| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222116
Identifier: 183222116
GI number: 183222116
Start: 2852898
End: 2853452
Strand: Reverse
Name: 183222116
Synonym: LEPBI_I2758
Alternate gene names: NA
Gene position: 2853452-2852898 (Counterclockwise)
Preceding gene: 183222120
Following gene: 183222110
Centisome position: 79.27
GC content: 34.95
Gene sequence:
>555_bases ATGAATCACAAATCTCTCGAAACCAAATTCCAAGAAATGCGAGCTAAAAAGAACAATTCTATAGAGGATTCATTCGCACT CTTTGATGCTTTAGAAGTCGTTAGTATAGAAGAAATGATGGGGCGTTGGCATGGTTCAGGTTTTCATACCGGTCATACTA TGGATGGTGCCTTGGAAACATTTAATTGGTATGGGAAAGAATTTGTTGATTCAGAAAATGTTCATCCGTTAGTTTTTAAA TCGTTTGGGAAAACTCTCTTTAAAGTGAATCCTTCTTTAATGCCAGTTAGACTTGCTACTCTGATTCCTTCTACAAATCT TTGGCCACTCCGATTTCCATTTCTTTTGTTCCGATTTTTATTCCAAACATCAAAATCGAAAGCGCGTGTCAGACAAATTG AATTCAGAGGAAAAGTCACCTCTGCAATGATTTATGATCATCTACCCATTCATGACGTATTTAAAAAAGTAAATCAAAAT ACACTTTTTGGATGTATGGATTTCAAAGGAATGAAACAACCTTTCTTTTTTGTTTTAGAGCGTGATGTAAAGTAA
Upstream 100 bases:
>100_bases CGATGCACTTCCAGAGGAAAGTTACGAAAATTATTTCCTTGATTCGATAAACATTTCCTAAAAAGGAAACAGATGAAAAA GATGGATTAGGAAAGAAATC
Downstream 100 bases:
>100_bases ACGTTGCATCATTTTGGAATGATCTTATTTTTTTTCAAAGCCAATTGATTTTTTGTAATTTGTTCCCAAACGGAGAAAAA ATATTCTCCGATCAAACGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MNHKSLETKFQEMRAKKNNSIEDSFALFDALEVVSIEEMMGRWHGSGFHTGHTMDGALETFNWYGKEFVDSENVHPLVFK SFGKTLFKVNPSLMPVRLATLIPSTNLWPLRFPFLLFRFLFQTSKSKARVRQIEFRGKVTSAMIYDHLPIHDVFKKVNQN TLFGCMDFKGMKQPFFFVLERDVK
Sequences:
>Translated_184_residues MNHKSLETKFQEMRAKKNNSIEDSFALFDALEVVSIEEMMGRWHGSGFHTGHTMDGALETFNWYGKEFVDSENVHPLVFK SFGKTLFKVNPSLMPVRLATLIPSTNLWPLRFPFLLFRFLFQTSKSKARVRQIEFRGKVTSAMIYDHLPIHDVFKKVNQN TLFGCMDFKGMKQPFFFVLERDVK >Mature_184_residues MNHKSLETKFQEMRAKKNNSIEDSFALFDALEVVSIEEMMGRWHGSGFHTGHTMDGALETFNWYGKEFVDSENVHPLVFK SFGKTLFKVNPSLMPVRLATLIPSTNLWPLRFPFLLFRFLFQTSKSKARVRQIEFRGKVTSAMIYDHLPIHDVFKKVNQN TLFGCMDFKGMKQPFFFVLERDVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21495; Mature: 21495
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHKSLETKFQEMRAKKNNSIEDSFALFDALEVVSIEEMMGRWHGSGFHTGHTMDGALET CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH FNWYGKEFVDSENVHPLVFKSFGKTLFKVNPSLMPVRLATLIPSTNLWPLRFPFLLFRFL HHHHHHHHCCCCCCCHHHHHHHCHHEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHH FQTSKSKARVRQIEFRGKVTSAMIYDHLPIHDVFKKVNQNTLFGCMDFKGMKQPFFFVLE HHCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCCCCCCEEEEEE RDVK CCCC >Mature Secondary Structure MNHKSLETKFQEMRAKKNNSIEDSFALFDALEVVSIEEMMGRWHGSGFHTGHTMDGALET CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH FNWYGKEFVDSENVHPLVFKSFGKTLFKVNPSLMPVRLATLIPSTNLWPLRFPFLLFRFL HHHHHHHHCCCCCCCHHHHHHHCHHEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHH FQTSKSKARVRQIEFRGKVTSAMIYDHLPIHDVFKKVNQNTLFGCMDFKGMKQPFFFVLE HHCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCCCCCCEEEEEE RDVK CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA