Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
---|---|
Accession | NC_010602 |
Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183220573
Identifier: 183220573
GI number: 183220573
Start: 1224516
End: 1225136
Strand: Direct
Name: 183220573
Synonym: LEPBI_I1177
Alternate gene names: NA
Gene position: 1224516-1225136 (Clockwise)
Preceding gene: 183220568
Following gene: 183220576
Centisome position: 34.02
GC content: 37.84
Gene sequence:
>621_bases TTGGTGTTTATTAATGACGATATGAAACGGATACCACAGACCATATTATTCTGCCTATTGTTTTGTGCCTGCGCCGGTGG GAATATCAAAATAAAGATCAATTCAGACCTTTCAGGAGACTTGGTCATTTACCAAAAAAAAATCACAAAAAAACAGAAGG GAATTTTTTTAGGTTCTGGCCTTAAGGATATAGGGGAAGTGGAGATCACTTTAAAAGAAAGATCTTACCAATTTGGAAAC TACACCCAAATGTTACCTCCTGGATTTCGTTTCATTCAATTTACCGAAGACCAAACACTTGAGATCCAACTCGCCATTGA CACAAGTAAGGACTCACCATTATTACAAACTCTTGAGATCAATCGAGAGGAAATCGGTTCCATTCTATCTGAAGCAAAAT TAAGAGATGACCTTTTGCGATTTAATACCTTGGTTGAATTCATTCAATTTGAAGTTCATTTTCCATTTCCTATCGCGAAG GTTAAATTTTTAGATCCAAGGACTGCGGGTGAGTGGACCGTGCGCTTAGACAATCCCAATAAATTGATCGTGAACCTTCC ATTACATTCTGTTTGGGCAGGTGAACACACTTTGACTGTCGTACAAATTTATCCTGAATGA
Upstream 100 bases:
>100_bases TTTTGCAAATCGGTGGTAATAATGGGATTCAAGCGAGATGTCTCTCGTTTTTCCATGAAACTGTTTCGGATAGATCATTT TTTAGTTCTGTAAACTTCGC
Downstream 100 bases:
>100_bases AATTTTAAGGTTTATGAAAGTATTCTGAATTCAGCTTTTGAATGATTGCTTTTAATACCTTTCTTCGCTCTTCTTGGTTG GGGAGTCGTTCTTTTAGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MVFINDDMKRIPQTILFCLLFCACAGGNIKIKINSDLSGDLVIYQKKITKKQKGIFLGSGLKDIGEVEITLKERSYQFGN YTQMLPPGFRFIQFTEDQTLEIQLAIDTSKDSPLLQTLEINREEIGSILSEAKLRDDLLRFNTLVEFIQFEVHFPFPIAK VKFLDPRTAGEWTVRLDNPNKLIVNLPLHSVWAGEHTLTVVQIYPE
Sequences:
>Translated_206_residues MVFINDDMKRIPQTILFCLLFCACAGGNIKIKINSDLSGDLVIYQKKITKKQKGIFLGSGLKDIGEVEITLKERSYQFGN YTQMLPPGFRFIQFTEDQTLEIQLAIDTSKDSPLLQTLEINREEIGSILSEAKLRDDLLRFNTLVEFIQFEVHFPFPIAK VKFLDPRTAGEWTVRLDNPNKLIVNLPLHSVWAGEHTLTVVQIYPE >Mature_206_residues MVFINDDMKRIPQTILFCLLFCACAGGNIKIKINSDLSGDLVIYQKKITKKQKGIFLGSGLKDIGEVEITLKERSYQFGN YTQMLPPGFRFIQFTEDQTLEIQLAIDTSKDSPLLQTLEINREEIGSILSEAKLRDDLLRFNTLVEFIQFEVHFPFPIAK VKFLDPRTAGEWTVRLDNPNKLIVNLPLHSVWAGEHTLTVVQIYPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23563; Mature: 23563
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFINDDMKRIPQTILFCLLFCACAGGNIKIKINSDLSGDLVIYQKKITKKQKGIFLGSG CEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEHHHHHHCCEEEECC LKDIGEVEITLKERSYQFGNYTQMLPPGFRFIQFTEDQTLEIQLAIDTSKDSPLLQTLEI CCCCCEEEEEEEECCEECCCEEECCCCCCEEEEECCCCEEEEEEEEECCCCCCEEEEEEC NREEIGSILSEAKLRDDLLRFNTLVEFIQFEVHFPFPIAKVKFLDPRTAGEWTVRLDNPN CHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEECCCCCCEEEEEECCCC KLIVNLPLHSVWAGEHTLTVVQIYPE EEEEECCCHHEECCCCEEEEEEEECC >Mature Secondary Structure MVFINDDMKRIPQTILFCLLFCACAGGNIKIKINSDLSGDLVIYQKKITKKQKGIFLGSG CEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEHHHHHHCCEEEECC LKDIGEVEITLKERSYQFGNYTQMLPPGFRFIQFTEDQTLEIQLAIDTSKDSPLLQTLEI CCCCCEEEEEEEECCEECCCEEECCCCCCEEEEECCCCEEEEEEEEECCCCCCEEEEEEC NREEIGSILSEAKLRDDLLRFNTLVEFIQFEVHFPFPIAKVKFLDPRTAGEWTVRLDNPN CHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEECCCCCCEEEEEECCCC KLIVNLPLHSVWAGEHTLTVVQIYPE EEEEECCCHHEECCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA