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The map label for this gene is atpH

Identifier: 183220212

GI number: 183220212

Start: 818354

End: 818917

Strand: Direct

Name: atpH

Synonym: LEPBI_I0804

Alternate gene names: 183220212

Gene position: 818354-818917 (Clockwise)

Preceding gene: 183220211

Following gene: 183220213

Centisome position: 22.73

GC content: 40.6

Gene sequence:

>564_bases
ATGAGTCTGAACCAAATTTCAAAGGTTTACGCAACGGCACTTTTGGAGTTAGCACAAGAAGCTAACTCACTTGAGTCAAC
GGAAGAGGAATTATCAAGCTTAGTTGGTGTTTTCTTTTCCGATGACACAATACGCCATTATTTTCTTTCTCCGTTAGTTG
ATCCTTCTGAGAAAGAACAAACTGCCGCAAAGTCAGTTCAAGGAAAGGCATCAGAAATTGTTGCCAATTTCATTACTCTT
GTGGTTCGAAAAAATCGTTTCCTTTACCTAAAGGACATTTTGGAAGATTACCGATCAGGTGTAGACCGACTTAAAAATCG
TAGTTCACTTCGTATCGTTTCCAAAGATTCATTAGGAAAAGAAGCAGTAGATCAAATCACTAAGTCCATCTCTTCCAAGT
TCGGACGCGAAGTTCGTGTCACAGAACATACGGATCTTAACCTCATCGGTGGATTCAAAATCTATATAGACGACTTTTTA
ATCGATGCCTCAATCCGTGCAAAACTTGCCGGAACCCGTGAGGCTCTCCTCCAAAAGAAAATCCCAGTCGGAGCATTTGA
ATGA

Upstream 100 bases:

>100_bases
TTCTCATCGCGAGTGAGATCTTGGAGAAACAATTGAAGAAGGAAGACTATGCTTCCTTTGTCGAAAAAGAGATCGCAAAA
CTCGATAAACTTAAAATCAA

Downstream 100 bases:

>100_bases
AAATTAAAACAGACGAAGTAACGTCGGTACTAAAACAAGAAATTAAAAACTTCAAGAAAGACCTCCAAGTAGAAGAGGTT
GGAACAGTTCTCGAAGTCGG

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MSLNQISKVYATALLELAQEANSLESTEEELSSLVGVFFSDDTIRHYFLSPLVDPSEKEQTAAKSVQGKASEIVANFITL
VVRKNRFLYLKDILEDYRSGVDRLKNRSSLRIVSKDSLGKEAVDQITKSISSKFGREVRVTEHTDLNLIGGFKIYIDDFL
IDASIRAKLAGTREALLQKKIPVGAFE

Sequences:

>Translated_187_residues
MSLNQISKVYATALLELAQEANSLESTEEELSSLVGVFFSDDTIRHYFLSPLVDPSEKEQTAAKSVQGKASEIVANFITL
VVRKNRFLYLKDILEDYRSGVDRLKNRSSLRIVSKDSLGKEAVDQITKSISSKFGREVRVTEHTDLNLIGGFKIYIDDFL
IDASIRAKLAGTREALLQKKIPVGAFE
>Mature_186_residues
SLNQISKVYATALLELAQEANSLESTEEELSSLVGVFFSDDTIRHYFLSPLVDPSEKEQTAAKSVQGKASEIVANFITLV
VRKNRFLYLKDILEDYRSGVDRLKNRSSLRIVSKDSLGKEAVDQITKSISSKFGREVRVTEHTDLNLIGGFKIYIDDFLI
DASIRAKLAGTREALLQKKIPVGAFE

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_LEPBA (B0SDA2)

Other databases:

- EMBL:   CP000777
- RefSeq:   YP_001961885.1
- GeneID:   6389284
- GenomeReviews:   CP000777_GR
- KEGG:   lbf:LBF_0775
- HOGENOM:   HBG530524
- OMA:   GNLIENY
- ProtClustDB:   PRK13434
- BioCyc:   LBIF355278:LBF_0775-MONOMER
- HAMAP:   MF_01416
- InterPro:   IPR000711
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 20889; Mature: 20758

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLNQISKVYATALLELAQEANSLESTEEELSSLVGVFFSDDTIRHYFLSPLVDPSEKEQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHH
TAAKSVQGKASEIVANFITLVVRKNRFLYLKDILEDYRSGVDRLKNRSSLRIVSKDSLGK
HHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCH
EAVDQITKSISSKFGREVRVTEHTDLNLIGGFKIYIDDFLIDASIRAKLAGTREALLQKK
HHHHHHHHHHHHHHCCEEEEECCCCCEEECCHHEEHHHHHHHHHHHHHHHHHHHHHHHHC
IPVGAFE
CCCCCCC
>Mature Secondary Structure 
SLNQISKVYATALLELAQEANSLESTEEELSSLVGVFFSDDTIRHYFLSPLVDPSEKEQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHH
TAAKSVQGKASEIVANFITLVVRKNRFLYLKDILEDYRSGVDRLKNRSSLRIVSKDSLGK
HHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCH
EAVDQITKSISSKFGREVRVTEHTDLNLIGGFKIYIDDFLIDASIRAKLAGTREALLQKK
HHHHHHHHHHHHHHCCEEEEECCCCCEEECCHHEEHHHHHHHHHHHHHHHHHHHHHHHHC
IPVGAFE
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA