Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

Click here to switch to the map view.

The map label for this gene is 183219480

Identifier: 183219480

GI number: 183219480

Start: 52407

End: 53330

Strand: Reverse

Name: 183219480

Synonym: LEPBI_I0053

Alternate gene names: NA

Gene position: 53330-52407 (Counterclockwise)

Preceding gene: 183219481

Following gene: 183219479

Centisome position: 1.48

GC content: 33.98

Gene sequence:

>924_bases
TTGGAAAATATCTTTTTAGGATTAAGACAAAGAGTTGTCATCACGAAGTTTTCACAAACGGTCCAGGAATATGTAAAATC
CTCTAACCCAGATATCATTCTTATGGGATTAACTTTTAAAGATAAAAAAGAATTAGAATTCATTTTAGAACTACGTCGTG
ATGTGATCACTCATAACATTCCCATTCTTGCGATGATTCCAAAAGAAGATACAAACTTCATCGCAAATCATAAAAAACTC
GGTTTCACCGATTACATGATAAAACCTCTCGCCAAACAGGCACTACTTGATAGAATTCATTCTCATATTGAAGAATATAA
ATTTAGTGAATCTTCCAAAACCAGAGATAATGTATCGTTTGTGGTTGTGGACAGGGGACATGGTCGAGTTTTATTCCAAT
GCCGAGCCAATTTGAAACGATATGTGTTTCCAGAATTTAAAAAAATATTCACTCTCAATTTTTTGAAATCCATTCATGCA
GAAAGAATTTGTTTTGATGTTCGTGTTGTACCTGAACTAGGAAAAGAAGAAGTTGAAGTATTTGAAAGAGTGATGAAAAT
TTTTCAAAACCAAGACAAAATCATTTTCATCGCTGGGCGGCATATGGGTGCATTTATCGAACATGCAACGGACGATGAAA
AAATGTTGGTGTTCATGGCTCCAAACGAATTTGACGAATACGTCAAGATGGAAGAGTTAAAAAAAGAAGAACAACGTAAG
AAAGAGAAAAAAGAAAAATTTGCTAAGGATACCAATAAAGAACCATCACAAAATACAACGGTTTCTCCAACCAATTTAGG
TGATGTCAAAATAGAAATAAATTCGAATCCAGACTCCAATCCTTCTCTGACAAACGAAGCTTTGAAGACTGATCCTATGC
AAACAAATCCAACTGAAACGAAATCAAGTGAAGAAAATACATAA

Upstream 100 bases:

>100_bases
GTCGGGAACTTGTTTTTAGTCGCATCCGAAGAAGGACTCATTTAAAGTTTTTATGCATTTTATCATGACCATCGAAAATG
ATCCAAATTCAGCTCAGGAT

Downstream 100 bases:

>100_bases
CTAGTTGATAGTCCTGAAGAGATAGAATCATAATCTTCCAATCAAAATACAGTATCCATCCAAGCGAAAAATAACAAATT
CAAACCGATAGAAATTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MENIFLGLRQRVVITKFSQTVQEYVKSSNPDIILMGLTFKDKKELEFILELRRDVITHNIPILAMIPKEDTNFIANHKKL
GFTDYMIKPLAKQALLDRIHSHIEEYKFSESSKTRDNVSFVVVDRGHGRVLFQCRANLKRYVFPEFKKIFTLNFLKSIHA
ERICFDVRVVPELGKEEVEVFERVMKIFQNQDKIIFIAGRHMGAFIEHATDDEKMLVFMAPNEFDEYVKMEELKKEEQRK
KEKKEKFAKDTNKEPSQNTTVSPTNLGDVKIEINSNPDSNPSLTNEALKTDPMQTNPTETKSSEENT

Sequences:

>Translated_307_residues
MENIFLGLRQRVVITKFSQTVQEYVKSSNPDIILMGLTFKDKKELEFILELRRDVITHNIPILAMIPKEDTNFIANHKKL
GFTDYMIKPLAKQALLDRIHSHIEEYKFSESSKTRDNVSFVVVDRGHGRVLFQCRANLKRYVFPEFKKIFTLNFLKSIHA
ERICFDVRVVPELGKEEVEVFERVMKIFQNQDKIIFIAGRHMGAFIEHATDDEKMLVFMAPNEFDEYVKMEELKKEEQRK
KEKKEKFAKDTNKEPSQNTTVSPTNLGDVKIEINSNPDSNPSLTNEALKTDPMQTNPTETKSSEENT
>Mature_307_residues
MENIFLGLRQRVVITKFSQTVQEYVKSSNPDIILMGLTFKDKKELEFILELRRDVITHNIPILAMIPKEDTNFIANHKKL
GFTDYMIKPLAKQALLDRIHSHIEEYKFSESSKTRDNVSFVVVDRGHGRVLFQCRANLKRYVFPEFKKIFTLNFLKSIHA
ERICFDVRVVPELGKEEVEVFERVMKIFQNQDKIIFIAGRHMGAFIEHATDDEKMLVFMAPNEFDEYVKMEELKKEEQRK
KEKKEKFAKDTNKEPSQNTTVSPTNLGDVKIEINSNPDSNPSLTNEALKTDPMQTNPTETKSSEENT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35768; Mature: 35768

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENIFLGLRQRVVITKFSQTVQEYVKSSNPDIILMGLTFKDKKELEFILELRRDVITHNI
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCC
PILAMIPKEDTNFIANHKKLGFTDYMIKPLAKQALLDRIHSHIEEYKFSESSKTRDNVSF
CEEEEECCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE
VVVDRGHGRVLFQCRANLKRYVFPEFKKIFTLNFLKSIHAERICFDVRVVPELGKEEVEV
EEEECCCCEEEEEEHHCHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHH
FERVMKIFQNQDKIIFIAGRHMGAFIEHATDDEKMLVFMAPNEFDEYVKMEELKKEEQRK
HHHHHHHHCCCCCEEEEECCCHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
KEKKEKFAKDTNKEPSQNTTVSPTNLGDVKIEINSNPDSNPSLTNEALKTDPMQTNPTET
HHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCC
KSSEENT
CCCCCCC
>Mature Secondary Structure
MENIFLGLRQRVVITKFSQTVQEYVKSSNPDIILMGLTFKDKKELEFILELRRDVITHNI
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCC
PILAMIPKEDTNFIANHKKLGFTDYMIKPLAKQALLDRIHSHIEEYKFSESSKTRDNVSF
CEEEEECCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE
VVVDRGHGRVLFQCRANLKRYVFPEFKKIFTLNFLKSIHAERICFDVRVVPELGKEEVEV
EEEECCCCEEEEEEHHCHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHH
FERVMKIFQNQDKIIFIAGRHMGAFIEHATDDEKMLVFMAPNEFDEYVKMEELKKEEQRK
HHHHHHHHCCCCCEEEEECCCHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
KEKKEKFAKDTNKEPSQNTTVSPTNLGDVKIEINSNPDSNPSLTNEALKTDPMQTNPTET
HHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCC
KSSEENT
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA