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The map label for this gene is fdxB [H]

Identifier: 182677534

GI number: 182677534

Start: 594649

End: 594969

Strand: Direct

Name: fdxB [H]

Synonym: Bind_0539

Alternate gene names: 182677534

Gene position: 594649-594969 (Clockwise)

Preceding gene: 182677533

Following gene: 182677537

Centisome position: 14.26

GC content: 55.14

Gene sequence:

>321_bases
ATGACCAAAATGACTTTCATTACCTTCGATGGCACCTCCATACCGGTCGAGGCCGAGAATGGTGAAATCCTCATGCGCGT
CGGCCAGCGCTGTGAAATCCCCGGCATTTTGGGCGAATGCGGCGGCACCTGCAGTTGCGGTTCCTGTCATGTCTATATCG
ATGAGAGCTGGCGCGATCGTGTGCCGCCGGTCAAGGAGCTGGAGCAGATGATGATCGACAGCCTGATGACCAAACAGGAT
AATAGCCGTTTGACCTGCATGATCCTCGTGGCGCCCGAGCTTGATGGGTTGATCCTCCATTTGCCGAATCCCAATCTGTG
A

Upstream 100 bases:

>100_bases
CTCCGTGTCAGTGTCGATATCGATCCGCAAAGCTTTCTCTGACTTTGTTGGATCGGCCAGTTCCTTGCATCCGCAAGCCT
GAACCTAGTGAGGCGGCGGC

Downstream 100 bases:

>100_bases
ATTTGATAGTCCAGATGATCGCGTGGTTGCTTGGCGAATGTATGCGTGAGTGACCAGCCCACGGAATGTCCGTGCTGATA
AGGTTGCCAGCCATTCCGCG

Product: ferredoxin

Products: NA

Alternate protein names: FdII [H]

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MTKMTFITFDGTSIPVEAENGEILMRVGQRCEIPGILGECGGTCSCGSCHVYIDESWRDRVPPVKELEQMMIDSLMTKQD
NSRLTCMILVAPELDGLILHLPNPNL

Sequences:

>Translated_106_residues
MTKMTFITFDGTSIPVEAENGEILMRVGQRCEIPGILGECGGTCSCGSCHVYIDESWRDRVPPVKELEQMMIDSLMTKQD
NSRLTCMILVAPELDGLILHLPNPNL
>Mature_105_residues
TKMTFITFDGTSIPVEAENGEILMRVGQRCEIPGILGECGGTCSCGSCHVYIDESWRDRVPPVKELEQMMIDSLMTKQDN
SRLTCMILVAPELDGLILHLPNPNL

Specific function: Unknown

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI72534754, Length=103, Percent_Identity=34.9514563106796, Blast_Score=71, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17544202, Length=99, Percent_Identity=34.3434343434343, Blast_Score=71, Evalue=9e-14,
Organism=Saccharomyces cerevisiae, GI6325004, Length=100, Percent_Identity=34, Blast_Score=68, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 11756; Mature: 11625

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.7 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
12.3 %Cys+Met (Translated Protein)
5.7 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
11.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKMTFITFDGTSIPVEAENGEILMRVGQRCEIPGILGECGGTCSCGSCHVYIDESWRDR
CCEEEEEEECCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
VPPVKELEQMMIDSLMTKQDNSRLTCMILVAPELDGLILHLPNPNL
CCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEECCCCCC
>Mature Secondary Structure 
TKMTFITFDGTSIPVEAENGEILMRVGQRCEIPGILGECGGTCSCGSCHVYIDESWRDR
CEEEEEEECCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
VPPVKELEQMMIDSLMTKQDNSRLTCMILVAPELDGLILHLPNPNL
CCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7751304; 11259647 [H]