Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183222656
Identifier: 183222656
GI number: 183222656
Start: 3425518
End: 3425991
Strand: Direct
Name: 183222656
Synonym: LEPBI_I3311
Alternate gene names: NA
Gene position: 3425518-3425991 (Clockwise)
Preceding gene: 183222654
Following gene: 183222657
Centisome position: 95.16
GC content: 39.66
Gene sequence:
>474_bases ATGAAACAAATCATTCTTTCCATTCTTTTCTTTGTCCTTCTGACAAATTGTATGCTAACCGAAGGATTGGGAATCCCCAC TTATGGAGCTGTCAAAGGCAGTGAAGCAAAAGAAAGGATATCCGATGCCATATTAGTTGCAGAAGGAACAGCATCTTCTT TTTGGTTGGCCCAGTCTGGTATGAAAGGAGGACAAGGCCCAATCTCTCCCCTCCTCCTTGTGAATGGATTTTTAGCGAAA ATACTCTACACTTTTGTTTCCACTATCGAAGACAACGATTCCTTTCTGGAATCATCTGTTCTACAGTGTGAATCCGACAT TCAAACAAAAGGTGCTTTAGTTTTAGGAAGTATTTATGATGGTCTAACAACTGTTGGGGGAGTAACACGTGATGCCCTAC TATTACTTGAGTTTGCATCCTGCGATTTAGAAAAAACAGGAAAAATCATTACCATCGAACCAATTTCATTTTGA
Upstream 100 bases:
>100_bases TGATTCGTATCTTCCATGAGCTCAGGCTCTGGAATTCGAACCAGAGATTGCAGGTTAGTTTGTTCCCATCGATTCATATT GTTACGAGGTTTACTTTTCT
Downstream 100 bases:
>100_bases AAGGAAATTATATGAAAAATAAAACATTTACATTATTTGTTTTCGCAAGTTTATCCTTATTCTTAATTGAATGCCAAAAA TCAGTTCAAACTGATAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MKQIILSILFFVLLTNCMLTEGLGIPTYGAVKGSEAKERISDAILVAEGTASSFWLAQSGMKGGQGPISPLLLVNGFLAK ILYTFVSTIEDNDSFLESSVLQCESDIQTKGALVLGSIYDGLTTVGGVTRDALLLLEFASCDLEKTGKIITIEPISF
Sequences:
>Translated_157_residues MKQIILSILFFVLLTNCMLTEGLGIPTYGAVKGSEAKERISDAILVAEGTASSFWLAQSGMKGGQGPISPLLLVNGFLAK ILYTFVSTIEDNDSFLESSVLQCESDIQTKGALVLGSIYDGLTTVGGVTRDALLLLEFASCDLEKTGKIITIEPISF >Mature_157_residues MKQIILSILFFVLLTNCMLTEGLGIPTYGAVKGSEAKERISDAILVAEGTASSFWLAQSGMKGGQGPISPLLLVNGFLAK ILYTFVSTIEDNDSFLESSVLQCESDIQTKGALVLGSIYDGLTTVGGVTRDALLLLEFASCDLEKTGKIITIEPISF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16716; Mature: 16716
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: PS00521 P5CR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQIILSILFFVLLTNCMLTEGLGIPTYGAVKGSEAKERISDAILVAEGTASSFWLAQSG CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHEEEEECCCCCHHHHHHCC MKGGQGPISPLLLVNGFLAKILYTFVSTIEDNDSFLESSVLQCESDIQTKGALVLGSIYD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEHHHHH GLTTVGGVTRDALLLLEFASCDLEKTGKIITIEPISF HHHHHCCHHHHHHHHHHHHHCCHHHCCCEEEEECCCC >Mature Secondary Structure MKQIILSILFFVLLTNCMLTEGLGIPTYGAVKGSEAKERISDAILVAEGTASSFWLAQSG CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHEEEEECCCCCHHHHHHCC MKGGQGPISPLLLVNGFLAKILYTFVSTIEDNDSFLESSVLQCESDIQTKGALVLGSIYD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEHHHHH GLTTVGGVTRDALLLLEFASCDLEKTGKIITIEPISF HHHHHCCHHHHHHHHHHHHHCCHHHCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA