Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183222657
Identifier: 183222657
GI number: 183222657
Start: 3426003
End: 3427259
Strand: Direct
Name: 183222657
Synonym: LEPBI_I3312
Alternate gene names: NA
Gene position: 3426003-3427259 (Clockwise)
Preceding gene: 183222656
Following gene: 183222658
Centisome position: 95.18
GC content: 41.13
Gene sequence:
>1257_bases ATGAAAAATAAAACATTTACATTATTTGTTTTCGCAAGTTTATCCTTATTCTTAATTGAATGCCAAAAATCAGTTCAAAC TGATAAAGATACCCAAGCCACCTTGATTGCAGGAATCTTTGGATCCTGTTTTAGTTTGGATTCTTGTTTTGACCAGTATA CCAAATCGACGGATGAAGGTGCCAGTTTCCAGGTGTTTGACCAAGATGGTTCACGGATTTATGCAAGGCAGTCTGTACTT GATTTTAATACCTACAAACCAATTGCATCAGGTTCCAAATGGGTGACTGCCATCACAGCAATGAGGGTCATTGATTGTAA CACAAATAGTGCTATATATGCACAATGCGGAACAGTGACTACAGGGACTTGTAATAACGGTGCCGTTGGCGGTGCCATTT CGTTGTCTCGCACGACGGCCCAAGTACTTGGATGGACAGGCACGTATGCTAATGTCACCTTACGTCAGTTATTGTCATTT ACTTCCGGACTAAATGCAGGTGGAAGTAGTGGAGCGGGGCAAGCAAGTTGTATTTCAACACTTCCAGTGGGGGCAAGTTC AACAGAAAAAGATAGTTGTGTGAATAATATCAGAGACCAATCTACTGGCACTCCTGGAGCATTGTACCAATACAATTCCA ATCATATGGCAGTCGCACAACGAATGTTAGAAGTGTCATGTAACAAAACATGGGATACTTTATTTTCTCAACTCATCGTC ACTCCTCTAGGTTGGGATGCTAGCCAAGCAATCTGGCGAGGAAATTCGAGAGGGGGAACCGATACCGATGGAAGTTTATC CGGTGCTTATGGACTCTCCATATCTCCAGAACATTACGCAAGGATGTTAAATGCACTTCTTACGAATGGTACTGCTAAAA ATTCAGTAGGTGCAAACATAACCAATTTTCTTTCCACAACATCGGTGACAGAAATTTTGGCAGACCAGTACAATGGAGCA AAAATTGGTTATTCACAATTTTCAGCTTTTGGTTACCGTTGGCAATATGGACTTGGAAACTGGAGGTTTTGCACTGTGAC TGATGTCCCTGCGGAATGTGATCGAGATTTGATCTCCCATAGCATTGGGATCAATGGATTTTATCCATGGCTCGATAAAA ATCGGAATTATATGGCAATCCTTGCTGTGAATAATATCGGAAGAAAAAATGGATTGAGTTTGTTACCAGCTTCTTCAACC TCATTATTCTTTGCAGAAACTGTAAGACCGCTCATACATTCGCAAATAGGTAGGTAA
Upstream 100 bases:
>100_bases CACGTGATGCCCTACTATTACTTGAGTTTGCATCCTGCGATTTAGAAAAAACAGGAAAAATCATTACCATCGAACCAATT TCATTTTGAAAGGAAATTAT
Downstream 100 bases:
>100_bases CCATGATCCAAAAACAGACACTCTTTCCATTCCTCTTGGGATGTTTTTTATTCGTAAACGTCCTTCCACTCATTGCCCAA TCGCCAGAGTGGTCGGAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MKNKTFTLFVFASLSLFLIECQKSVQTDKDTQATLIAGIFGSCFSLDSCFDQYTKSTDEGASFQVFDQDGSRIYARQSVL DFNTYKPIASGSKWVTAITAMRVIDCNTNSAIYAQCGTVTTGTCNNGAVGGAISLSRTTAQVLGWTGTYANVTLRQLLSF TSGLNAGGSSGAGQASCISTLPVGASSTEKDSCVNNIRDQSTGTPGALYQYNSNHMAVAQRMLEVSCNKTWDTLFSQLIV TPLGWDASQAIWRGNSRGGTDTDGSLSGAYGLSISPEHYARMLNALLTNGTAKNSVGANITNFLSTTSVTEILADQYNGA KIGYSQFSAFGYRWQYGLGNWRFCTVTDVPAECDRDLISHSIGINGFYPWLDKNRNYMAILAVNNIGRKNGLSLLPASST SLFFAETVRPLIHSQIGR
Sequences:
>Translated_418_residues MKNKTFTLFVFASLSLFLIECQKSVQTDKDTQATLIAGIFGSCFSLDSCFDQYTKSTDEGASFQVFDQDGSRIYARQSVL DFNTYKPIASGSKWVTAITAMRVIDCNTNSAIYAQCGTVTTGTCNNGAVGGAISLSRTTAQVLGWTGTYANVTLRQLLSF TSGLNAGGSSGAGQASCISTLPVGASSTEKDSCVNNIRDQSTGTPGALYQYNSNHMAVAQRMLEVSCNKTWDTLFSQLIV TPLGWDASQAIWRGNSRGGTDTDGSLSGAYGLSISPEHYARMLNALLTNGTAKNSVGANITNFLSTTSVTEILADQYNGA KIGYSQFSAFGYRWQYGLGNWRFCTVTDVPAECDRDLISHSIGINGFYPWLDKNRNYMAILAVNNIGRKNGLSLLPASST SLFFAETVRPLIHSQIGR >Mature_418_residues MKNKTFTLFVFASLSLFLIECQKSVQTDKDTQATLIAGIFGSCFSLDSCFDQYTKSTDEGASFQVFDQDGSRIYARQSVL DFNTYKPIASGSKWVTAITAMRVIDCNTNSAIYAQCGTVTTGTCNNGAVGGAISLSRTTAQVLGWTGTYANVTLRQLLSF TSGLNAGGSSGAGQASCISTLPVGASSTEKDSCVNNIRDQSTGTPGALYQYNSNHMAVAQRMLEVSCNKTWDTLFSQLIV TPLGWDASQAIWRGNSRGGTDTDGSLSGAYGLSISPEHYARMLNALLTNGTAKNSVGANITNFLSTTSVTEILADQYNGA KIGYSQFSAFGYRWQYGLGNWRFCTVTDVPAECDRDLISHSIGINGFYPWLDKNRNYMAILAVNNIGRKNGLSLLPASST SLFFAETVRPLIHSQIGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44988; Mature: 44988
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKTFTLFVFASLSLFLIECQKSVQTDKDTQATLIAGIFGSCFSLDSCFDQYTKSTDEG CCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ASFQVFDQDGSRIYARQSVLDFNTYKPIASGSKWVTAITAMRVIDCNTNSAIYAQCGTVT CEEEEECCCCCEEEEHHHHHCCCCCCCCCCCCHHHHHEEEEEEEECCCCCEEEEECCCEE TGTCNNGAVGGAISLSRTTAQVLGWTGTYANVTLRQLLSFTSGLNAGGSSGAGQASCIST ECCCCCCCCCCEEEECHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEE LPVGASSTEKDSCVNNIRDQSTGTPGALYQYNSNHMAVAQRMLEVSCNKTWDTLFSQLIV CCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHH TPLGWDASQAIWRGNSRGGTDTDGSLSGAYGLSISPEHYARMLNALLTNGTAKNSVGANI CCCCCCHHHHHHCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCH TNFLSTTSVTEILADQYNGAKIGYSQFSAFGYRWQYGLGNWRFCTVTDVPAECDRDLISH HHHHHHHHHHHHHHHCCCCCEECHHHHHHCCEEEEECCCCEEEEEEECCCHHHHHHHHHH SIGINGFYPWLDKNRNYMAILAVNNIGRKNGLSLLPASSTSLFFAETVRPLIHSQIGR HCCCCCEECHHCCCCCEEEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MKNKTFTLFVFASLSLFLIECQKSVQTDKDTQATLIAGIFGSCFSLDSCFDQYTKSTDEG CCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ASFQVFDQDGSRIYARQSVLDFNTYKPIASGSKWVTAITAMRVIDCNTNSAIYAQCGTVT CEEEEECCCCCEEEEHHHHHCCCCCCCCCCCCHHHHHEEEEEEEECCCCCEEEEECCCEE TGTCNNGAVGGAISLSRTTAQVLGWTGTYANVTLRQLLSFTSGLNAGGSSGAGQASCIST ECCCCCCCCCCEEEECHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEE LPVGASSTEKDSCVNNIRDQSTGTPGALYQYNSNHMAVAQRMLEVSCNKTWDTLFSQLIV CCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHH TPLGWDASQAIWRGNSRGGTDTDGSLSGAYGLSISPEHYARMLNALLTNGTAKNSVGANI CCCCCCHHHHHHCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCH TNFLSTTSVTEILADQYNGAKIGYSQFSAFGYRWQYGLGNWRFCTVTDVPAECDRDLISH HHHHHHHHHHHHHHHCCCCCEECHHHHHHCCEEEEECCCCEEEEEEECCCHHHHHHHHHH SIGINGFYPWLDKNRNYMAILAVNNIGRKNGLSLLPASSTSLFFAETVRPLIHSQIGR HCCCCCEECHHCCCCCEEEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA