Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220189
Identifier: 183220189
GI number: 183220189
Start: 797297
End: 798256
Strand: Reverse
Name: 183220189
Synonym: LEPBI_I0779
Alternate gene names: NA
Gene position: 798256-797297 (Counterclockwise)
Preceding gene: 183220192
Following gene: 183220182
Centisome position: 22.18
GC content: 42.71
Gene sequence:
>960_bases ATGAAACCACTATTTTCATTTCTCTTATTGTTTGTATTTGTCTCTTGCCAATCCATTTCCCAGACGAAGGGCCAAGAAAG ATCTGGTTCCGTAAACGAAACTCCTGAATTCATTGAAGGGTTATACATCAATACCAAAACCATTCGTGACAAAAAACGTT GGACCTTACTATTTCAAGTCATGAAGGACGCAGGCATGAACACGGCGGTCGTGGACATGCAACCTCACCCTCCTACGCCA GAACAAGTGGCAGAGGCAAAGGCACTCGGGATTTATATGGTCGCTCGCGTCGTAAACTTTGAAGGTGGACTGACAGAAAA ATCACCAAACGCAAGTTTAATGGCATCCATCCAAAAATCCATTCGTAAGGCTTGTGAATTGGGATTTCCCGAAATACAAT TGGATTACATTCGGTACGCTGATGGTGGCACAAACTTCAGTATGAGTTATGAAAAACGGTATGAATCTATTTTAGGTATC GTAGCGGAACACAAAGAAAAAACGAAAGAGGTTTGTCCAAGTGATACCAAATGGACGGCCGATATTTTTGGAAGGGTTCC TTTCATTCAAAACGATGTCATTGGCCAAAAGGTAGAACCGTTTAGCGAAGTACTCCATGGATTGTATCCCATGCTCTATC CATCTCATTTTTATGGACTGACAAAACGTGTCGCCGACCCCTATGGAACCATCAAGGACGGACTCGACCTCACAGTCCAA CGAGCCAAACCAGGTACAAAGGCCATCGCTTGGGTACAAGGTTTTAATATGATGGTTGGCCCAAGTAAATTGAGTTATAC GGATTATATCAAAGTACAAATGCAAGGTGCTCGTGATTCCGCAGGGCATGGGTTCATCGTATGGAATGCAGGAAATGAAT ACTTAGAAACCATGAATGCCTACGAGAAATACAAAAAAGAACCCACTCCGAGTCAAATGAACCTAACAAAAAGTGAGTAA
Upstream 100 bases:
>100_bases GAGATTTCTATCATGCCCAAATTTTAAAAGGGCAAGGGAATTTCGTCAATCGATTCGATTTGAATTTTCATTCATAGGGA AAAAACTTGTCATAACTGCT
Downstream 100 bases:
>100_bases CACGAAGCGGCTTTATTTGCCCGCTTCCTCAATGTTTTTTCTGCGGAGATAGGCATCGGCTTCTTCTTCGGATCCCAAGA TTTGGATCCGAAGTTCCTTC
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MKPLFSFLLLFVFVSCQSISQTKGQERSGSVNETPEFIEGLYINTKTIRDKKRWTLLFQVMKDAGMNTAVVDMQPHPPTP EQVAEAKALGIYMVARVVNFEGGLTEKSPNASLMASIQKSIRKACELGFPEIQLDYIRYADGGTNFSMSYEKRYESILGI VAEHKEKTKEVCPSDTKWTADIFGRVPFIQNDVIGQKVEPFSEVLHGLYPMLYPSHFYGLTKRVADPYGTIKDGLDLTVQ RAKPGTKAIAWVQGFNMMVGPSKLSYTDYIKVQMQGARDSAGHGFIVWNAGNEYLETMNAYEKYKKEPTPSQMNLTKSE
Sequences:
>Translated_319_residues MKPLFSFLLLFVFVSCQSISQTKGQERSGSVNETPEFIEGLYINTKTIRDKKRWTLLFQVMKDAGMNTAVVDMQPHPPTP EQVAEAKALGIYMVARVVNFEGGLTEKSPNASLMASIQKSIRKACELGFPEIQLDYIRYADGGTNFSMSYEKRYESILGI VAEHKEKTKEVCPSDTKWTADIFGRVPFIQNDVIGQKVEPFSEVLHGLYPMLYPSHFYGLTKRVADPYGTIKDGLDLTVQ RAKPGTKAIAWVQGFNMMVGPSKLSYTDYIKVQMQGARDSAGHGFIVWNAGNEYLETMNAYEKYKKEPTPSQMNLTKSE >Mature_319_residues MKPLFSFLLLFVFVSCQSISQTKGQERSGSVNETPEFIEGLYINTKTIRDKKRWTLLFQVMKDAGMNTAVVDMQPHPPTP EQVAEAKALGIYMVARVVNFEGGLTEKSPNASLMASIQKSIRKACELGFPEIQLDYIRYADGGTNFSMSYEKRYESILGI VAEHKEKTKEVCPSDTKWTADIFGRVPFIQNDVIGQKVEPFSEVLHGLYPMLYPSHFYGLTKRVADPYGTIKDGLDLTVQ RAKPGTKAIAWVQGFNMMVGPSKLSYTDYIKVQMQGARDSAGHGFIVWNAGNEYLETMNAYEKYKKEPTPSQMNLTKSE
Specific function: Unknown
COG id: COG1306
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35895; Mature: 35895
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPLFSFLLLFVFVSCQSISQTKGQERSGSVNETPEFIEGLYINTKTIRDKKRWTLLFQV CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCEEEEHHHHHHHHHHHHHHHH MKDAGMNTAVVDMQPHPPTPEQVAEAKALGIYMVARVVNFEGGLTEKSPNASLMASIQKS HHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH IRKACELGFPEIQLDYIRYADGGTNFSMSYEKRYESILGIVAEHKEKTKEVCPSDTKWTA HHHHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH DIFGRVPFIQNDVIGQKVEPFSEVLHGLYPMLYPSHFYGLTKRVADPYGTIKDGLDLTVQ HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHCCCCEEEE RAKPGTKAIAWVQGFNMMVGPSKLSYTDYIKVQMQGARDSAGHGFIVWNAGNEYLETMNA CCCCCCHHHHHHHCCCEEECCCCCCCEEEEEEEEECCCCCCCCEEEEECCCHHHHHHHHH YEKYKKEPTPSQMNLTKSE HHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MKPLFSFLLLFVFVSCQSISQTKGQERSGSVNETPEFIEGLYINTKTIRDKKRWTLLFQV CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCEEEEHHHHHHHHHHHHHHHH MKDAGMNTAVVDMQPHPPTPEQVAEAKALGIYMVARVVNFEGGLTEKSPNASLMASIQKS HHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH IRKACELGFPEIQLDYIRYADGGTNFSMSYEKRYESILGIVAEHKEKTKEVCPSDTKWTA HHHHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH DIFGRVPFIQNDVIGQKVEPFSEVLHGLYPMLYPSHFYGLTKRVADPYGTIKDGLDLTVQ HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHCCCCEEEE RAKPGTKAIAWVQGFNMMVGPSKLSYTDYIKVQMQGARDSAGHGFIVWNAGNEYLETMNA CCCCCCHHHHHHHCCCEEECCCCCCCEEEEEEEEECCCCCCCCEEEEECCCHHHHHHHHH YEKYKKEPTPSQMNLTKSE HHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA