Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

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The map label for this gene is 183222658

Identifier: 183222658

GI number: 183222658

Start: 3427262

End: 3427945

Strand: Direct

Name: 183222658

Synonym: LEPBI_I3313

Alternate gene names: NA

Gene position: 3427262-3427945 (Clockwise)

Preceding gene: 183222657

Following gene: 183222663

Centisome position: 95.21

GC content: 39.62

Gene sequence:

>684_bases
ATGATCCAAAAACAGACACTCTTTCCATTCCTCTTGGGATGTTTTTTATTCGTAAACGTCCTTCCACTCATTGCCCAATC
GCCAGAGTGGTCGGAATCAAAACGGAAAAAAGGAATCCAAATTCTCACAAGGCCAGTACCAGGTTCCAACATTGAAGAGT
TTTTGGGCAAAACGGAAGTGGAAGCTTCTATCTCACAAATCATTGCTTTGCTAGTAGACCCACAATCTTGTAAAAATTTG
TACCACCAATGCAAAGAACTTACTGTAATTTCTGGATCAGAGAAAAAATCATCTGTGTATTTACGAAATGGTGCACCTTG
GCCGGTGAACGACCGTGATGTGATCATGGATAGAAGTTTTGAACAGAATGACAAAACTCTGACAACAACCATGAAGATGA
AACGATTGGATTCCAATGCAAAAGGATCGCCATCTGGTGTCACTCGTATGCCTGGATTTGAAGGCTATTGGAAACTCATT
CCACTTGCGAATGGTAAAATCAAGATTGAATACCAAGCGCATTTTGAACCAGGTGGTTCTGTTCCACAATCTGTGATCAA
TTTGGTTTTAACTGACACTCCTTATGAAACTTTGTTAAACTTAAAATCTTTAGTAGAACAAGGAAAACACAAAGAAGCGA
AGTATGATTGGATCAAGGAGCCGAATCACACTCCTTCCAATTAA

Upstream 100 bases:

>100_bases
GAAGAAAAAATGGATTGAGTTTGTTACCAGCTTCTTCAACCTCATTATTCTTTGCAGAAACTGTAAGACCGCTCATACAT
TCGCAAATAGGTAGGTAACC

Downstream 100 bases:

>100_bases
TCGAATTCATTGACTCTTATCAATGTTTGGTTGTCCATTCCATTGATAGGAGTTACTGCCTAAAATTCTCAGATTTTATA
CTTAGTATATTTGTGAGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MIQKQTLFPFLLGCFLFVNVLPLIAQSPEWSESKRKKGIQILTRPVPGSNIEEFLGKTEVEASISQIIALLVDPQSCKNL
YHQCKELTVISGSEKKSSVYLRNGAPWPVNDRDVIMDRSFEQNDKTLTTTMKMKRLDSNAKGSPSGVTRMPGFEGYWKLI
PLANGKIKIEYQAHFEPGGSVPQSVINLVLTDTPYETLLNLKSLVEQGKHKEAKYDWIKEPNHTPSN

Sequences:

>Translated_227_residues
MIQKQTLFPFLLGCFLFVNVLPLIAQSPEWSESKRKKGIQILTRPVPGSNIEEFLGKTEVEASISQIIALLVDPQSCKNL
YHQCKELTVISGSEKKSSVYLRNGAPWPVNDRDVIMDRSFEQNDKTLTTTMKMKRLDSNAKGSPSGVTRMPGFEGYWKLI
PLANGKIKIEYQAHFEPGGSVPQSVINLVLTDTPYETLLNLKSLVEQGKHKEAKYDWIKEPNHTPSN
>Mature_227_residues
MIQKQTLFPFLLGCFLFVNVLPLIAQSPEWSESKRKKGIQILTRPVPGSNIEEFLGKTEVEASISQIIALLVDPQSCKNL
YHQCKELTVISGSEKKSSVYLRNGAPWPVNDRDVIMDRSFEQNDKTLTTTMKMKRLDSNAKGSPSGVTRMPGFEGYWKLI
PLANGKIKIEYQAHFEPGGSVPQSVINLVLTDTPYETLLNLKSLVEQGKHKEAKYDWIKEPNHTPSN

Specific function: May play a role in the interaction of the bacterium with animal cells [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 START domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002913 [H]

Pfam domain/function: PF01852 START [H]

EC number: NA

Molecular weight: Translated: 25562; Mature: 25562

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQKQTLFPFLLGCFLFVNVLPLIAQSPEWSESKRKKGIQILTRPVPGSNIEEFLGKTEV
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEECCCCCCCHHHHHCCHHH
EASISQIIALLVDPQSCKNLYHQCKELTVISGSEKKSSVYLRNGAPWPVNDRDVIMDRSF
HHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCCEEEEECCCCCCCCCCCEEECCCC
EQNDKTLTTTMKMKRLDSNAKGSPSGVTRMPGFEGYWKLIPLANGKIKIEYQAHFEPGGS
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCC
VPQSVINLVLTDTPYETLLNLKSLVEQGKHKEAKYDWIKEPNHTPSN
CHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCC
>Mature Secondary Structure
MIQKQTLFPFLLGCFLFVNVLPLIAQSPEWSESKRKKGIQILTRPVPGSNIEEFLGKTEV
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEECCCCCCCHHHHHCCHHH
EASISQIIALLVDPQSCKNLYHQCKELTVISGSEKKSSVYLRNGAPWPVNDRDVIMDRSF
HHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCCEEEEECCCCCCCCCCCEEECCCC
EQNDKTLTTTMKMKRLDSNAKGSPSGVTRMPGFEGYWKLIPLANGKIKIEYQAHFEPGGS
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCC
VPQSVINLVLTDTPYETLLNLKSLVEQGKHKEAKYDWIKEPNHTPSN
CHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 11276083 [H]