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The map label for this gene is dcrA [H]

Identifier: 183219536

GI number: 183219536

Start: 110888

End: 112450

Strand: Direct

Name: dcrA [H]

Synonym: LEPBI_I0109

Alternate gene names: 183219536

Gene position: 110888-112450 (Clockwise)

Preceding gene: 183219535

Following gene: 183219537

Centisome position: 3.08

GC content: 34.36

Gene sequence:

>1563_bases
ATGAGCATTGAAGAACTTTGGCAAAATGGAAAAGAAACTGTAAATCGAATTAGACTTGTGCTTTTCTTTATCTTTTTTGC
CGCGTTATTCGGTACAAAGGATAGTATGCCAGAGGCGATGTTTTATATCCATCTTTCTGGAACGATCATTATGGGAATTT
ATGCTGTTATTTGCCAACTTTGGTTGCACTACGGAAAACCACCAGAATGGTTTCATAAACTACTCATTGTTATGGATATA
GGAATCCACTTAATCAATACATCAATTGATTGTAGCATGGGCCCAATAGAAGCTAAGTCTGCCATCAATAATACAGCGGT
ATTACTCGTAGTTTATTTTTACTTAATTTACTCAGGATTTTTAGGAAATCCAAAATTTGTTTTATTCAATGGAGTGCTTG
CGGGGACAGGTGTGATCATTTCTTATTTTGTATCGGTACATTTTGGAGGACTCGTTCCTACTGAAGATCCGAATCTTTAT
ATTCAAACGGGTTATATTGGAACATCCGCCGAAATCATCAAAGGTGTATTTATCATTGTGAGTGGGGTATTGTTATCCAG
ACTCATTGCACTACTCATTCGCATAAGTGACAAAGGCATTGAAAAGGCAAAAGAATCTGAAAATTTATTGATTCAAAGTT
TAAAACAAAAAAAAATAATCCAAGATGCAGCTAAAAATTTAGAATCTTCCATAAAAAATTTTGCAAATTATATTTCACAC
ACATCTGAAAGATTAGAGTCACAAGCAGCTTCTTTAGAACAAGTCACTGCGATCAATACAGAATTGTTCTCGTCATTTGA
ATCGAATGCTTACATCATCAATGATCAAAATGTAAAAATTACTGATTTGTTTTCTGGATCAAATCATTTGAATCAAATGG
TGGCAACGATTAGTGAAATTAACCAAGAGTTAATTTCAATTGCCAACGAAAATAAAAAAGACACAACAGAGATTGCAGCT
GTTTCGAAGAAAACCAGTGAATATTTGGCTTCTATCAAATCTTCTTTTGATAAAGTAGACGAAATCAATCAAATTGTTGC
AGAAATTGGAGAAAAAACCAACTTACTGGCATTAAATGCTTCTATTGAAGCCGCTCGGGCAGGGGATGTGGGAAGAGGTT
TTGCCGTTGTTGCGAGTGAAGTGAGCAAATTAGCAGATTTTACTGCTAAAAATGCAAAGATAATATCTGAAGTTGTGAAT
CATTCTAGAAAATTCATTTATGATGCGGCAGAAGTTTCCATTCAAACTGGGAATTTGACTTCCAATCAGATTCATAAACT
GGAAATCACCACAGAGAAAGTAAGTTATATGCACCAGTTGTTTGAGAAACAAAAGAGTATTATTTTTGATACTATCAACC
AGTTAACAGAAATTAATGATCTTTCCTCTCAAATTTCCTTTAGTACAAAAGAACAAATTTCTGGCCAAACAGAAGTCAAT
AAAGGAATCATCGCATTAGAGAACGAAGTGAACCAAATTTCAAATGCTTCTAGAGATTTGGAGCAACATGTGGAAGAGAT
CCGTAACCAATCGCAAGAATTATTGACGTTAAGCGAATCATAA

Upstream 100 bases:

>100_bases
AAATTGAATTACAATCAAGTTTGTTAGGTTCATCAGATTTGTTAGAAGCAATGGAGAGTTTTGTAAGTCAAAGAAAACCA
AAGTTTACCGGTAATTAATC

Downstream 100 bases:

>100_bases
TCAATTTATAGTATTTCTGGAGATTTCTATGTTTCAAAAACCATTTCAAAATTTGATAAGGATCGGAATTTTACTTTTGA
TGGCATTCCTATTCAATTGT

Product: putative methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 520; Mature: 519

Protein sequence:

>520_residues
MSIEELWQNGKETVNRIRLVLFFIFFAALFGTKDSMPEAMFYIHLSGTIIMGIYAVICQLWLHYGKPPEWFHKLLIVMDI
GIHLINTSIDCSMGPIEAKSAINNTAVLLVVYFYLIYSGFLGNPKFVLFNGVLAGTGVIISYFVSVHFGGLVPTEDPNLY
IQTGYIGTSAEIIKGVFIIVSGVLLSRLIALLIRISDKGIEKAKESENLLIQSLKQKKIIQDAAKNLESSIKNFANYISH
TSERLESQAASLEQVTAINTELFSSFESNAYIINDQNVKITDLFSGSNHLNQMVATISEINQELISIANENKKDTTEIAA
VSKKTSEYLASIKSSFDKVDEINQIVAEIGEKTNLLALNASIEAARAGDVGRGFAVVASEVSKLADFTAKNAKIISEVVN
HSRKFIYDAAEVSIQTGNLTSNQIHKLEITTEKVSYMHQLFEKQKSIIFDTINQLTEINDLSSQISFSTKEQISGQTEVN
KGIIALENEVNQISNASRDLEQHVEEIRNQSQELLTLSES

Sequences:

>Translated_520_residues
MSIEELWQNGKETVNRIRLVLFFIFFAALFGTKDSMPEAMFYIHLSGTIIMGIYAVICQLWLHYGKPPEWFHKLLIVMDI
GIHLINTSIDCSMGPIEAKSAINNTAVLLVVYFYLIYSGFLGNPKFVLFNGVLAGTGVIISYFVSVHFGGLVPTEDPNLY
IQTGYIGTSAEIIKGVFIIVSGVLLSRLIALLIRISDKGIEKAKESENLLIQSLKQKKIIQDAAKNLESSIKNFANYISH
TSERLESQAASLEQVTAINTELFSSFESNAYIINDQNVKITDLFSGSNHLNQMVATISEINQELISIANENKKDTTEIAA
VSKKTSEYLASIKSSFDKVDEINQIVAEIGEKTNLLALNASIEAARAGDVGRGFAVVASEVSKLADFTAKNAKIISEVVN
HSRKFIYDAAEVSIQTGNLTSNQIHKLEITTEKVSYMHQLFEKQKSIIFDTINQLTEINDLSSQISFSTKEQISGQTEVN
KGIIALENEVNQISNASRDLEQHVEEIRNQSQELLTLSES
>Mature_519_residues
SIEELWQNGKETVNRIRLVLFFIFFAALFGTKDSMPEAMFYIHLSGTIIMGIYAVICQLWLHYGKPPEWFHKLLIVMDIG
IHLINTSIDCSMGPIEAKSAINNTAVLLVVYFYLIYSGFLGNPKFVLFNGVLAGTGVIISYFVSVHFGGLVPTEDPNLYI
QTGYIGTSAEIIKGVFIIVSGVLLSRLIALLIRISDKGIEKAKESENLLIQSLKQKKIIQDAAKNLESSIKNFANYISHT
SERLESQAASLEQVTAINTELFSSFESNAYIINDQNVKITDLFSGSNHLNQMVATISEINQELISIANENKKDTTEIAAV
SKKTSEYLASIKSSFDKVDEINQIVAEIGEKTNLLALNASIEAARAGDVGRGFAVVASEVSKLADFTAKNAKIISEVVNH
SRKFIYDAAEVSIQTGNLTSNQIHKLEITTEKVSYMHQLFEKQKSIIFDTINQLTEINDLSSQISFSTKEQISGQTEVNK
GIIALENEVNQISNASRDLEQHVEEIRNQSQELLTLSES

Specific function: Signal Transducer For Aerotaxis. The Aerotactic Response Is The Accumulation Of Cells Around Air Bubbles. The Nature Of The Sensory Stimulus Detected By This Protein Is The Proton Motive Force Or Cellular Redox State. It Uses A FAD Prosthetic Group As A R

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1789453, Length=264, Percent_Identity=28.4090909090909, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1787690, Length=256, Percent_Identity=31.25, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1788194, Length=274, Percent_Identity=25.5474452554745, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1788195, Length=287, Percent_Identity=24.390243902439, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI2367378, Length=273, Percent_Identity=24.1758241758242, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 57658; Mature: 57526

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIEELWQNGKETVNRIRLVLFFIFFAALFGTKDSMPEAMFYIHLSGTIIMGIYAVICQL
CCHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHH
WLHYGKPPEWFHKLLIVMDIGIHLINTSIDCSMGPIEAKSAINNTAVLLVVYFYLIYSGF
HHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCC
LGNPKFVLFNGVLAGTGVIISYFVSVHFGGLVPTEDPNLYIQTGYIGTSAEIIKGVFIIV
CCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHH
SGVLLSRLIALLIRISDKGIEKAKESENLLIQSLKQKKIIQDAAKNLESSIKNFANYISH
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSERLESQAASLEQVTAINTELFSSFESNAYIINDQNVKITDLFSGSNHLNQMVATISEI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHH
NQELISIANENKKDTTEIAAVSKKTSEYLASIKSSFDKVDEINQIVAEIGEKTNLLALNA
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
SIEAARAGDVGRGFAVVASEVSKLADFTAKNAKIISEVVNHSRKFIYDAAEVSIQTGNLT
CCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHEEEEECCCC
SNQIHKLEITTEKVSYMHQLFEKQKSIIFDTINQLTEINDLSSQISFSTKEQISGQTEVN
CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHC
KGIIALENEVNQISNASRDLEQHVEEIRNQSQELLTLSES
CCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCC
>Mature Secondary Structure 
SIEELWQNGKETVNRIRLVLFFIFFAALFGTKDSMPEAMFYIHLSGTIIMGIYAVICQL
CHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHH
WLHYGKPPEWFHKLLIVMDIGIHLINTSIDCSMGPIEAKSAINNTAVLLVVYFYLIYSGF
HHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCC
LGNPKFVLFNGVLAGTGVIISYFVSVHFGGLVPTEDPNLYIQTGYIGTSAEIIKGVFIIV
CCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHH
SGVLLSRLIALLIRISDKGIEKAKESENLLIQSLKQKKIIQDAAKNLESSIKNFANYISH
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSERLESQAASLEQVTAINTELFSSFESNAYIINDQNVKITDLFSGSNHLNQMVATISEI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHH
NQELISIANENKKDTTEIAAVSKKTSEYLASIKSSFDKVDEINQIVAEIGEKTNLLALNA
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
SIEAARAGDVGRGFAVVASEVSKLADFTAKNAKIISEVVNHSRKFIYDAAEVSIQTGNLT
CCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHEEEEECCCC
SNQIHKLEITTEKVSYMHQLFEKQKSIIFDTINQLTEINDLSSQISFSTKEQISGQTEVN
CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHC
KGIIALENEVNQISNASRDLEQHVEEIRNQSQELLTLSES
CCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]