| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183219537
Identifier: 183219537
GI number: 183219537
Start: 112479
End: 113708
Strand: Direct
Name: 183219537
Synonym: LEPBI_I0110
Alternate gene names: NA
Gene position: 112479-113708 (Clockwise)
Preceding gene: 183219536
Following gene: 183219543
Centisome position: 3.12
GC content: 34.31
Gene sequence:
>1230_bases ATGTTTCAAAAACCATTTCAAAATTTGATAAGGATCGGAATTTTACTTTTGATGGCATTCCTATTCAATTGTTCCAACGA TAATTTATTACCTGATCAAGTCATTGACCAACATGGAAAAACCATTCAAATGATTCCTGCACCGGATGTGAGTAAAACAA TACAAAAAGAATTTACTTCTCCTGTTTCCTTATTGAAGCCAGATGGAACTTTGAATGTTACTGGTTGGTCAAGGTACCCA AACTTTCAAATCGATGAGTCGCTCATGAAAGTGGAACCAAAACGATACAAACGATGGGAACATTATACTTTCTATAATGA GGATTTTGGCGGTGCCATAACTATCACTGACATTGGAAACTTGGCAATGGGCAGTATCGAATTATTAGAATTCAAATCAG GAAAAACAATTTTTTCCAAAACGGAACTTGTGCGACCTGGTTCTATATTTTTTCCAACCAATACTACTGATCCAATTGAA TTTACAAAAGGTAATCAATTCATCCGCATTCAAAAACAAAAGGGCAAACGAATCATTTCGTATTCGATTCAAGGCGATTC CGCAAATGATAAAATCGTTGGAAATTTCGAATTCATCGAAAAAGCAGATGAAGCACTCGCAATCATCACACCTTTTTCTG AATCTAATTTTTTCTATGAATACAAAATGCCAAGTTTGATTTGCAAAGGAACAATCGTTTACCAACAATCCATTTACGAT TTTAAAGAAAATAGTTTTGCTGTATTGGATTGGGGAAGGGGGATTTGGCCAGAAAAAAATAAATGGCTTTGGGCGGCAGG TGCTGGAATGGTTGGGGGCGAACTCCTCAGTTTAAACTTAGGGTATGGATTTGGTGACCAATCAAATGCGACTGAAAATG GTATCGTATACAAAGGAAAAGTTCATAAGCTTGATAAAGTGATTTGGAAGTATGATGTCAAAGATTACAAAAAACCTTGG CAATTTGTGAGTAACGATGGTCGTTTGGAATTAAATTTTACTCCTGTTTATCTTTTATATTCTGACATTGATTTAATGGG TATGATCGGTTTTTTAAAACAATTGGTTCAGAATTTTTCTATATCTGAAATTTTTGAATTATTAAAAACAGAAGCCTATT TGAATAAAGCATTCGGTACATACAGTGGTTATGTGATATTAGACAATGGCACTAAATTAGAAGTCAAAAATCTATTTGGA TTTGCAGAACAAATGTACCAACAGTGGTAA
Upstream 100 bases:
>100_bases AGAGATTTGGAGCAACATGTGGAAGAGATCCGTAACCAATCGCAAGAATTATTGACGTTAAGCGAATCATAATCAATTTA TAGTATTTCTGGAGATTTCT
Downstream 100 bases:
>100_bases ATCACATCGTATAATTTCGTAATGTTTTTAATCTGATTGTGGTCATCATCACAATCAGAGTTAAAATTATACCTGCGCTG ATTACGGCTGTCGCAATCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MFQKPFQNLIRIGILLLMAFLFNCSNDNLLPDQVIDQHGKTIQMIPAPDVSKTIQKEFTSPVSLLKPDGTLNVTGWSRYP NFQIDESLMKVEPKRYKRWEHYTFYNEDFGGAITITDIGNLAMGSIELLEFKSGKTIFSKTELVRPGSIFFPTNTTDPIE FTKGNQFIRIQKQKGKRIISYSIQGDSANDKIVGNFEFIEKADEALAIITPFSESNFFYEYKMPSLICKGTIVYQQSIYD FKENSFAVLDWGRGIWPEKNKWLWAAGAGMVGGELLSLNLGYGFGDQSNATENGIVYKGKVHKLDKVIWKYDVKDYKKPW QFVSNDGRLELNFTPVYLLYSDIDLMGMIGFLKQLVQNFSISEIFELLKTEAYLNKAFGTYSGYVILDNGTKLEVKNLFG FAEQMYQQW
Sequences:
>Translated_409_residues MFQKPFQNLIRIGILLLMAFLFNCSNDNLLPDQVIDQHGKTIQMIPAPDVSKTIQKEFTSPVSLLKPDGTLNVTGWSRYP NFQIDESLMKVEPKRYKRWEHYTFYNEDFGGAITITDIGNLAMGSIELLEFKSGKTIFSKTELVRPGSIFFPTNTTDPIE FTKGNQFIRIQKQKGKRIISYSIQGDSANDKIVGNFEFIEKADEALAIITPFSESNFFYEYKMPSLICKGTIVYQQSIYD FKENSFAVLDWGRGIWPEKNKWLWAAGAGMVGGELLSLNLGYGFGDQSNATENGIVYKGKVHKLDKVIWKYDVKDYKKPW QFVSNDGRLELNFTPVYLLYSDIDLMGMIGFLKQLVQNFSISEIFELLKTEAYLNKAFGTYSGYVILDNGTKLEVKNLFG FAEQMYQQW >Mature_409_residues MFQKPFQNLIRIGILLLMAFLFNCSNDNLLPDQVIDQHGKTIQMIPAPDVSKTIQKEFTSPVSLLKPDGTLNVTGWSRYP NFQIDESLMKVEPKRYKRWEHYTFYNEDFGGAITITDIGNLAMGSIELLEFKSGKTIFSKTELVRPGSIFFPTNTTDPIE FTKGNQFIRIQKQKGKRIISYSIQGDSANDKIVGNFEFIEKADEALAIITPFSESNFFYEYKMPSLICKGTIVYQQSIYD FKENSFAVLDWGRGIWPEKNKWLWAAGAGMVGGELLSLNLGYGFGDQSNATENGIVYKGKVHKLDKVIWKYDVKDYKKPW QFVSNDGRLELNFTPVYLLYSDIDLMGMIGFLKQLVQNFSISEIFELLKTEAYLNKAFGTYSGYVILDNGTKLEVKNLFG FAEQMYQQW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46868; Mature: 46868
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQKPFQNLIRIGILLLMAFLFNCSNDNLLPDQVIDQHGKTIQMIPAPDVSKTIQKEFTS CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHCC PVSLLKPDGTLNVTGWSRYPNFQIDESLMKVEPKRYKRWEHYTFYNEDFGGAITITDIGN CCEEECCCCEEEEEECCCCCCCCCCCHHHHCCHHHHHCCCCEEEECCCCCCEEEEEECCC LAMGSIELLEFKSGKTIFSKTELVRPGSIFFPTNTTDPIEFTKGNQFIRIQKQKGKRIIS CCCCCEEEEEECCCCEEECHHHEECCCCEEECCCCCCCEEECCCCEEEEEECCCCCEEEE YSIQGDSANDKIVGNFEFIEKADEALAIITPFSESNFFYEYKMPSLICKGTIVYQQSIYD EEECCCCCCCCEEECHHHHHCCCCEEEEEEECCCCCEEEEECCCCEEECEEEEEEHHHHH FKENSFAVLDWGRGIWPEKNKWLWAAGAGMVGGELLSLNLGYGFGDQSNATENGIVYKGK CCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECC VHKLDKVIWKYDVKDYKKPWQFVSNDGRLELNFTPVYLLYSDIDLMGMIGFLKQLVQNFS HHHHHHHHHHHCHHHHHCCHHHHCCCCEEEEEEEEEEEEEECCHHHHHHHHHHHHHHCCC ISEIFELLKTEAYLNKAFGTYSGYVILDNGTKLEVKNLFGFAEQMYQQW HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEHHHHHHHHHHHHHCC >Mature Secondary Structure MFQKPFQNLIRIGILLLMAFLFNCSNDNLLPDQVIDQHGKTIQMIPAPDVSKTIQKEFTS CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHCC PVSLLKPDGTLNVTGWSRYPNFQIDESLMKVEPKRYKRWEHYTFYNEDFGGAITITDIGN CCEEECCCCEEEEEECCCCCCCCCCCHHHHCCHHHHHCCCCEEEECCCCCCEEEEEECCC LAMGSIELLEFKSGKTIFSKTELVRPGSIFFPTNTTDPIEFTKGNQFIRIQKQKGKRIIS CCCCCEEEEEECCCCEEECHHHEECCCCEEECCCCCCCEEECCCCEEEEEECCCCCEEEE YSIQGDSANDKIVGNFEFIEKADEALAIITPFSESNFFYEYKMPSLICKGTIVYQQSIYD EEECCCCCCCCEEECHHHHHCCCCEEEEEEECCCCCEEEEECCCCEEECEEEEEEHHHHH FKENSFAVLDWGRGIWPEKNKWLWAAGAGMVGGELLSLNLGYGFGDQSNATENGIVYKGK CCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECC VHKLDKVIWKYDVKDYKKPWQFVSNDGRLELNFTPVYLLYSDIDLMGMIGFLKQLVQNFS HHHHHHHHHHHCHHHHHCCHHHHCCCCEEEEEEEEEEEEEECCHHHHHHHHHHHHHHCCC ISEIFELLKTEAYLNKAFGTYSGYVILDNGTKLEVKNLFGFAEQMYQQW HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA