPADSGPF
CCCCCCCCCCHHHHHHHHHHHEECCCHHHHHHHHEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MNFDYTPKVQALRDKLVAFFDEHIYPNEQAFAAEVARNRQAGNAWVPTELIESLKQQARN
CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC
TGLWNLFLPDSERGAGLTNLEYAPLCEIMGRVPWAPEVFNCSAPDTGNMETIERYGSEEN
CCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEECCCCCCCCHHHHHHHCCCCH
KREWLEPLLQGQIRSAFLMTEPEVASSDATNIRTSIVRDGDSYVINGHKWWSSGAGDPRC
HHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHEEECCCCEEECCEEEECCCCCCCCE
KLLIVMGKTDPDAPRHQQQSMILVPADATGITVHRPLTVFGYDDAPHGHMEITLDDVRVP
EEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEECCEEEEECCCCCCCEEEEEEECCCCC
AANMLLGEGRGFEIAQGRLGPGRIHHCMRLIGLAERALELMSKRALQRVAFGKPIAAQTV
HHHEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
TQERIAEARCLIEQARLLTLKTAYMMDTVGNKGARGEIAMIKVVAPNMACTVIDWAIQAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEHHHHHHHCC
GAAGMCDDFPLAYAYTTARWLRFADGPDEVHRNAIAKIELGKYAQPADSGPF
CCCCCCCCCCHHHHHHHHHHHEECCCHHHHHHHHEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]