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The map label for this gene is ybjS [C]

Identifier: 183219532

GI number: 183219532

Start: 106345

End: 107313

Strand: Direct

Name: ybjS [C]

Synonym: LEPBI_I0105

Alternate gene names: 183219532

Gene position: 106345-107313 (Clockwise)

Preceding gene: 183219531

Following gene: 183219533

Centisome position: 2.95

GC content: 34.26

Gene sequence:

>969_bases
ATGAAATATACTGGAATCACTTTGATCACTGGAGCCAATGGATTCATTGGATTTGAACTTTTGAAAGAGCTCTCAAAAGA
TTCAAATCTAAAGATTCGTGTCACAGATATTCGAGATGATAAAATCAATTTATTAAAGAAACCTAATATTGAATTGATTA
AGTCGGATATTCGAAATCAAAAAGAACTTAGCACCTTATTAAATGGTGTTGATCGTATTTTTCATGTTGCAGGAATTTGT
AATCTGAGTACAGACTTCGATCGTCTAAAGCCGATCAATGTTGATGCTGTTGATAAGTTAACCAATATTGCAGTTCAAAA
TAGTGTAAAAGCATACGTTCATTTTAGTTCCTCAAGTGTTTATGGAACTTATAACGGAAATCCATTTAAAGAAACGGATG
TTTGTAACCCGAAAGATTCGTACGCTAAAAGTAAATATGCAGGCGAACAGATTGTAACAGAAAGAATCAAAAATGGTTTA
AAGGCAATCATCCTTCGCCCGTGCACTGTCTACGGTCCAGGTTGTAATGATGGTGCTGGAAAGGTATTTTCGAGACCAGG
GCAGATCGCCGGAATTCCTGGTGATGGAAAAAAGAAATTGGCAAATGTTCGAGTAGAAGATGTAGCAAGGGCTGCCATTT
ATTTATCTGAGAAGGAAAACACTTTTGGTCAAATCTACAATATAGCAGATGATGACCATCCGAGTTTAGAAGAAGCACTG
GAATTGGCTTCCAAAACATTTGGATCAAAGATCAACAAAATTCACATTCCATTGTTGTTATTGAAAATCATATCAAAACT
AGAATCTCCAATTGCAAAACTGCAAGGTAGAATTCCCGATCTCGAATATGAAGCAATCAAATATCTATATGATGATTATT
ATATGGATAATGAGAAACTAAAATCAACTGGTTACAAGTTACTGTATCCAAATTTTGTTTCTTCAATGGAATCAATGAAA
TTAATTTAA

Upstream 100 bases:

>100_bases
GTGCGTGAAGTAAAATCGTTATTAGCTGGCGGTGGAAGTTCGGAAGTGATGTTAAATAATGTCGCTAGAGAAATCCTTCG
GCCTTCCTACCAATATTAAA

Downstream 100 bases:

>100_bases
AGAGGATAAAATGAGTAAGGTAATTGTAATTAGCGGAATTGCCCAAGGTATGGGTCGGGAAGTGTCATTGATGTTGGCAT
CACAAGGATATACTATTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MKYTGITLITGANGFIGFELLKELSKDSNLKIRVTDIRDDKINLLKKPNIELIKSDIRNQKELSTLLNGVDRIFHVAGIC
NLSTDFDRLKPINVDAVDKLTNIAVQNSVKAYVHFSSSSVYGTYNGNPFKETDVCNPKDSYAKSKYAGEQIVTERIKNGL
KAIILRPCTVYGPGCNDGAGKVFSRPGQIAGIPGDGKKKLANVRVEDVARAAIYLSEKENTFGQIYNIADDDHPSLEEAL
ELASKTFGSKINKIHIPLLLLKIISKLESPIAKLQGRIPDLEYEAIKYLYDDYYMDNEKLKSTGYKLLYPNFVSSMESMK
LI

Sequences:

>Translated_322_residues
MKYTGITLITGANGFIGFELLKELSKDSNLKIRVTDIRDDKINLLKKPNIELIKSDIRNQKELSTLLNGVDRIFHVAGIC
NLSTDFDRLKPINVDAVDKLTNIAVQNSVKAYVHFSSSSVYGTYNGNPFKETDVCNPKDSYAKSKYAGEQIVTERIKNGL
KAIILRPCTVYGPGCNDGAGKVFSRPGQIAGIPGDGKKKLANVRVEDVARAAIYLSEKENTFGQIYNIADDDHPSLEEAL
ELASKTFGSKINKIHIPLLLLKIISKLESPIAKLQGRIPDLEYEAIKYLYDDYYMDNEKLKSTGYKLLYPNFVSSMESMK
LI
>Mature_322_residues
MKYTGITLITGANGFIGFELLKELSKDSNLKIRVTDIRDDKINLLKKPNIELIKSDIRNQKELSTLLNGVDRIFHVAGIC
NLSTDFDRLKPINVDAVDKLTNIAVQNSVKAYVHFSSSSVYGTYNGNPFKETDVCNPKDSYAKSKYAGEQIVTERIKNGL
KAIILRPCTVYGPGCNDGAGKVFSRPGQIAGIPGDGKKKLANVRVEDVARAAIYLSEKENTFGQIYNIADDDHPSLEEAL
ELASKTFGSKINKIHIPLLLLKIISKLESPIAKLQGRIPDLEYEAIKYLYDDYYMDNEKLKSTGYKLLYPNFVSSMESMK
LI

Specific function: Putative nucleotide sugar epimerase/dehydrogenase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI239745448, Length=279, Percent_Identity=25.089605734767, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI310132178, Length=279, Percent_Identity=25.089605734767, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI310113012, Length=279, Percent_Identity=25.089605734767, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI4504507, Length=303, Percent_Identity=28.3828382838284, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI87081792, Length=308, Percent_Identity=22.0779220779221, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 35898; Mature: 35898

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYTGITLITGANGFIGFELLKELSKDSNLKIRVTDIRDDKINLLKKPNIELIKSDIRNQ
CCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHCCCCHHHHHHHHCCH
KELSTLLNGVDRIFHVAGICNLSTDFDRLKPINVDAVDKLTNIAVQNSVKAYVHFSSSSV
HHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHCCEEEEEEECCCEE
YGTYNGNPFKETDVCNPKDSYAKSKYAGEQIVTERIKNGLKAIILRPCTVYGPGCNDGAG
EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHEEEECCCEEECCCCCCCCC
KVFSRPGQIAGIPGDGKKKLANVRVEDVARAAIYLSEKENTFGQIYNIADDDHPSLEEAL
HHHCCCCCEECCCCCCHHHHHCCHHHHHHHHHHEEECCCCCCHHEEECCCCCCCCHHHHH
ELASKTFGSKINKIHIPLLLLKIISKLESPIAKLQGRIPDLEYEAIKYLYDDYYMDNEKL
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHH
KSTGYKLLYPNFVSSMESMKLI
HHCCCEEECCHHHHHHHHHCCC
>Mature Secondary Structure
MKYTGITLITGANGFIGFELLKELSKDSNLKIRVTDIRDDKINLLKKPNIELIKSDIRNQ
CCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHCCCCHHHHHHHHCCH
KELSTLLNGVDRIFHVAGICNLSTDFDRLKPINVDAVDKLTNIAVQNSVKAYVHFSSSSV
HHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHCCEEEEEEECCCEE
YGTYNGNPFKETDVCNPKDSYAKSKYAGEQIVTERIKNGLKAIILRPCTVYGPGCNDGAG
EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHEEEECCCEEECCCCCCCCC
KVFSRPGQIAGIPGDGKKKLANVRVEDVARAAIYLSEKENTFGQIYNIADDDHPSLEEAL
HHHCCCCCEECCCCCCHHHHHCCHHHHHHHHHHEEECCCCCCHHEEECCCCCCCCHHHHH
ELASKTFGSKINKIHIPLLLLKIISKLESPIAKLQGRIPDLEYEAIKYLYDDYYMDNEKL
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHH
KSTGYKLLYPNFVSSMESMKLI
HHCCCEEECCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]