Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220192
Identifier: 183220192
GI number: 183220192
Start: 799840
End: 801117
Strand: Reverse
Name: 183220192
Synonym: LEPBI_I0782
Alternate gene names: NA
Gene position: 801117-799840 (Counterclockwise)
Preceding gene: 183220193
Following gene: 183220189
Centisome position: 22.26
GC content: 39.44
Gene sequence:
>1278_bases GTGATCCAAATCCTCATCAATTCCCTTGCTGGGAAAACCGTATCCCTCACCCAAAAAACAACAGACTCTCTCTTAAAAGG CGTGCAGTTCTTAGTCCATGGCAGCCTCACAAAAACGGGTGATGGACTCGATCTATTGTCCAATGCATTTTTCTACAAAC CAGAATGGAGGGATTCTCTCCAAAAACTCGGTGTACAAGTCCGAGACACGGGGTTACGTTCCAATGAAGAATTACAAAAA ACAATCGAACTCACAAACCAAGCCTTTGATAAGGCACTCTTTAAGGTAGAACTCACCGCCAAAAAATCTGATGATATGGT GTTTGATAACCGAATGGTTTCCAGTATATTAGGAAGTTCTCATAATCAAAAATTCAAACTCACAAAAATTGATATGAGTT TTCGCACATTTGGTAAAGACATCACGGCCAAAGAAACCATTTCCGAATTCCAAACTTCTGGCAAAACCAAATCTGTAATT TTCCTACCAGGTCTTTTTACTGATGAATCAGTTTGGCAAGAACAAACGGTGGAATACAAAAATAGACAAATCAAATCCCC AGGCCTTGCCACTGAACTTGAGGAATGTGGTTACTTTTCGTTTTACCTTCGTTACAACCATGGCCTTCCCATCCATGAAA ATGGGAAAAAACTCATGCACCTTTTGGATGTTTTTTTTGAAGAAAATAAGGAGATCAAACCAGATATCATTTGTTATAGT TTGGGTTGTCTCATCTTTCGGTCTTGTCTCTATTATGCAAAATTGGAAAACAAACCATGGATCACAAGGTTTGGTCGCAT CACACTCATTGCCGCACCAAACAAAGGTTCGTATTTGGAAAAAATTGGTTTTTGGCTCGGCTTTTTGTTTGAAAAAAGTC CCAATGTTGCCATGAAAATCATTGGTATGATTGGAAACCTAAGGAGTGATGCCATCAAAGATTTATCCTTTGGTCTCATT CGAAAGGAAGAAAAAGGATGGAAGGAAACCATATCCGGATATTTTTCCGAAACCTATTTTGGTGAGTTAGATGATTTGGA TGTCTACCAAGCCTATGCTCTTATGGAAGGACCCGAGAACCCATTACAAAATTTTTTGGGTGATGGCATTGTAGAGAAAA AAAGCCTCACTTATCTGACAGACAAAGTCTTCGACAAAAAAACAAACCCAAGTTTACGCACCTTGGAACTGAAAAAACAA AATCATTTTTCTATCATTAGCTCACGTCCCCTCATCCATTGGGTGAAAGAAGTGTTCGGGGTGGCACCAAAGGCCTAA
Upstream 100 bases:
>100_bases GGTGTTTCATGCCAATCCCATTTCCTTCCACCACCAAAAACGAATCCCTCTCCCCATTTTCTTCTCGCTTTCTCTCCAAA ACTCAGTAAACTGATCCACC
Downstream 100 bases:
>100_bases GCTAAGCAGAGGCAAGTGTTTCCAGATGTACTTTTACGGATTCCGAAAGTGCTTGGAAATCATACCCACCTTCCAGAAAC GAGAGCAGTTTCCCACCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: PGAP1-Like; PGAP1-Like Protein
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MIQILINSLAGKTVSLTQKTTDSLLKGVQFLVHGSLTKTGDGLDLLSNAFFYKPEWRDSLQKLGVQVRDTGLRSNEELQK TIELTNQAFDKALFKVELTAKKSDDMVFDNRMVSSILGSSHNQKFKLTKIDMSFRTFGKDITAKETISEFQTSGKTKSVI FLPGLFTDESVWQEQTVEYKNRQIKSPGLATELEECGYFSFYLRYNHGLPIHENGKKLMHLLDVFFEENKEIKPDIICYS LGCLIFRSCLYYAKLENKPWITRFGRITLIAAPNKGSYLEKIGFWLGFLFEKSPNVAMKIIGMIGNLRSDAIKDLSFGLI RKEEKGWKETISGYFSETYFGELDDLDVYQAYALMEGPENPLQNFLGDGIVEKKSLTYLTDKVFDKKTNPSLRTLELKKQ NHFSIISSRPLIHWVKEVFGVAPKA
Sequences:
>Translated_425_residues MIQILINSLAGKTVSLTQKTTDSLLKGVQFLVHGSLTKTGDGLDLLSNAFFYKPEWRDSLQKLGVQVRDTGLRSNEELQK TIELTNQAFDKALFKVELTAKKSDDMVFDNRMVSSILGSSHNQKFKLTKIDMSFRTFGKDITAKETISEFQTSGKTKSVI FLPGLFTDESVWQEQTVEYKNRQIKSPGLATELEECGYFSFYLRYNHGLPIHENGKKLMHLLDVFFEENKEIKPDIICYS LGCLIFRSCLYYAKLENKPWITRFGRITLIAAPNKGSYLEKIGFWLGFLFEKSPNVAMKIIGMIGNLRSDAIKDLSFGLI RKEEKGWKETISGYFSETYFGELDDLDVYQAYALMEGPENPLQNFLGDGIVEKKSLTYLTDKVFDKKTNPSLRTLELKKQ NHFSIISSRPLIHWVKEVFGVAPKA >Mature_425_residues MIQILINSLAGKTVSLTQKTTDSLLKGVQFLVHGSLTKTGDGLDLLSNAFFYKPEWRDSLQKLGVQVRDTGLRSNEELQK TIELTNQAFDKALFKVELTAKKSDDMVFDNRMVSSILGSSHNQKFKLTKIDMSFRTFGKDITAKETISEFQTSGKTKSVI FLPGLFTDESVWQEQTVEYKNRQIKSPGLATELEECGYFSFYLRYNHGLPIHENGKKLMHLLDVFFEENKEIKPDIICYS LGCLIFRSCLYYAKLENKPWITRFGRITLIAAPNKGSYLEKIGFWLGFLFEKSPNVAMKIIGMIGNLRSDAIKDLSFGLI RKEEKGWKETISGYFSETYFGELDDLDVYQAYALMEGPENPLQNFLGDGIVEKKSLTYLTDKVFDKKTNPSLRTLELKKQ NHFSIISSRPLIHWVKEVFGVAPKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48493; Mature: 48493
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQILINSLAGKTVSLTQKTTDSLLKGVQFLVHGSLTKTGDGLDLLSNAFFYKPEWRDSL CCEEEEEHHCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCEECCHHHHHH QKLGVQVRDTGLRSNEELQKTIELTNQAFDKALFKVELTAKKSDDMVFDNRMVSSILGSS HHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHCCC HNQKFKLTKIDMSFRTFGKDITAKETISEFQTSGKTKSVIFLPGLFTDESVWQEQTVEYK CCCEEEEEEEECHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHH NRQIKSPGLATELEECGYFSFYLRYNHGLPIHENGKKLMHLLDVFFEENKEIKPDIICYS HCCCCCCCCHHHHHHCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHH LGCLIFRSCLYYAKLENKPWITRFGRITLIAAPNKGSYLEKIGFWLGFLFEKSPNVAMKI HHHHHHHHHHHHHHCCCCCCEEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHH IGMIGNLRSDAIKDLSFGLIRKEEKGWKETISGYFSETYFGELDDLDVYQAYALMEGPEN HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCH PLQNFLGDGIVEKKSLTYLTDKVFDKKTNPSLRTLELKKQNHFSIISSRPLIHWVKEVFG HHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHHHC VAPKA CCCCC >Mature Secondary Structure MIQILINSLAGKTVSLTQKTTDSLLKGVQFLVHGSLTKTGDGLDLLSNAFFYKPEWRDSL CCEEEEEHHCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCEECCHHHHHH QKLGVQVRDTGLRSNEELQKTIELTNQAFDKALFKVELTAKKSDDMVFDNRMVSSILGSS HHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHCCC HNQKFKLTKIDMSFRTFGKDITAKETISEFQTSGKTKSVIFLPGLFTDESVWQEQTVEYK CCCEEEEEEEECHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHH NRQIKSPGLATELEECGYFSFYLRYNHGLPIHENGKKLMHLLDVFFEENKEIKPDIICYS HCCCCCCCCHHHHHHCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHH LGCLIFRSCLYYAKLENKPWITRFGRITLIAAPNKGSYLEKIGFWLGFLFEKSPNVAMKI HHHHHHHHHHHHHHCCCCCCEEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHH IGMIGNLRSDAIKDLSFGLIRKEEKGWKETISGYFSETYFGELDDLDVYQAYALMEGPEN HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCH PLQNFLGDGIVEKKSLTYLTDKVFDKKTNPSLRTLELKKQNHFSIISSRPLIHWVKEVFG HHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHHHC VAPKA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA