Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220193
Identifier: 183220193
GI number: 183220193
Start: 801350
End: 802606
Strand: Reverse
Name: 183220193
Synonym: LEPBI_I0783
Alternate gene names: NA
Gene position: 802606-801350 (Counterclockwise)
Preceding gene: 183220194
Following gene: 183220192
Centisome position: 22.3
GC content: 41.93
Gene sequence:
>1257_bases ATGTGTTGGAATCGGTTATTTTCTATTGTGTTCACATTGAGTCTGCTTTCCTGTAATCCTGTAAAATCAAATGATGCGTT TGTATTTACGCTGATCAATGGTCTAACCACAACGGCAACCAATTCGTTTTTAATTGGAAGTTCCTCGAAAATCAATGTGA CAAGTGCAAGTGTGGTATTGTATTTTGGAACCCCACAATTGTTTGGATTTTCACTCGTAAAACAACCCACAGCAAACGTT GTGCTTTCTTTCACCAATGCAAAGTTAGATGCCATCGGCAATTTGACATTCACATCTGGCAATTATAATTTCCCTCAATT GATTACACTCGATTCCAATACAGAAATTATGGAAACATCAATCTTGTATGTGAACGTTGCAAGTGCCGATCCAGAATTCA ACGGAATCAGTGGCCAAATTCCCATTTATCATCGAAATGTCGTCATCACGTATACAGGCAGTTCTTTTATCTTTAAAGAA GACAATGTAGCACCGACTCTCACTCCTACACTAGGATTCCCTATTACTAGTTGTTCCGTGTTACCTGCACTCCCCAATGG ACTCACGCTGAATACAAGCACATGTGTGATATCCGGTACACCGACGGATCCAAATCCGCTACCAGGTTCCACATACACAA TCACAGCAACGGATGGACCAAATACTGATACAGAAAATATAACCATCAGTGTGGAACCGACAATTTATAAAGTTTTTGTC ACGGCATCTACATTTAATGGAAATCTCCAAGGGGCCGAGGCAAATGGTCCCGCAGGTGCTGATGTAAAATGTAATGCAGA TGCCAACAAACCATCAACTGGAACTTACAAAGCGATGGTAGTTGATGGAACCAATCGGAGTGCATGTAGTTCACCAAATT GTAGTGGTGGCGCCGGTGAAAACTTATTCTGGGTCTTTCAAGAAAATAGTATTTATGTAAGGGCAAATGATTCTGCGTCT TTGTTCACTCCAAGTACAGCGGGCATCATTCCAGCACCAAGCACGATTCTAAATCATAATTTTGATTCCGGTACTACAAA ATATTTTTGGACTGGATTTGCAATGACCGCATATTGGCAAGAAGCAACAGATGAGCCAACAAATAGCTGTGTTGATTGGA CCGATGGTTCTGTAACAGCGGTTACTACAGATGGTGGTCGTGTGGGTGCATCTGACAGTAGGACTTATTCTGCCTTTCGA TCAGGAAGTGGTCGAAGTTGCAGCGACACCTACCACCTCCTCTGCGTTGAACAGTAA
Upstream 100 bases:
>100_bases CGTTACCTTTCCGAAGAATTTCACTTGTAAGTCCTTCTCTTTTCGCCGATCTTTGAGAAAGGGGTTTCCCTAATTTGTTG TAAGGATCAGGGAGGGCAAG
Downstream 100 bases:
>100_bases GCAGTGAAATTCAAGTCTTAAAATCTAAATTGCATATCCAAAGAAAGAAAACCAAACTGGCCAGTGTCCAAGAAGTTTTG AACCTGTGATGGCAATCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MCWNRLFSIVFTLSLLSCNPVKSNDAFVFTLINGLTTTATNSFLIGSSSKINVTSASVVLYFGTPQLFGFSLVKQPTANV VLSFTNAKLDAIGNLTFTSGNYNFPQLITLDSNTEIMETSILYVNVASADPEFNGISGQIPIYHRNVVITYTGSSFIFKE DNVAPTLTPTLGFPITSCSVLPALPNGLTLNTSTCVISGTPTDPNPLPGSTYTITATDGPNTDTENITISVEPTIYKVFV TASTFNGNLQGAEANGPAGADVKCNADANKPSTGTYKAMVVDGTNRSACSSPNCSGGAGENLFWVFQENSIYVRANDSAS LFTPSTAGIIPAPSTILNHNFDSGTTKYFWTGFAMTAYWQEATDEPTNSCVDWTDGSVTAVTTDGGRVGASDSRTYSAFR SGSGRSCSDTYHLLCVEQ
Sequences:
>Translated_418_residues MCWNRLFSIVFTLSLLSCNPVKSNDAFVFTLINGLTTTATNSFLIGSSSKINVTSASVVLYFGTPQLFGFSLVKQPTANV VLSFTNAKLDAIGNLTFTSGNYNFPQLITLDSNTEIMETSILYVNVASADPEFNGISGQIPIYHRNVVITYTGSSFIFKE DNVAPTLTPTLGFPITSCSVLPALPNGLTLNTSTCVISGTPTDPNPLPGSTYTITATDGPNTDTENITISVEPTIYKVFV TASTFNGNLQGAEANGPAGADVKCNADANKPSTGTYKAMVVDGTNRSACSSPNCSGGAGENLFWVFQENSIYVRANDSAS LFTPSTAGIIPAPSTILNHNFDSGTTKYFWTGFAMTAYWQEATDEPTNSCVDWTDGSVTAVTTDGGRVGASDSRTYSAFR SGSGRSCSDTYHLLCVEQ >Mature_418_residues MCWNRLFSIVFTLSLLSCNPVKSNDAFVFTLINGLTTTATNSFLIGSSSKINVTSASVVLYFGTPQLFGFSLVKQPTANV VLSFTNAKLDAIGNLTFTSGNYNFPQLITLDSNTEIMETSILYVNVASADPEFNGISGQIPIYHRNVVITYTGSSFIFKE DNVAPTLTPTLGFPITSCSVLPALPNGLTLNTSTCVISGTPTDPNPLPGSTYTITATDGPNTDTENITISVEPTIYKVFV TASTFNGNLQGAEANGPAGADVKCNADANKPSTGTYKAMVVDGTNRSACSSPNCSGGAGENLFWVFQENSIYVRANDSAS LFTPSTAGIIPAPSTILNHNFDSGTTKYFWTGFAMTAYWQEATDEPTNSCVDWTDGSVTAVTTDGGRVGASDSRTYSAFR SGSGRSCSDTYHLLCVEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44327; Mature: 44327
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCWNRLFSIVFTLSLLSCNPVKSNDAFVFTLINGLTTTATNSFLIGSSSKINVTSASVVL CCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEECCCCEEEECCCCEEEEEEEEEEE YFGTPQLFGFSLVKQPTANVVLSFTNAKLDAIGNLTFTSGNYNFPQLITLDSNTEIMETS EECCCHHCCEEECCCCCCEEEEEEECCCEEEEEEEEEECCCCCCCEEEEECCCCEEEEEE ILYVNVASADPEFNGISGQIPIYHRNVVITYTGSSFIFKEDNVAPTLTPTLGFPITSCSV EEEEEEECCCCCCCCCCCEEEEEECCEEEEEECCEEEEECCCCCCEECCCCCCCCCCCEE LPALPNGLTLNTSTCVISGTPTDPNPLPGSTYTITATDGPNTDTENITISVEPTIYKVFV ECCCCCCEEEECCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCEEEEEEE TASTFNGNLQGAEANGPAGADVKCNADANKPSTGTYKAMVVDGTNRSACSSPNCSGGAGE EEEECCCCEECCCCCCCCCCCEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC NLFWVFQENSIYVRANDSASLFTPSTAGIIPAPSTILNHNFDSGTTKYFWTGFAMTAYWQ CEEEEEECCEEEEEECCCCEEECCCCCCCCCCCHHHHCCCCCCCCEEEEEEEEEEEEEEH EATDEPTNSCVDWTDGSVTAVTTDGGRVGASDSRTYSAFRSGSGRSCSDTYHLLCVEQ HCCCCCCCCEEECCCCCEEEEEECCCEECCCCCCCHHHHHCCCCCCCCCEEEEEEEEC >Mature Secondary Structure MCWNRLFSIVFTLSLLSCNPVKSNDAFVFTLINGLTTTATNSFLIGSSSKINVTSASVVL CCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEECCCCEEEECCCCEEEEEEEEEEE YFGTPQLFGFSLVKQPTANVVLSFTNAKLDAIGNLTFTSGNYNFPQLITLDSNTEIMETS EECCCHHCCEEECCCCCCEEEEEEECCCEEEEEEEEEECCCCCCCEEEEECCCCEEEEEE ILYVNVASADPEFNGISGQIPIYHRNVVITYTGSSFIFKEDNVAPTLTPTLGFPITSCSV EEEEEEECCCCCCCCCCCEEEEEECCEEEEEECCEEEEECCCCCCEECCCCCCCCCCCEE LPALPNGLTLNTSTCVISGTPTDPNPLPGSTYTITATDGPNTDTENITISVEPTIYKVFV ECCCCCCEEEECCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCEEEEEEE TASTFNGNLQGAEANGPAGADVKCNADANKPSTGTYKAMVVDGTNRSACSSPNCSGGAGE EEEECCCCEECCCCCCCCCCCEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC NLFWVFQENSIYVRANDSASLFTPSTAGIIPAPSTILNHNFDSGTTKYFWTGFAMTAYWQ CEEEEEECCEEEEEECCCCEEECCCCCCCCCCCHHHHCCCCCCCCEEEEEEEEEEEEEEH EATDEPTNSCVDWTDGSVTAVTTDGGRVGASDSRTYSAFRSGSGRSCSDTYHLLCVEQ HCCCCCCCCEEECCCCCEEEEEECCCEECCCCCCCHHHHHCCCCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA