| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222120
Identifier: 183222120
GI number: 183222120
Start: 2857365
End: 2858477
Strand: Reverse
Name: 183222120
Synonym: LEPBI_I2762
Alternate gene names: NA
Gene position: 2858477-2857365 (Counterclockwise)
Preceding gene: 183222122
Following gene: 183222116
Centisome position: 79.41
GC content: 35.76
Gene sequence:
>1113_bases TTGAAAGCAAAACGTTGGTACCAGCTTCACCTCATATTAGGAATCTTCGGATCTAGTTTTTTATTGGTAATCGGGATCAC AGGTTCCTTGCTTGTTTATGGAAAAGAAATCCAATCCATTTTATCTCCGATAGAAATAACATCGAACGCACACCGACTTA GTTTTGATGAACTTTACAGAGAGTTTAAGCGTCAGGTGCCACAGGGTAGCATTGCAGGTTGGTTGGTTTCGGATCTGAAA AACCAACCCGATCAAATTTGGTTCCACGACAGAAATATTCCTAGTAAGGAAAATGTTTATTTATTAGATCCATACCATGG GAAAATCATAGGTTCTTTAAAAGAAGATAGAAGTGATAGTTTCTACGGATTTTTGTTGGTGTTACATTACAGTTTATTTA TGGGAGGGATTGGTTATTTCATCACAGGATGTTTTGCCATTGTGTATTTGTTGCTTGTCTTCACTGGGATCAAATTATAC AAACGATTCTGGAAAAGTTTGATTCGTTTACGATGGAAAGAGAGTTCCCAAATTCTATTTTCCGATTTACATAAGTTTGT TGGTATTAACGCAGTTTGGTTTCACCTTATTTTAGGAATTACCGGAGGTTGGTGGAGCATACGTGATACAATCATTCGAA CATATCCAGAAGAAAAGCTTGTACATGGTCTTTGGTCGCAGTCCAAGTCCATTGATCAATTGATCATCAATTGTGAAAAT CAAATCGAAAATTTTCATTTAGGTTATATTTCCTTTCCGCATCATTCAGAAGAGGAACCTATTGGTTTTTATGGGAATTC ATACGATTCGAAAGGATGGGAAAGTCGTTATGGATCTTATGTATTATTTAATGCAGATTCAAATCAAATGATTCGTTTTG TTGATATTTCAAAAGAGGCATTGATCAATCAAATTTTGGATGCCTTCCGGCCTCTCCATTTCGGTACATTTGCAAATCAT ATCAGCAAAATCATATGGGTATTATTTGGATTAACACCTGCAATTTTATCAGTGAGCGGGATTATGGTATTCTATCAAAA AAGGAAAAACAAAAGAAGGTATTTAAATCAAAGAACCCAATCGAATGAATTGGGCTCTTTTGTTCAGCGATGA
Upstream 100 bases:
>100_bases GAGGGAAAAAAGTTTTGGGCGACCGCTCCATCGAAATTTGATACTTGAAATTGAGACCTAATCTCAATAATATGGAAAAA TCAATCTTTAGGAAGCCGAA
Downstream 100 bases:
>100_bases GTTTTTTTAACTATTGCCAGCATTTGCTTGGATCATAACATACATATGTTCCGTTATATCCTTCGCATGCTTCTTTTGCA TTTTTTAGATTGGTAATTCC
Product: putative iron-regulated membrane protein
Products: NA
Alternate protein names: PepSY-Associated TM Helix Domain-Containing Protein; Iron-Regulated Membrane Protein; PepSY-Associated TM Helix; Peptidase; Membrane-Bound Protein; Sulfite Reductase Flavoprotein Component; PepSY-Associated Membrane Protein; PepSY-Associated TM Helix Family; Flavodoxin/Nitric Oxide Synthase; PepSY-Associated TM Helix Family Protein; Sulfite Reductase; Oxidoreductase; Sulfite Reductase Alpha Subunit; Cytoplasmic Membrane Protein; Transporter-Like Membrane Protein; Bifunctional Sulfite Reductase; Amino Acid Carrier Family Protein; Iron-Regulated Transmembrane Protein
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MKAKRWYQLHLILGIFGSSFLLVIGITGSLLVYGKEIQSILSPIEITSNAHRLSFDELYREFKRQVPQGSIAGWLVSDLK NQPDQIWFHDRNIPSKENVYLLDPYHGKIIGSLKEDRSDSFYGFLLVLHYSLFMGGIGYFITGCFAIVYLLLVFTGIKLY KRFWKSLIRLRWKESSQILFSDLHKFVGINAVWFHLILGITGGWWSIRDTIIRTYPEEKLVHGLWSQSKSIDQLIINCEN QIENFHLGYISFPHHSEEEPIGFYGNSYDSKGWESRYGSYVLFNADSNQMIRFVDISKEALINQILDAFRPLHFGTFANH ISKIIWVLFGLTPAILSVSGIMVFYQKRKNKRRYLNQRTQSNELGSFVQR
Sequences:
>Translated_370_residues MKAKRWYQLHLILGIFGSSFLLVIGITGSLLVYGKEIQSILSPIEITSNAHRLSFDELYREFKRQVPQGSIAGWLVSDLK NQPDQIWFHDRNIPSKENVYLLDPYHGKIIGSLKEDRSDSFYGFLLVLHYSLFMGGIGYFITGCFAIVYLLLVFTGIKLY KRFWKSLIRLRWKESSQILFSDLHKFVGINAVWFHLILGITGGWWSIRDTIIRTYPEEKLVHGLWSQSKSIDQLIINCEN QIENFHLGYISFPHHSEEEPIGFYGNSYDSKGWESRYGSYVLFNADSNQMIRFVDISKEALINQILDAFRPLHFGTFANH ISKIIWVLFGLTPAILSVSGIMVFYQKRKNKRRYLNQRTQSNELGSFVQR >Mature_370_residues MKAKRWYQLHLILGIFGSSFLLVIGITGSLLVYGKEIQSILSPIEITSNAHRLSFDELYREFKRQVPQGSIAGWLVSDLK NQPDQIWFHDRNIPSKENVYLLDPYHGKIIGSLKEDRSDSFYGFLLVLHYSLFMGGIGYFITGCFAIVYLLLVFTGIKLY KRFWKSLIRLRWKESSQILFSDLHKFVGINAVWFHLILGITGGWWSIRDTIIRTYPEEKLVHGLWSQSKSIDQLIINCEN QIENFHLGYISFPHHSEEEPIGFYGNSYDSKGWESRYGSYVLFNADSNQMIRFVDISKEALINQILDAFRPLHFGTFANH ISKIIWVLFGLTPAILSVSGIMVFYQKRKNKRRYLNQRTQSNELGSFVQR
Specific function: Unknown
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43045; Mature: 43045
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAKRWYQLHLILGIFGSSFLLVIGITGSLLVYGKEIQSILSPIEITSNAHRLSFDELYR CCCCHHHHHHHHHHHHCCHHEEEEECCCHHEEEHHHHHHHHCHHHHCCCCCCCCHHHHHH EFKRQVPQGSIAGWLVSDLKNQPDQIWFHDRNIPSKENVYLLDPYHGKIIGSLKEDRSDS HHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCCCCHHHCHHHCCCCH FYGFLLVLHYSLFMGGIGYFITGCFAIVYLLLVFTGIKLYKRFWKSLIRLRWKESSQILF HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH SDLHKFVGINAVWFHLILGITGGWWSIRDTIIRTYPEEKLVHGLWSQSKSIDQLIINCEN HHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHH QIENFHLGYISFPHHSEEEPIGFYGNSYDSKGWESRYGSYVLFNADSNQMIRFVDISKEA HHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEECCCCCEEEEEECCHHH LINQILDAFRPLHFGTFANHISKIIWVLFGLTPAILSVSGIMVFYQKRKNKRRYLNQRTQ HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SNELGSFVQR HHHHHHHHCC >Mature Secondary Structure MKAKRWYQLHLILGIFGSSFLLVIGITGSLLVYGKEIQSILSPIEITSNAHRLSFDELYR CCCCHHHHHHHHHHHHCCHHEEEEECCCHHEEEHHHHHHHHCHHHHCCCCCCCCHHHHHH EFKRQVPQGSIAGWLVSDLKNQPDQIWFHDRNIPSKENVYLLDPYHGKIIGSLKEDRSDS HHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCCCCHHHCHHHCCCCH FYGFLLVLHYSLFMGGIGYFITGCFAIVYLLLVFTGIKLYKRFWKSLIRLRWKESSQILF HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH SDLHKFVGINAVWFHLILGITGGWWSIRDTIIRTYPEEKLVHGLWSQSKSIDQLIINCEN HHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHH QIENFHLGYISFPHHSEEEPIGFYGNSYDSKGWESRYGSYVLFNADSNQMIRFVDISKEA HHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEECCCCCEEEEEECCHHH LINQILDAFRPLHFGTFANHISKIIWVLFGLTPAILSVSGIMVFYQKRKNKRRYLNQRTQ HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SNELGSFVQR HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA