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The map label for this gene is yebC [C]

Identifier: 183219483

GI number: 183219483

Start: 55184

End: 55927

Strand: Reverse

Name: yebC [C]

Synonym: LEPBI_I0056

Alternate gene names: 183219483

Gene position: 55927-55184 (Counterclockwise)

Preceding gene: 183219488

Following gene: 183219481

Centisome position: 1.55

GC content: 45.03

Gene sequence:

>744_bases
ATGTCAGGACACTCGAAATGGGCGACGATTCGAAGAAAAAAGGGAGCCATTGATGCCAAAAGAGGCGCCATCTTTACAAG
GATAGCCAAAGAAATTTCTGTGGCAGCCAAAGAAGGTGGAGGTGACCAAGAAGGGAACCCAAGACTTCGCTTAGCGGTGA
CAAAAGCCAAAGCCGCCAATATGCCAAAAGACAATATCGAACGTGCCATCAAAAAGGGAACGGGTGGTCTGGAAGGTATG
GTGTATGAAGAGTGTCTGTACGAATGTTATGCACCAGGTGGTGTAGCCATCATGGTAGACGTCCTCACCGATAAAAAATC
CCGTACAACTCCTGAAATCAAAAGTATTTTAACAAAACTTGGTGGTTCCCTTGCCAATGCGGGAGCTGTTTCACGTTTGT
TTGAACGCAAAGGCCAACTGACTCTAAAGGCGGATCAAATTTCGGAAGAGGCTTTGTTTGATTTAGCACTTGGGGCTGGA
GCAGAGGACATCCAAGTGAACGACGGAATGTATGTGGTCCTCACATCACCTTCAGAATATGAAGCAGTGCAATCGGCACT
CTCTTCCAAAGGTTTGAATATGGAAGAATCGGAAATCAAATACATTCCAATGACAACTGTGGAAGTGAATGAGAAAGAGA
CGGCCGAAAAAGTGATGAAACTCATTGAAAACTTAGAAGCCAATGATGATGTGCAAGGTGTGAGTTCCAACTTTGAGTTA
GGCGAAGGTGTTGAACTCGATTGA

Upstream 100 bases:

>100_bases
TACAGTACTTTGGAATTTTCTCTATGAGTCAAGAAACTAGGGCGACTTAAATCTGTTGAAAAATCTTTTGAATCCAAAAT
CCTAGCCATGGGAGACTACA

Downstream 100 bases:

>100_bases
TCGATTCATTTTGTAAATTCATAGCGAACTGACAGGGATTTATGTCTCCCTGTCAAAACGATCAAACTTAATACAATACG
TTTGGATTGAAACGTAAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MSGHSKWATIRRKKGAIDAKRGAIFTRIAKEISVAAKEGGGDQEGNPRLRLAVTKAKAANMPKDNIERAIKKGTGGLEGM
VYEECLYECYAPGGVAIMVDVLTDKKSRTTPEIKSILTKLGGSLANAGAVSRLFERKGQLTLKADQISEEALFDLALGAG
AEDIQVNDGMYVVLTSPSEYEAVQSALSSKGLNMEESEIKYIPMTTVEVNEKETAEKVMKLIENLEANDDVQGVSSNFEL
GEGVELD

Sequences:

>Translated_247_residues
MSGHSKWATIRRKKGAIDAKRGAIFTRIAKEISVAAKEGGGDQEGNPRLRLAVTKAKAANMPKDNIERAIKKGTGGLEGM
VYEECLYECYAPGGVAIMVDVLTDKKSRTTPEIKSILTKLGGSLANAGAVSRLFERKGQLTLKADQISEEALFDLALGAG
AEDIQVNDGMYVVLTSPSEYEAVQSALSSKGLNMEESEIKYIPMTTVEVNEKETAEKVMKLIENLEANDDVQGVSSNFEL
GEGVELD
>Mature_246_residues
SGHSKWATIRRKKGAIDAKRGAIFTRIAKEISVAAKEGGGDQEGNPRLRLAVTKAKAANMPKDNIERAIKKGTGGLEGMV
YEECLYECYAPGGVAIMVDVLTDKKSRTTPEIKSILTKLGGSLANAGAVSRLFERKGQLTLKADQISEEALFDLALGAGA
EDIQVNDGMYVVLTSPSEYEAVQSALSSKGLNMEESEIKYIPMTTVEVNEKETAEKVMKLIENLEANDDVQGVSSNFELG
EGVELD

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=248, Percent_Identity=29.0322580645161, Blast_Score=108, Evalue=4e-24,
Organism=Escherichia coli, GI1788171, Length=245, Percent_Identity=44.4897959183673, Blast_Score=203, Evalue=1e-53,
Organism=Escherichia coli, GI1788294, Length=235, Percent_Identity=32.3404255319149, Blast_Score=114, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI17556100, Length=244, Percent_Identity=24.1803278688525, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6321458, Length=263, Percent_Identity=32.6996197718631, Blast_Score=107, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24583305, Length=256, Percent_Identity=28.90625, Blast_Score=79, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y056_LEPBA (B0S959)

Other databases:

- EMBL:   CP000777
- RefSeq:   YP_001961181.1
- ProteinModelPortal:   B0S959
- SMR:   B0S959
- GeneID:   6390051
- GenomeReviews:   CP000777_GR
- KEGG:   lbf:LBF_0056
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- ProtClustDB:   PRK00110
- BioCyc:   LBIF355278:LBF_0056-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 26591; Mature: 26459

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGHSKWATIRRKKGAIDAKRGAIFTRIAKEISVAAKEGGGDQEGNPRLRLAVTKAKAAN
CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEHHHCC
MPKDNIERAIKKGTGGLEGMVYEECLYECYAPGGVAIMVDVLTDKKSRTTPEIKSILTKL
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEHHCCCCCCCHHHHHHHHHH
GGSLANAGAVSRLFERKGQLTLKADQISEEALFDLALGAGAEDIQVNDGMYVVLTSPSEY
CCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEECCCHH
EAVQSALSSKGLNMEESEIKYIPMTTVEVNEKETAEKVMKLIENLEANDDVQGVSSNFEL
HHHHHHHHHCCCCCCCCCEEEECEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GEGVELD
CCCCCCC
>Mature Secondary Structure 
SGHSKWATIRRKKGAIDAKRGAIFTRIAKEISVAAKEGGGDQEGNPRLRLAVTKAKAAN
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEHHHCC
MPKDNIERAIKKGTGGLEGMVYEECLYECYAPGGVAIMVDVLTDKKSRTTPEIKSILTKL
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEHHCCCCCCCHHHHHHHHHH
GGSLANAGAVSRLFERKGQLTLKADQISEEALFDLALGAGAEDIQVNDGMYVVLTSPSEY
CCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEECCCHH
EAVQSALSSKGLNMEESEIKYIPMTTVEVNEKETAEKVMKLIENLEANDDVQGVSSNFEL
HHHHHHHHHCCCCCCCCCEEEECEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GEGVELD
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA