| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221771
Identifier: 183221771
GI number: 183221771
Start: 2469507
End: 2470430
Strand: Reverse
Name: 183221771
Synonym: LEPBI_I2401
Alternate gene names: NA
Gene position: 2470430-2469507 (Counterclockwise)
Preceding gene: 183221772
Following gene: 183221770
Centisome position: 68.63
GC content: 46.75
Gene sequence:
>924_bases TTGACTAACACTGGTAGGGCTTTACGATTCCTTCCAGTGTCCAAGAGCCAAGCATATCCTACGATAAGGGAACCAGAAAC TCTTTATCTGGATCTACCGATACACCCACCGTATGACGTCTGTGATGCGTATGATGCCATTGCAATGATGGAAATACCCA TCACCGAAGGTGTGACTTTGGGTTGGAAAGTCAGTCGGATGCAATTTGTGGATGGATTGGGAAGGGATGTTCACTTTGAC TGTCCGAACATTGTCATCACAGGTGGCCAAAACTTAGGACAAAAACCAGTCTCTCTTTATGTGGTGGCTGCGTTCTATGA TGCCGCTGATCGTCTTTTATCTTGCCAAACGTCCGAACACTGTGTCCAAGCTTGGGAGCGGTATGATGTGCCTGGGCTTT GGAGTCGATTTCCTTTTCCAGTTTCTGAAATCGCGCGTGTGACAATGCGCATCACGGTCACTGGTTGTGAAATCCAAACA AGGATGGGGGAAGAAAAACCACCAATCCAATCCAAACCGAACAAAAAAGAATTCAAAAAAGAATGGAAACGCGCTGGGCA TGTCGTTGGCATCCATGGTTTCCAAAAATGGAACCCTGGGAAGGGGGAACTTCTCTATGCAACAGAACCCCTCACCAAAG AAAATCGGCTTCGGTTTCGTTTGGAACGGAGGGAAAACCAAAGATTCCAATTCCTTGCTCTCGTCACATCCACAGACCCA AGTGCAAACGAAACAAAATGGGACAACCTCATCCAATATGTTCTCTATGATGGATCTGGCAGAATTTGCCATGGTGGTTC TTGTATGGGGATGGGAAACCACGGAGAATACGTCTCTCTTGTCCCGATTTTGCCTGAAATTCTCGATTCCGAATCCCTTT CCATCGAATATGTGGTCTGGGAAGGACCTACTGGTACGCTTTAG
Upstream 100 bases:
>100_bases AAGTATTTCGTATCGCCGTATGGGAGAAGAAACGACTGCTACTGTTTCACGTGATGGATTTCTTTCTTTACTCAAAGGTG AACTCAACTAAAGAAATTTC
Downstream 100 bases:
>100_bases TAGGAGAAGTAGGGCAATTCATAAGAAATGTACTTGCATGCCTCGATTTTCATCCGAAATTGGAAATTGAAAGAAATTTC GGAGACTGAATGCAGAAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MTNTGRALRFLPVSKSQAYPTIREPETLYLDLPIHPPYDVCDAYDAIAMMEIPITEGVTLGWKVSRMQFVDGLGRDVHFD CPNIVITGGQNLGQKPVSLYVVAAFYDAADRLLSCQTSEHCVQAWERYDVPGLWSRFPFPVSEIARVTMRITVTGCEIQT RMGEEKPPIQSKPNKKEFKKEWKRAGHVVGIHGFQKWNPGKGELLYATEPLTKENRLRFRLERRENQRFQFLALVTSTDP SANETKWDNLIQYVLYDGSGRICHGGSCMGMGNHGEYVSLVPILPEILDSESLSIEYVVWEGPTGTL
Sequences:
>Translated_307_residues MTNTGRALRFLPVSKSQAYPTIREPETLYLDLPIHPPYDVCDAYDAIAMMEIPITEGVTLGWKVSRMQFVDGLGRDVHFD CPNIVITGGQNLGQKPVSLYVVAAFYDAADRLLSCQTSEHCVQAWERYDVPGLWSRFPFPVSEIARVTMRITVTGCEIQT RMGEEKPPIQSKPNKKEFKKEWKRAGHVVGIHGFQKWNPGKGELLYATEPLTKENRLRFRLERRENQRFQFLALVTSTDP SANETKWDNLIQYVLYDGSGRICHGGSCMGMGNHGEYVSLVPILPEILDSESLSIEYVVWEGPTGTL >Mature_306_residues TNTGRALRFLPVSKSQAYPTIREPETLYLDLPIHPPYDVCDAYDAIAMMEIPITEGVTLGWKVSRMQFVDGLGRDVHFDC PNIVITGGQNLGQKPVSLYVVAAFYDAADRLLSCQTSEHCVQAWERYDVPGLWSRFPFPVSEIARVTMRITVTGCEIQTR MGEEKPPIQSKPNKKEFKKEWKRAGHVVGIHGFQKWNPGKGELLYATEPLTKENRLRFRLERRENQRFQFLALVTSTDPS ANETKWDNLIQYVLYDGSGRICHGGSCMGMGNHGEYVSLVPILPEILDSESLSIEYVVWEGPTGTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34731; Mature: 34600
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNTGRALRFLPVSKSQAYPTIREPETLYLDLPIHPPYDVCDAYDAIAMMEIPITEGVTL CCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHCCEEEEEECCCCCEEE GWKVSRMQFVDGLGRDVHFDCPNIVITGGQNLGQKPVSLYVVAAFYDAADRLLSCQTSEH CEEEHHHHHHHCCCCCEEECCCCEEEECCCCCCCCCEEEEEEEEHHHHHHHHHHCCCHHH CVQAWERYDVPGLWSRFPFPVSEIARVTMRITVTGCEIQTRMGEEKPPIQSKPNKKEFKK HHHHHHHCCCCCHHHCCCCCHHHHCEEEEEEEEECCEEEECCCCCCCCCCCCCCHHHHHH EWKRAGHVVGIHGFQKWNPGKGELLYATEPLTKENRLRFRLERRENQRFQFLALVTSTDP HHHHCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEEEEECCCC SANETKWDNLIQYVLYDGSGRICHGGSCMGMGNHGEYVSLVPILPEILDSESLSIEYVVW CCCCHHHHHEEEEEEECCCCCEEECCCEECCCCCCCEEEEHHHHHHHHCCCCCEEEEEEE EGPTGTL ECCCCCC >Mature Secondary Structure TNTGRALRFLPVSKSQAYPTIREPETLYLDLPIHPPYDVCDAYDAIAMMEIPITEGVTL CCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHCCEEEEEECCCCCEEE GWKVSRMQFVDGLGRDVHFDCPNIVITGGQNLGQKPVSLYVVAAFYDAADRLLSCQTSEH CEEEHHHHHHHCCCCCEEECCCCEEEECCCCCCCCCEEEEEEEEHHHHHHHHHHCCCHHH CVQAWERYDVPGLWSRFPFPVSEIARVTMRITVTGCEIQTRMGEEKPPIQSKPNKKEFKK HHHHHHHCCCCCHHHCCCCCHHHHCEEEEEEEEECCEEEECCCCCCCCCCCCCCHHHHHH EWKRAGHVVGIHGFQKWNPGKGELLYATEPLTKENRLRFRLERRENQRFQFLALVTSTDP HHHHCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEEEEECCCC SANETKWDNLIQYVLYDGSGRICHGGSCMGMGNHGEYVSLVPILPEILDSESLSIEYVVW CCCCHHHHHEEEEEEECCCCCEEECCCEECCCCCCCEEEEHHHHHHHHCCCCCEEEEEEE EGPTGTL ECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA