Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is 186476741
Identifier: 186476741
GI number: 186476741
Start: 2237018
End: 2238124
Strand: Direct
Name: 186476741
Synonym: Bphy_1986
Alternate gene names: NA
Gene position: 2237018-2238124 (Clockwise)
Preceding gene: 186476740
Following gene: 186476742
Centisome position: 64.3
GC content: 64.32
Gene sequence:
>1107_bases ATGCCGCACGCCGCGACACCAGCCGGATCGACGACTCAAACCGATTACACCGCCTTCGAAGGCACACGTCCCGTCAGCGA ACGGCAACGCATCGACATCGAAGCGCTTTCCGCGTGGCTCGCGCAGCACGTTGACGGCTACGCGGGACCGCTGACGCTCG AACAGTTCGCGGGTGGCCAGTCGAATCCCACCTTCAAGCTGATCACGCCGACGCGCGCCTATGTGATGCGCGCGAAACCC GGTCCGTCGGCGAAACTGCTGCCGTCCGCGCACGCGATCGAACGCGAGTATCGCGTGATGCTCGCGCTGCGTGACACCGA TGTGCCCGTCGCGACGATGCTCGCGCTGTGCGAAGACGAAAGCGTGATCGGCCGCGCGTTCTATGTCATGGCGTTCGTTC AGGGCCGCGTGCTATGGGATCCCTCGCTGCCCGGCATGACGCCCCCGCAGCGCGCTGCGATCTACGACGAGATGAATCGC GTGATCGCCGCATTGCATACCGTCGATGTCGCCAAGGCCGGGCTTGCGGACTATGGCAGGCCCGGCAACTATCTCGCGCG ACAAATCGGCAGATGGAGCAAGCAGTATCAGGCATCGGAAACGGAGCCGATCGACGCGATGCATCGTCTGATCGACTGGC TGCCCCAACATGTGCCCGCCGACACGGGCGAGCGCGCAACCGTCGTGCACGGCGATTACCGGCTCGACAATCTGATCTTC CATCCTCACGAATCACGCGTGCTCGCCGTGCTCGACTGGGAGCTGTCGACGCTCGGCGATCCCCTCGCCGACTTCGCGTA TCACTGCATGGCATGGCACGTCGATCCCGCGCAGTTTCGCGGCATTGCGGGTCTCGACTGGCGCGCGCTCGGCATTCCCG ACGAGGCACAGTACGTGCAACGCTACTGCGAGCGCACCGGCCTGACAATCCGCGGCGACTGGAACGTCTACCTCGCGTAC AACATGTTCCGCATTGCGGCGATTCTGCAAGGAATCATGAAACGCGTCGTCGATGGCACGGCTGCAAGCGAACAGGCGCT CGATGCGGGACGGCGGGCGCGCCCGATGGCGGAACTTGCGTGGCGCTATGCGCAGAAAGTGCGTTGA
Upstream 100 bases:
>100_bases TCGCGAGGTGCGCAATACGTCGATGGAATTGCTGTACGCGCAATTCCTGCAAAGCAGAGGCAGCTAGCAGTCGATCATTC GATCATCCAACGGAGGAGAC
Downstream 100 bases:
>100_bases GTGAACGCGCGCAGCGGCGGCTCTTCCACACATTTACGTTGTAGAACGGATTCGACGTCATCCAGAGGGCAAAATGAATT TCGACTACACCCCGAAGGTT
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Family Protein; Acyl-CoA Dehydrogenase; Phosphotransferase Family; Acyl-Co A Dehydrogenase; Acyl-CoA Dehydrogenase FadE; Tyrosine Protein Kinase/Aminoglycoside Phosphotransferase; Acyl-Coa Dehydrogenase Fade; Acyl-CoA Dehydrogenase Family Member; Acyl-CoA Dehydrogenase Domain-Containing Protein
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MPHAATPAGSTTQTDYTAFEGTRPVSERQRIDIEALSAWLAQHVDGYAGPLTLEQFAGGQSNPTFKLITPTRAYVMRAKP GPSAKLLPSAHAIEREYRVMLALRDTDVPVATMLALCEDESVIGRAFYVMAFVQGRVLWDPSLPGMTPPQRAAIYDEMNR VIAALHTVDVAKAGLADYGRPGNYLARQIGRWSKQYQASETEPIDAMHRLIDWLPQHVPADTGERATVVHGDYRLDNLIF HPHESRVLAVLDWELSTLGDPLADFAYHCMAWHVDPAQFRGIAGLDWRALGIPDEAQYVQRYCERTGLTIRGDWNVYLAY NMFRIAAILQGIMKRVVDGTAASEQALDAGRRARPMAELAWRYAQKVR
Sequences:
>Translated_368_residues MPHAATPAGSTTQTDYTAFEGTRPVSERQRIDIEALSAWLAQHVDGYAGPLTLEQFAGGQSNPTFKLITPTRAYVMRAKP GPSAKLLPSAHAIEREYRVMLALRDTDVPVATMLALCEDESVIGRAFYVMAFVQGRVLWDPSLPGMTPPQRAAIYDEMNR VIAALHTVDVAKAGLADYGRPGNYLARQIGRWSKQYQASETEPIDAMHRLIDWLPQHVPADTGERATVVHGDYRLDNLIF HPHESRVLAVLDWELSTLGDPLADFAYHCMAWHVDPAQFRGIAGLDWRALGIPDEAQYVQRYCERTGLTIRGDWNVYLAY NMFRIAAILQGIMKRVVDGTAASEQALDAGRRARPMAELAWRYAQKVR >Mature_367_residues PHAATPAGSTTQTDYTAFEGTRPVSERQRIDIEALSAWLAQHVDGYAGPLTLEQFAGGQSNPTFKLITPTRAYVMRAKPG PSAKLLPSAHAIEREYRVMLALRDTDVPVATMLALCEDESVIGRAFYVMAFVQGRVLWDPSLPGMTPPQRAAIYDEMNRV IAALHTVDVAKAGLADYGRPGNYLARQIGRWSKQYQASETEPIDAMHRLIDWLPQHVPADTGERATVVHGDYRLDNLIFH PHESRVLAVLDWELSTLGDPLADFAYHCMAWHVDPAQFRGIAGLDWRALGIPDEAQYVQRYCERTGLTIRGDWNVYLAYN MFRIAAILQGIMKRVVDGTAASEQALDAGRRARPMAELAWRYAQKVR
Specific function: Unknown
COG id: COG3173
COG function: function code R; Predicted aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI211971008, Length=350, Percent_Identity=51.1428571428571, Blast_Score=345, Evalue=4e-95, Organism=Homo sapiens, GI48976061, Length=350, Percent_Identity=51.1428571428571, Blast_Score=345, Evalue=4e-95, Organism=Homo sapiens, GI38505218, Length=345, Percent_Identity=39.1304347826087, Blast_Score=256, Evalue=2e-68, Organism=Caenorhabditis elegans, GI17562446, Length=368, Percent_Identity=35.5978260869565, Blast_Score=231, Evalue=4e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41103; Mature: 40972
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: PS00109 PROTEIN_KINASE_TYR ; PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHAATPAGSTTQTDYTAFEGTRPVSERQRIDIEALSAWLAQHVDGYAGPLTLEQFAGGQ CCCCCCCCCCCCCCCCEECCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCEEHHHHCCCC SNPTFKLITPTRAYVMRAKPGPSAKLLPSAHAIEREYRVMLALRDTDVPVATMLALCEDE CCCCEEEECCCEEEEEECCCCCCCCCCCCHHHHHHCEEEEEEEECCCCCHHHHHHHHCCC SVIGRAFYVMAFVQGRVLWDPSLPGMTPPQRAAIYDEMNRVIAALHTVDVAKAGLADYGR HHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PGNYLARQIGRWSKQYQASETEPIDAMHRLIDWLPQHVPADTGERATVVHGDYRLDNLIF CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEECCEEE HPHESRVLAVLDWELSTLGDPLADFAYHCMAWHVDPAQFRGIAGLDWRALGIPDEAQYVQ CCCCCCEEEEEECCHHHCCCHHHHHHHHHHHCCCCHHHHCCCCCCCEEEECCCCHHHHHH RYCERTGLTIRGDWNVYLAYNMFRIAAILQGIMKRVVDGTAASEQALDAGRRARPMAELA HHHHHCCCEEECCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHCCHHHHHH WRYAQKVR HHHHHHCC >Mature Secondary Structure PHAATPAGSTTQTDYTAFEGTRPVSERQRIDIEALSAWLAQHVDGYAGPLTLEQFAGGQ CCCCCCCCCCCCCCCEECCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCEEHHHHCCCC SNPTFKLITPTRAYVMRAKPGPSAKLLPSAHAIEREYRVMLALRDTDVPVATMLALCEDE CCCCEEEECCCEEEEEECCCCCCCCCCCCHHHHHHCEEEEEEEECCCCCHHHHHHHHCCC SVIGRAFYVMAFVQGRVLWDPSLPGMTPPQRAAIYDEMNRVIAALHTVDVAKAGLADYGR HHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PGNYLARQIGRWSKQYQASETEPIDAMHRLIDWLPQHVPADTGERATVVHGDYRLDNLIF CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEECCEEE HPHESRVLAVLDWELSTLGDPLADFAYHCMAWHVDPAQFRGIAGLDWRALGIPDEAQYVQ CCCCCCEEEEEECCHHHCCCHHHHHHHHHHHCCCCHHHHCCCCCCCEEEECCCCHHHHHH RYCERTGLTIRGDWNVYLAYNMFRIAAILQGIMKRVVDGTAASEQALDAGRRARPMAELA HHHHHCCCEEECCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHCCHHHHHH WRYAQKVR HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA