Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183219481
Identifier: 183219481
GI number: 183219481
Start: 53386
End: 54735
Strand: Reverse
Name: 183219481
Synonym: LEPBI_I0054
Alternate gene names: NA
Gene position: 54735-53386 (Counterclockwise)
Preceding gene: 183219483
Following gene: 183219480
Centisome position: 1.52
GC content: 34.74
Gene sequence:
>1350_bases TTGAAAAATCAGCTATTAACAGGTCCCTATTATTTTGGAATGAAAGATTTGGAAGTTTTCAAAAAACATTTCATCCAAGA GAATAAAGGAAAACCTCTCTTTCTCATTCGTTTTGAAAATATTGCAGGCATTGAACTCACCGAGTTTTTAGATTTATTAC GAACAGAATTTTACTCCTGTTTGGATTTGGAAGATATCTCTTTTGGATTTCATTATTTGGAAAAACAAAATATTTTGTTA ATGGGGATCTCTCCTTTATTTGAATGGGATATTGAAAAATTTCCAAATATTGAAAATTCCGTTGGAAAATTCCAACAACA ATGTTTACAAAATAAAATCGTTTCCTTTCATTTTGGAGTCTCTCGAACCCAATCTAATTTTATCTCCGATAACGAAGAAA TTTTTGTCGAACTGTTTCGATCATCCGAAAAAAACCTGAACGACAATTTGGTTCGATGGAGTTGGACCTATTACAACAAA GCCAATACATATATCTCAGGATCAGTTCATGAAGCGATGATCCAACCCACAGTCATTTTTAATCCCAAAGACAAAACTTA TTCTGTGAAAGGGGGAGAAGTGTTTTTAGGCGGGGGTGCCTATATTGGATACAAAGATCTCATCAATGATATTCCTTCCG ACCAGGATCTCAATCGTATTGAACTTTTGATTTTAGAGAAACTGATCATTGCTTGCGAAGGTGCACCTGGGTTATTAAAA TTTAATATTTCTCCCCAATCCTTGATTGATACATTTTCACATAATGAACGTGTGGATCGATTGAAAAAACTCATCGAAAG CAAGGATCTATCACCAGAAAACGTTCGTTTTGAGCTCGTTGAAAAACCATACGACGAATCAAAATACCATTTAAAAGACG TATGCCACGCTTTTTATTCGCACGGAATGAGTTTTGCCGCTGATGACTTTGGAGTCAAAAGTCAGTCTCATCAAATAGTA CTCGATCTCGGCATTATGATCAAAGAATTCAAATTGGATCCGATTAGTTTTAAATTCAAAATTGAAGAGGACCAAATTAA ATTTTTGGACAATTTAGCGTTCATTGACTATTGCAAACGATTGGCAGACAACCGAGAAGCAGTGATCACTGCAGAAGCGG TAGAAGATTTTGATACATTAAACTTCCTGATGGAACATCAAATTTATCAATTCCAAGCCAATATCTTATTTGGAAAAATG ACAGTGACAGATTACAAACGGGATTTTGATTTACTCCATTCCATTCACGAGGATGTTGTGAAAGAAGTATTAACAGACAA AATTTTATCGGAAAAACAAAAGAAAGTCGGGAACTTGTTTTTAGTCGCATCCGAAGAAGGACTCATTTAA
Upstream 100 bases:
>100_bases AAAACTATACATAAGTGACTATCCTTGTTGCCTTTTCTATTGAATTCTCATAAAATTACAGGACGTCGTTAAAGAATCAA ATCATATACGAAGGCACCAT
Downstream 100 bases:
>100_bases AGTTTTTATGCATTTTATCATGACCATCGAAAATGATCCAAATTCAGCTCAGGATTTGGAAAATATCTTTTTAGGATTAA GACAAAGAGTTGTCATCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues MKNQLLTGPYYFGMKDLEVFKKHFIQENKGKPLFLIRFENIAGIELTEFLDLLRTEFYSCLDLEDISFGFHYLEKQNILL MGISPLFEWDIEKFPNIENSVGKFQQQCLQNKIVSFHFGVSRTQSNFISDNEEIFVELFRSSEKNLNDNLVRWSWTYYNK ANTYISGSVHEAMIQPTVIFNPKDKTYSVKGGEVFLGGGAYIGYKDLINDIPSDQDLNRIELLILEKLIIACEGAPGLLK FNISPQSLIDTFSHNERVDRLKKLIESKDLSPENVRFELVEKPYDESKYHLKDVCHAFYSHGMSFAADDFGVKSQSHQIV LDLGIMIKEFKLDPISFKFKIEEDQIKFLDNLAFIDYCKRLADNREAVITAEAVEDFDTLNFLMEHQIYQFQANILFGKM TVTDYKRDFDLLHSIHEDVVKEVLTDKILSEKQKKVGNLFLVASEEGLI
Sequences:
>Translated_449_residues MKNQLLTGPYYFGMKDLEVFKKHFIQENKGKPLFLIRFENIAGIELTEFLDLLRTEFYSCLDLEDISFGFHYLEKQNILL MGISPLFEWDIEKFPNIENSVGKFQQQCLQNKIVSFHFGVSRTQSNFISDNEEIFVELFRSSEKNLNDNLVRWSWTYYNK ANTYISGSVHEAMIQPTVIFNPKDKTYSVKGGEVFLGGGAYIGYKDLINDIPSDQDLNRIELLILEKLIIACEGAPGLLK FNISPQSLIDTFSHNERVDRLKKLIESKDLSPENVRFELVEKPYDESKYHLKDVCHAFYSHGMSFAADDFGVKSQSHQIV LDLGIMIKEFKLDPISFKFKIEEDQIKFLDNLAFIDYCKRLADNREAVITAEAVEDFDTLNFLMEHQIYQFQANILFGKM TVTDYKRDFDLLHSIHEDVVKEVLTDKILSEKQKKVGNLFLVASEEGLI >Mature_449_residues MKNQLLTGPYYFGMKDLEVFKKHFIQENKGKPLFLIRFENIAGIELTEFLDLLRTEFYSCLDLEDISFGFHYLEKQNILL MGISPLFEWDIEKFPNIENSVGKFQQQCLQNKIVSFHFGVSRTQSNFISDNEEIFVELFRSSEKNLNDNLVRWSWTYYNK ANTYISGSVHEAMIQPTVIFNPKDKTYSVKGGEVFLGGGAYIGYKDLINDIPSDQDLNRIELLILEKLIIACEGAPGLLK FNISPQSLIDTFSHNERVDRLKKLIESKDLSPENVRFELVEKPYDESKYHLKDVCHAFYSHGMSFAADDFGVKSQSHQIV LDLGIMIKEFKLDPISFKFKIEEDQIKFLDNLAFIDYCKRLADNREAVITAEAVEDFDTLNFLMEHQIYQFQANILFGKM TVTDYKRDFDLLHSIHEDVVKEVLTDKILSEKQKKVGNLFLVASEEGLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52083; Mature: 52083
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS50883 EAL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNQLLTGPYYFGMKDLEVFKKHFIQENKGKPLFLIRFENIAGIELTEFLDLLRTEFYSC CCCCEECCCHHCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH LDLEDISFGFHYLEKQNILLMGISPLFEWDIEKFPNIENSVGKFQQQCLQNKIVSFHFGV CCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEECCC SRTQSNFISDNEEIFVELFRSSEKNLNDNLVRWSWTYYNKANTYISGSVHEAMIQPTVIF CHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCEECCCHHHHHCCCEEEE NPKDKTYSVKGGEVFLGGGAYIGYKDLINDIPSDQDLNRIELLILEKLIIACEGAPGLLK CCCCCEEEECCCEEEECCCCEECHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEE FNISPQSLIDTFSHNERVDRLKKLIESKDLSPENVRFELVEKPYDESKYHLKDVCHAFYS ECCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH HGMSFAADDFGVKSQSHQIVLDLGIMIKEFKLDPISFKFKIEEDQIKFLDNLAFIDYCKR CCCCCCCCCCCCCCCCCEEEEEECHHHHHEECCCEEEEEEECHHHHHHHHHHHHHHHHHH LADNREAVITAEAVEDFDTLNFLMEHQIYQFQANILFGKMTVTDYKRDFDLLHSIHEDVV HHCCCCEEEEHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHH KEVLTDKILSEKQKKVGNLFLVASEEGLI HHHHHHHHHHHHHHHCCCEEEEECCCCCC >Mature Secondary Structure MKNQLLTGPYYFGMKDLEVFKKHFIQENKGKPLFLIRFENIAGIELTEFLDLLRTEFYSC CCCCEECCCHHCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH LDLEDISFGFHYLEKQNILLMGISPLFEWDIEKFPNIENSVGKFQQQCLQNKIVSFHFGV CCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEECCC SRTQSNFISDNEEIFVELFRSSEKNLNDNLVRWSWTYYNKANTYISGSVHEAMIQPTVIF CHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCEECCCHHHHHCCCEEEE NPKDKTYSVKGGEVFLGGGAYIGYKDLINDIPSDQDLNRIELLILEKLIIACEGAPGLLK CCCCCEEEECCCEEEECCCCEECHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEE FNISPQSLIDTFSHNERVDRLKKLIESKDLSPENVRFELVEKPYDESKYHLKDVCHAFYS ECCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH HGMSFAADDFGVKSQSHQIVLDLGIMIKEFKLDPISFKFKIEEDQIKFLDNLAFIDYCKR CCCCCCCCCCCCCCCCCEEEEEECHHHHHEECCCEEEEEEECHHHHHHHHHHHHHHHHHH LADNREAVITAEAVEDFDTLNFLMEHQIYQFQANILFGKMTVTDYKRDFDLLHSIHEDVV HHCCCCEEEEHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHH KEVLTDKILSEKQKKVGNLFLVASEEGLI HHHHHHHHHHHHHHHCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA