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The map label for this gene is atpF

Identifier: 183220211

GI number: 183220211

Start: 817833

End: 818357

Strand: Direct

Name: atpF

Synonym: LEPBI_I0803

Alternate gene names: 183220211

Gene position: 817833-818357 (Clockwise)

Preceding gene: 183220210

Following gene: 183220212

Centisome position: 22.72

GC content: 42.48

Gene sequence:

>525_bases
TTGGTACTCCTCGCGGCTTCCGGCTTCAATTTGCTGAAAGTCAATCCGGGTCTGGTCATCTGGACCCTGGTCACTTTCTC
AGTTGTTGTCTTCGTTCTTAAAAAATTTGCATGGGACAAGATCCTTCATGCTCTCGAAGAACGTGCTTCCGGCATCCAAG
GTGATATCAACAAAGCAGAATCTCTTCGTGTTGAAGCAGAAAAGTCTTTAAAAGAATACAAAGACCAACTCTTCAAAGCA
ACAGAAGAAGCACACAGAATTGTCGATGAAGCTAAGAAAGATGCAGTTGCTCTCCGCACAAAGTTGACGGAAGAAGCACA
CAATGAAGTAAAAGGAATCAAAGACAGCGCTGTTCGCGAAATCGAACTTGCCAAAGGCAGAGCTTTGTCTGAAATCCAAA
ACCAAATTGTGGAAATGTCCGTTCTCATCGCGAGTGAGATCTTGGAGAAACAATTGAAGAAGGAAGACTATGCTTCCTTT
GTCGAAAAAGAGATCGCAAAACTCGATAAACTTAAAATCAAATGA

Upstream 100 bases:

>100_bases
TCGCAGTGGTAATCGCTCTTCTTATCGCGCTCAAACTCAATGGCTCAATTGACAAAACAATTGGTGCTGGTGCCACTAAA
GTAGAACAAGGACAATAGTC

Downstream 100 bases:

>100_bases
GTCTGAACCAAATTTCAAAGGTTTACGCAACGGCACTTTTGGAGTTAGCACAAGAAGCTAACTCACTTGAGTCAACGGAA
GAGGAATTATCAAGCTTAGT

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MVLLAASGFNLLKVNPGLVIWTLVTFSVVVFVLKKFAWDKILHALEERASGIQGDINKAESLRVEAEKSLKEYKDQLFKA
TEEAHRIVDEAKKDAVALRTKLTEEAHNEVKGIKDSAVREIELAKGRALSEIQNQIVEMSVLIASEILEKQLKKEDYASF
VEKEIAKLDKLKIK

Sequences:

>Translated_174_residues
MVLLAASGFNLLKVNPGLVIWTLVTFSVVVFVLKKFAWDKILHALEERASGIQGDINKAESLRVEAEKSLKEYKDQLFKA
TEEAHRIVDEAKKDAVALRTKLTEEAHNEVKGIKDSAVREIELAKGRALSEIQNQIVEMSVLIASEILEKQLKKEDYASF
VEKEIAKLDKLKIK
>Mature_174_residues
MVLLAASGFNLLKVNPGLVIWTLVTFSVVVFVLKKFAWDKILHALEERASGIQGDINKAESLRVEAEKSLKEYKDQLFKA
TEEAHRIVDEAKKDAVALRTKLTEEAHNEVKGIKDSAVREIELAKGRALSEIQNQIVEMSVLIASEILEKQLKKEDYASF
VEKEIAKLDKLKIK

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_LEPBA (B0SDA1)

Other databases:

- EMBL:   CP000777
- RefSeq:   YP_001961884.1
- GeneID:   6387860
- GenomeReviews:   CP000777_GR
- KEGG:   lbf:LBF_0774
- HOGENOM:   HBG617328
- OMA:   IRIMNER
- ProtClustDB:   PRK13460
- BioCyc:   LBIF355278:LBF_0774-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 19602; Mature: 19602

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x15ce68a8)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLLAASGFNLLKVNPGLVIWTLVTFSVVVFVLKKFAWDKILHALEERASGIQGDINKAE
CEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
SLRVEAEKSLKEYKDQLFKATEEAHRIVDEAKKDAVALRTKLTEEAHNEVKGIKDSAVRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
IELAKGRALSEIQNQIVEMSVLIASEILEKQLKKEDYASFVEKEIAKLDKLKIK
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MVLLAASGFNLLKVNPGLVIWTLVTFSVVVFVLKKFAWDKILHALEERASGIQGDINKAE
CEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
SLRVEAEKSLKEYKDQLFKATEEAHRIVDEAKKDAVALRTKLTEEAHNEVKGIKDSAVRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
IELAKGRALSEIQNQIVEMSVLIASEILEKQLKKEDYASFVEKEIAKLDKLKIK
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA