| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221361
Identifier: 183221361
GI number: 183221361
Start: 2057735
End: 2058427
Strand: Direct
Name: 183221361
Synonym: LEPBI_I1979
Alternate gene names: NA
Gene position: 2057735-2058427 (Clockwise)
Preceding gene: 183221319
Following gene: 183221362
Centisome position: 57.16
GC content: 41.56
Gene sequence:
>693_bases GTGGCGAAACCGTTTGTAGAATTAGAAGCACAAATACCCGATTTAGTAAAGGCAAAATCGAAAATCGTCGTCCGTTCCTC ACGGATGAATCGCCAACTCGAACAATATGTTTTAGGTCTCATCACGAACATCCTTTCGGAAGTGGGCCAATCCCAATTTG TTGAGATGCTATATACCATCTCAAAAGAGCTCACGATCAACGGAATCAAAGCGAACCAAAAACGAGTTTTTTTTGAAGAC GAAGGGCTCGACATCACCGATGAAACAGATTATTTTAAAGGGATCAAAGAATACTCAAAAAAATTCTCGGAAAAGATGGC TGATGAATATGGGAAACGTTGCCTGGCCCGTGGTGTCTATGTGCAAATCAAATTCCATTATTGTTTGGACGGCCTTCTAG TCGAAGTGACAAACAATACTCCCGTCATCAAAACAGAAGAAGTTCGGATGCGGGAAAAAATGAAGAAGTCCATGGGTTAT AATGACATCGCTGAATTTTATATGGACAATATGGACAATACCGAAGGCGCAGGACTTGGGATTGCTCTCATCATGATCCT TCTGAAAAACGAAGGAGTTGATCCCAATTTATTTCGGATCATCACACATGCTGACCGCACCGTTGCTAGGGTTGAAATCC CATTTAACGATAATTATGTGTCGTTTCGAAGCGCAGAACTTGCGGAAATTTAA
Upstream 100 bases:
>100_bases AACAGGAAAATTGGTGAAATTCCTGTGTGATTTTAGTTGTGGATTTCCCGGTTCGATAATAGAACCATGTGGGAAACACC CACCGCATAAGGAATGATTC
Downstream 100 bases:
>100_bases TTCGTAATTCCACCTCCCCTACTCTCCTAGATTTGTATCGACCTAGTGTCCACCCTTTTTGAAACTGGTGGACATGGAAT TAAAAGGTGCAAACATTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MAKPFVELEAQIPDLVKAKSKIVVRSSRMNRQLEQYVLGLITNILSEVGQSQFVEMLYTISKELTINGIKANQKRVFFED EGLDITDETDYFKGIKEYSKKFSEKMADEYGKRCLARGVYVQIKFHYCLDGLLVEVTNNTPVIKTEEVRMREKMKKSMGY NDIAEFYMDNMDNTEGAGLGIALIMILLKNEGVDPNLFRIITHADRTVARVEIPFNDNYVSFRSAELAEI
Sequences:
>Translated_230_residues MAKPFVELEAQIPDLVKAKSKIVVRSSRMNRQLEQYVLGLITNILSEVGQSQFVEMLYTISKELTINGIKANQKRVFFED EGLDITDETDYFKGIKEYSKKFSEKMADEYGKRCLARGVYVQIKFHYCLDGLLVEVTNNTPVIKTEEVRMREKMKKSMGY NDIAEFYMDNMDNTEGAGLGIALIMILLKNEGVDPNLFRIITHADRTVARVEIPFNDNYVSFRSAELAEI >Mature_229_residues AKPFVELEAQIPDLVKAKSKIVVRSSRMNRQLEQYVLGLITNILSEVGQSQFVEMLYTISKELTINGIKANQKRVFFEDE GLDITDETDYFKGIKEYSKKFSEKMADEYGKRCLARGVYVQIKFHYCLDGLLVEVTNNTPVIKTEEVRMREKMKKSMGYN DIAEFYMDNMDNTEGAGLGIALIMILLKNEGVDPNLFRIITHADRTVARVEIPFNDNYVSFRSAELAEI
Specific function: Unknown
COG id: COG1639
COG function: function code T; Predicted signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR013976 [H]
Pfam domain/function: PF02518 HATPase_c; PF08668 HDOD [H]
EC number: NA
Molecular weight: Translated: 26394; Mature: 26263
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKPFVELEAQIPDLVKAKSKIVVRSSRMNRQLEQYVLGLITNILSEVGQSQFVEMLYTI CCCCCHHHHHCCHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKELTINGIKANQKRVFFEDEGLDITDETDYFKGIKEYSKKFSEKMADEYGKRCLARGVY HHHHEEECEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE VQIKFHYCLDGLLVEVTNNTPVIKTEEVRMREKMKKSMGYNDIAEFYMDNMDNTEGAGLG EEEEEEEECCCEEEEECCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHH IALIMILLKNEGVDPNLFRIITHADRTVARVEIPFNDNYVSFRSAELAEI HHHHHHHHHCCCCCCHHHHEEECCCCEEEEEECCCCCCEEEECCCHHHCC >Mature Secondary Structure AKPFVELEAQIPDLVKAKSKIVVRSSRMNRQLEQYVLGLITNILSEVGQSQFVEMLYTI CCCCHHHHHCCHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKELTINGIKANQKRVFFEDEGLDITDETDYFKGIKEYSKKFSEKMADEYGKRCLARGVY HHHHEEECEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE VQIKFHYCLDGLLVEVTNNTPVIKTEEVRMREKMKKSMGYNDIAEFYMDNMDNTEGAGLG EEEEEEEECCCEEEEECCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHH IALIMILLKNEGVDPNLFRIITHADRTVARVEIPFNDNYVSFRSAELAEI HHHHHHHHHCCCCCCHHHHEEECCCCEEEEEECCCCCCEEEECCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]