| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220998
Identifier: 183220998
GI number: 183220998
Start: 1685706
End: 1687208
Strand: Direct
Name: 183220998
Synonym: LEPBI_I1611
Alternate gene names: NA
Gene position: 1685706-1687208 (Clockwise)
Preceding gene: 183220997
Following gene: 183221002
Centisome position: 46.83
GC content: 40.45
Gene sequence:
>1503_bases ATGAAATTCAACTTAGTATTGTTTTGTACAAATTTGAAGAACCTCCCGTTTAGAATTAAAAAAAATACAAAAAATTTGAA ATCCCTTTTAACATTTATGTATGATGATAAGGTGATCTCCAAAAAAACCATTTCCTTGCCAAGTTGGAAACTTCCTCTTT TGGCGTTTGGATTTCTAATGATGGTATTTACATTTCCTTCCTTAGAAGGAAAATCCAAAATCCCTGACAAAAAAAAATCT CCTCATCTCACTTCAGTTCGGCAAACCATTGTTTTATCCATTGATGGATTCCCTGCCTATTACTGGACCGATCCAAAATA CCATGCCTACTTTCCCCATTTAGCAGAGCTCTTCCGAACGTATGGAGTGAATGAAATTGAAACCGTCAATCCATCGGTAA CCTACCCAGCACACACTTCAATGGTGACGGGTATGGATCCTGCGAAACATGGAATTTATAATAATACACTTTCGGATCCT TTTGAAAAGAATGATGGGGGTTGGATGTGGTATGCGGAAGACATTCGAACTCCTACAATTTGGGATTTGGCAAAAAAGAA TCAGAAAACCACAGCCAATGTATTTTGGCCAGTGACGGTCGGTGCCGAAATGGATTGGAATCTTCCTCAGTATTGGCGAA AAAAAAATCCAGAAGATGACAAACTTCTCCGTGCCTTATCCACAAAAGGATTACACAAAGAAATCGAGAAGGCCGTAGGA TCTCCGTTAAACGACGTTTCGAAAGATGAAGTGAAATTAAAAACCGCGACCTGGCTTTTTCAAAAGAAAAAACCAAATTT GATGTTTGTTTATACTACGGATTTAGACACAAACCACCATGGATATGGGCCAGGTTCGGAACGGGCACTCGTTCGGCTTT TGGAATTGGATCAGGCGATCTTAAATTTTTTAAAATCCGTTGGGGCGTTCTCTCCGAAGGGACCCGCCATTGTCATTGTA TCAGATCATGGGTTTGATTCGGCGGATGCGGTTTGTGCTCCCAATGTCATCCTTAAACATCGTGGGTTTTTGAATGAGGA ACAGGCTACCTACCAAATGACCTTTAAAAGTTCAGGTGGCACATCAATCCTCCTTCCCGCAACAAACGCGAAAATTTCCC CAAAAGACATTGATTCCGTTGTGAGTGATGTGTTACAATCCTGTCCAGGGGCAGAGTGGATCCCAAGAAATGAACTTTCT CTTCAAGATGGAAATCTTACGAGTTCAGAGACTTTACATGAGATCCAGACCAAAATCCATCCCGAAGCCTTGGGACTCTT TCGCACATCGCAATCTTTATTCTTTAGTGGAACTAGAAAGGGTGAAGTATGGAGTCAGTCCCAAACAAAAATTCATGGCC ATGGTTATTGGAATGCTCATCCCAAAATGAAGACCATTGGTTTTGTTTATGACCCGAGAGGGAAACAACACAAATTCCAA TCGGTCAAAGATGTATTTGTGATCGTTAAGGATTTGTTGGATTTAAAAGATTCCAAGAGATAA
Upstream 100 bases:
>100_bases AGCATTGAGGACATTCCTGACGAACTCCTCGGTTCCACCAGATCGGAACAAGAATACTGATTTGATTCGCTAAACAGGGT TTATGTGAAGATTAAACCAA
Downstream 100 bases:
>100_bases CGTTCTCGTTTCACCGATAAAGCGACATTTCCTAATTCATTCCGATGTGCCCACCCGATGTTACTTTTGAATTTTAGAGG TTTAGTGTTTTTTCCAATGG
Product: putative hydrolase
Products: NA
Alternate protein names: Nucleotide Pyrophosphatase; Pyrophosphatase; Phosphoglyceromutase/Phosphopentomutase; AP Endonuclease; Phosphodiesterase/Nucleotide Pyrophosphatase Family Protein; Hydrolase
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MKFNLVLFCTNLKNLPFRIKKNTKNLKSLLTFMYDDKVISKKTISLPSWKLPLLAFGFLMMVFTFPSLEGKSKIPDKKKS PHLTSVRQTIVLSIDGFPAYYWTDPKYHAYFPHLAELFRTYGVNEIETVNPSVTYPAHTSMVTGMDPAKHGIYNNTLSDP FEKNDGGWMWYAEDIRTPTIWDLAKKNQKTTANVFWPVTVGAEMDWNLPQYWRKKNPEDDKLLRALSTKGLHKEIEKAVG SPLNDVSKDEVKLKTATWLFQKKKPNLMFVYTTDLDTNHHGYGPGSERALVRLLELDQAILNFLKSVGAFSPKGPAIVIV SDHGFDSADAVCAPNVILKHRGFLNEEQATYQMTFKSSGGTSILLPATNAKISPKDIDSVVSDVLQSCPGAEWIPRNELS LQDGNLTSSETLHEIQTKIHPEALGLFRTSQSLFFSGTRKGEVWSQSQTKIHGHGYWNAHPKMKTIGFVYDPRGKQHKFQ SVKDVFVIVKDLLDLKDSKR
Sequences:
>Translated_500_residues MKFNLVLFCTNLKNLPFRIKKNTKNLKSLLTFMYDDKVISKKTISLPSWKLPLLAFGFLMMVFTFPSLEGKSKIPDKKKS PHLTSVRQTIVLSIDGFPAYYWTDPKYHAYFPHLAELFRTYGVNEIETVNPSVTYPAHTSMVTGMDPAKHGIYNNTLSDP FEKNDGGWMWYAEDIRTPTIWDLAKKNQKTTANVFWPVTVGAEMDWNLPQYWRKKNPEDDKLLRALSTKGLHKEIEKAVG SPLNDVSKDEVKLKTATWLFQKKKPNLMFVYTTDLDTNHHGYGPGSERALVRLLELDQAILNFLKSVGAFSPKGPAIVIV SDHGFDSADAVCAPNVILKHRGFLNEEQATYQMTFKSSGGTSILLPATNAKISPKDIDSVVSDVLQSCPGAEWIPRNELS LQDGNLTSSETLHEIQTKIHPEALGLFRTSQSLFFSGTRKGEVWSQSQTKIHGHGYWNAHPKMKTIGFVYDPRGKQHKFQ SVKDVFVIVKDLLDLKDSKR >Mature_500_residues MKFNLVLFCTNLKNLPFRIKKNTKNLKSLLTFMYDDKVISKKTISLPSWKLPLLAFGFLMMVFTFPSLEGKSKIPDKKKS PHLTSVRQTIVLSIDGFPAYYWTDPKYHAYFPHLAELFRTYGVNEIETVNPSVTYPAHTSMVTGMDPAKHGIYNNTLSDP FEKNDGGWMWYAEDIRTPTIWDLAKKNQKTTANVFWPVTVGAEMDWNLPQYWRKKNPEDDKLLRALSTKGLHKEIEKAVG SPLNDVSKDEVKLKTATWLFQKKKPNLMFVYTTDLDTNHHGYGPGSERALVRLLELDQAILNFLKSVGAFSPKGPAIVIV SDHGFDSADAVCAPNVILKHRGFLNEEQATYQMTFKSSGGTSILLPATNAKISPKDIDSVVSDVLQSCPGAEWIPRNELS LQDGNLTSSETLHEIQTKIHPEALGLFRTSQSLFFSGTRKGEVWSQSQTKIHGHGYWNAHPKMKTIGFVYDPRGKQHKFQ SVKDVFVIVKDLLDLKDSKR
Specific function: Unknown
COG id: COG1524
COG function: function code R; Uncharacterized proteins of the AP superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56619; Mature: 56619
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFNLVLFCTNLKNLPFRIKKNTKNLKSLLTFMYDDKVISKKTISLPSWKLPLLAFGFLM CCEEEEEEEECCCCCCEEEECCHHHHHHHHHHHHCCCHHCCEEECCCCCCHHHHHHHHHH MVFTFPSLEGKSKIPDKKKSPHLTSVRQTIVLSIDGFPAYYWTDPKYHAYFPHLAELFRT HHHHCCCCCCCCCCCCCCCCCCHHHCCEEEEEEECCCCEEEECCCCCEECCHHHHHHHHH YGVNEIETVNPSVTYPAHTSMVTGMDPAKHGIYNNTLSDPFEKNDGGWMWYAEDIRTPTI CCCCCEEECCCCEECCCCCCEECCCCHHHCCCCCCCCCCCCCCCCCCEEEEHHCCCCCCH WDLAKKNQKTTANVFWPVTVGAEMDWNLPQYWRKKNPEDDKLLRALSTKGLHKEIEKAVG HHHHHCCCCCEEEEEEEEEECCCCCCCCHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHC SPLNDVSKDEVKLKTATWLFQKKKPNLMFVYTTDLDTNHHGYGPGSERALVRLLELDQAI CCCCCCCCCCEEEEHHEEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH LNFLKSVGAFSPKGPAIVIVSDHGFDSADAVCAPNVILKHRGFLNEEQATYQMTFKSSGG HHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEECCCC TSILLPATNAKISPKDIDSVVSDVLQSCPGAEWIPRNELSLQDGNLTSSETLHEIQTKIH CEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC PEALGLFRTSQSLFFSGTRKGEVWSQSQTKIHGHGYWNAHPKMKTIGFVYDPRGKQHKFQ HHHHHHHCCCCCCEECCCCCCCCCCCCCCEEEECCEECCCCCCEEEEEEECCCCCCHHHH SVKDVFVIVKDLLDLKDSKR HHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKFNLVLFCTNLKNLPFRIKKNTKNLKSLLTFMYDDKVISKKTISLPSWKLPLLAFGFLM CCEEEEEEEECCCCCCEEEECCHHHHHHHHHHHHCCCHHCCEEECCCCCCHHHHHHHHHH MVFTFPSLEGKSKIPDKKKSPHLTSVRQTIVLSIDGFPAYYWTDPKYHAYFPHLAELFRT HHHHCCCCCCCCCCCCCCCCCCHHHCCEEEEEEECCCCEEEECCCCCEECCHHHHHHHHH YGVNEIETVNPSVTYPAHTSMVTGMDPAKHGIYNNTLSDPFEKNDGGWMWYAEDIRTPTI CCCCCEEECCCCEECCCCCCEECCCCHHHCCCCCCCCCCCCCCCCCCEEEEHHCCCCCCH WDLAKKNQKTTANVFWPVTVGAEMDWNLPQYWRKKNPEDDKLLRALSTKGLHKEIEKAVG HHHHHCCCCCEEEEEEEEEECCCCCCCCHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHC SPLNDVSKDEVKLKTATWLFQKKKPNLMFVYTTDLDTNHHGYGPGSERALVRLLELDQAI CCCCCCCCCCEEEEHHEEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH LNFLKSVGAFSPKGPAIVIVSDHGFDSADAVCAPNVILKHRGFLNEEQATYQMTFKSSGG HHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEECCCC TSILLPATNAKISPKDIDSVVSDVLQSCPGAEWIPRNELSLQDGNLTSSETLHEIQTKIH CEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC PEALGLFRTSQSLFFSGTRKGEVWSQSQTKIHGHGYWNAHPKMKTIGFVYDPRGKQHKFQ HHHHHHHCCCCCCEECCCCCCCCCCCCCCEEEECCEECCCCCCEEEEEEECCCCCCHHHH SVKDVFVIVKDLLDLKDSKR HHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA