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The map label for this gene is yfgC [C]

Identifier: 182682587

GI number: 182682587

Start: 2333653

End: 2335317

Strand: Reverse

Name: yfgC [C]

Synonym: XfasM23_2075

Alternate gene names: 182682587

Gene position: 2335317-2333653 (Counterclockwise)

Preceding gene: 182682590

Following gene: 182682586

Centisome position: 92.1

GC content: 54.29

Gene sequence:

>1665_bases
GTGACCTCCCCAGAATTTCGCGACAGGAGCTTCACTTTGCGCCGACTATCACTTGCTATTGCCACTGCTCTCGTATTGCC
TCTGGGTGGTATTGGTGTCAATGCTCAGGAAAGCCGCTTACCTGACATTGGTTCCTCGGCGGGGCAATTACTGACTCCGG
CACGTCAGGCCGAATATGGCAAGTTGATGATGGCTGAGTTACGTAACTACGGCTATGTGTTGGAAGACCCGTTACTACAG
GGGTGGTTGCAGAGCATAGGAGAACATTTGGCGGCTAACAGTGATCAACCGCACCAACTATTTACCTTTGTATTGTTAAA
AGAACGTCAAATTAATGCGTTTGCCACATTGGGCGGTTATGTAGCGGTGAATTCCGGCCTGTTGCTGACCGCTGAGCGTG
AGGATGAGGTTGCAGCCGTGCTCTCCCACGAGATCGCGCACATTACTCAGAAGCATGTGCTGCGTAGCGTTGAGCGTGCA
CAGCGTGATCAGATTCCGATTCTGCTAGGGATGCTGGCGGCTGTGATCGCCGCACAGCACGTTGGCGGTAATTCAAGTGG
TGATGCGACGATGGCTGGTATTACCAGTGCCATGGGACTCATGCAGCAGCGCCAGATCAATTACACCCGTTCCAACGAAG
CTGAAGCAGATCGTCTTGGAATTCACACCTTGGCGCGTAGTGGGTATGACTTAGAGGCGATGGCTGGCTTTTTCGAGAGA
ATGTCGCTGGTGACACGCGGTAATTCTGGCGGTGATCAGGCGCCGGACTATTTACAGACCCATCCTGTGACCGTGACCCG
CATCAGCGAGGCGAAGGCACGTGCTGAGCAACTCAAGAAACAAAAGGGACTCACGGGGGGCGAGGTTGACCTAATGTCCC
GGGAGCGTTTGAATTTGCATCATGTTTTGCCTGGTGTTCCTGCTAATCCGTTGTTGCCAAAAGTTCTACAGCCAGCGTAT
AGCGAGTTATCTCGTGGGCCTAGTGGTCAGTTCGGTTGGGCCAAAGAGCGCTTACGCGTACTGAGTGCGAAATCCCCAGA
GAGTGCGCTGCGTGAGTATGAAGCCCTGCGTCGCAACACAAAGGGGGGATTGAATGATTTTCAGCGCTATGGGATGGCGT
TGGCCAAGTTCCGTAATGGCAGCAATCTGGACGAGGTCATGCATGAATTCCGTACATTGCTTGAGGTACACCCTGACAAT
GTCTGGCTTGCTTCGGCATTGGCGCAGACCCAAGCGCGGGCTGGACAGCGTCACGAGGCTGGTGAACGTTTCGATGCCTT
GTTGCGGCGCTTGCCTGGGCAGCGTGCAGTGGTGCTCATGTATGCGGAGATGCTTAACGAAGGCGGTAACCTTCAGGATG
GTAAGCGTGCTCAGGCGTTGTTATTGCCGTTACTGCGTCAGTTGTCTGAGGATGCGTTATTTCAACAAACTTTCGCGCGC
TCCTGCGAGTTGGCCGGTGCCACTGCACGCGCCAGTGAGGCCTATGCGGAAGCCGCGTTTCTGAACGGACGTCCGGAGCA
GGCATTGATTCAGTTGCAGGCGTTGAAGAAGAAGAATCTGGATTATGTGACACGTGCGCGAGTGGATGCGCGTATTGCGG
CGATTACTCCAGCGGTGCTGGAAATGCGTCGTCAGGGTATCCGCGATCCGGATTTGGATCGATGA

Upstream 100 bases:

>100_bases
TCATTAGGAAACTCCGTGTCGATTTTGAGGTCCAATGGTAACCGATGCCCCGCATGTCGAAGGTGGCGGTTGCAACATTT
AAACTGGTGACCTCCCCCTG

Downstream 100 bases:

>100_bases
TCTCTGTGTGTCATATCAGCCATATTTTTGTCATGAATTTGTAGTTTACTGGCGAACATCCTAAGTAAGGCGGTGTCTGA
GCGTGCAAAAACGCGTCTTG

Product: peptidase M48 Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 554; Mature: 553

Protein sequence:

>554_residues
MTSPEFRDRSFTLRRLSLAIATALVLPLGGIGVNAQESRLPDIGSSAGQLLTPARQAEYGKLMMAELRNYGYVLEDPLLQ
GWLQSIGEHLAANSDQPHQLFTFVLLKERQINAFATLGGYVAVNSGLLLTAEREDEVAAVLSHEIAHITQKHVLRSVERA
QRDQIPILLGMLAAVIAAQHVGGNSSGDATMAGITSAMGLMQQRQINYTRSNEAEADRLGIHTLARSGYDLEAMAGFFER
MSLVTRGNSGGDQAPDYLQTHPVTVTRISEAKARAEQLKKQKGLTGGEVDLMSRERLNLHHVLPGVPANPLLPKVLQPAY
SELSRGPSGQFGWAKERLRVLSAKSPESALREYEALRRNTKGGLNDFQRYGMALAKFRNGSNLDEVMHEFRTLLEVHPDN
VWLASALAQTQARAGQRHEAGERFDALLRRLPGQRAVVLMYAEMLNEGGNLQDGKRAQALLLPLLRQLSEDALFQQTFAR
SCELAGATARASEAYAEAAFLNGRPEQALIQLQALKKKNLDYVTRARVDARIAAITPAVLEMRRQGIRDPDLDR

Sequences:

>Translated_554_residues
MTSPEFRDRSFTLRRLSLAIATALVLPLGGIGVNAQESRLPDIGSSAGQLLTPARQAEYGKLMMAELRNYGYVLEDPLLQ
GWLQSIGEHLAANSDQPHQLFTFVLLKERQINAFATLGGYVAVNSGLLLTAEREDEVAAVLSHEIAHITQKHVLRSVERA
QRDQIPILLGMLAAVIAAQHVGGNSSGDATMAGITSAMGLMQQRQINYTRSNEAEADRLGIHTLARSGYDLEAMAGFFER
MSLVTRGNSGGDQAPDYLQTHPVTVTRISEAKARAEQLKKQKGLTGGEVDLMSRERLNLHHVLPGVPANPLLPKVLQPAY
SELSRGPSGQFGWAKERLRVLSAKSPESALREYEALRRNTKGGLNDFQRYGMALAKFRNGSNLDEVMHEFRTLLEVHPDN
VWLASALAQTQARAGQRHEAGERFDALLRRLPGQRAVVLMYAEMLNEGGNLQDGKRAQALLLPLLRQLSEDALFQQTFAR
SCELAGATARASEAYAEAAFLNGRPEQALIQLQALKKKNLDYVTRARVDARIAAITPAVLEMRRQGIRDPDLDR
>Mature_553_residues
TSPEFRDRSFTLRRLSLAIATALVLPLGGIGVNAQESRLPDIGSSAGQLLTPARQAEYGKLMMAELRNYGYVLEDPLLQG
WLQSIGEHLAANSDQPHQLFTFVLLKERQINAFATLGGYVAVNSGLLLTAEREDEVAAVLSHEIAHITQKHVLRSVERAQ
RDQIPILLGMLAAVIAAQHVGGNSSGDATMAGITSAMGLMQQRQINYTRSNEAEADRLGIHTLARSGYDLEAMAGFFERM
SLVTRGNSGGDQAPDYLQTHPVTVTRISEAKARAEQLKKQKGLTGGEVDLMSRERLNLHHVLPGVPANPLLPKVLQPAYS
ELSRGPSGQFGWAKERLRVLSAKSPESALREYEALRRNTKGGLNDFQRYGMALAKFRNGSNLDEVMHEFRTLLEVHPDNV
WLASALAQTQARAGQRHEAGERFDALLRRLPGQRAVVLMYAEMLNEGGNLQDGKRAQALLLPLLRQLSEDALFQQTFARS
CELAGATARASEAYAEAAFLNGRPEQALIQLQALKKKNLDYVTRARVDARIAAITPAVLEMRRQGIRDPDLDR

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=240, Percent_Identity=35.4166666666667, Blast_Score=160, Evalue=3e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 60945; Mature: 60814

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPEFRDRSFTLRRLSLAIATALVLPLGGIGVNAQESRLPDIGSSAGQLLTPARQAEYG
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHH
KLMMAELRNYGYVLEDPLLQGWLQSIGEHLAANSDQPHQLFTFVLLKERQINAFATLGGY
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
VAVNSGLLLTAEREDEVAAVLSHEIAHITQKHVLRSVERAQRDQIPILLGMLAAVIAAQH
EEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VGGNSSGDATMAGITSAMGLMQQRQINYTRSNEAEADRLGIHTLARSGYDLEAMAGFFER
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
MSLVTRGNSGGDQAPDYLQTHPVTVTRISEAKARAEQLKKQKGLTGGEVDLMSRERLNLH
HHHHHCCCCCCCCCCCHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCCCEEHHHHHHCCHH
HVLPGVPANPLLPKVLQPAYSELSRGPSGQFGWAKERLRVLSAKSPESALREYEALRRNT
HHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCC
KGGLNDFQRYGMALAKFRNGSNLDEVMHEFRTLLEVHPDNVWLASALAQTQARAGQRHEA
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHH
GERFDALLRRLPGQRAVVLMYAEMLNEGGNLQDGKRAQALLLPLLRQLSEDALFQQTFAR
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SCELAGATARASEAYAEAAFLNGRPEQALIQLQALKKKNLDYVTRARVDARIAAITPAVL
HHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
EMRRQGIRDPDLDR
HHHHCCCCCCCCCC
>Mature Secondary Structure 
TSPEFRDRSFTLRRLSLAIATALVLPLGGIGVNAQESRLPDIGSSAGQLLTPARQAEYG
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHH
KLMMAELRNYGYVLEDPLLQGWLQSIGEHLAANSDQPHQLFTFVLLKERQINAFATLGGY
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
VAVNSGLLLTAEREDEVAAVLSHEIAHITQKHVLRSVERAQRDQIPILLGMLAAVIAAQH
EEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VGGNSSGDATMAGITSAMGLMQQRQINYTRSNEAEADRLGIHTLARSGYDLEAMAGFFER
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
MSLVTRGNSGGDQAPDYLQTHPVTVTRISEAKARAEQLKKQKGLTGGEVDLMSRERLNLH
HHHHHCCCCCCCCCCCHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCCCEEHHHHHHCCHH
HVLPGVPANPLLPKVLQPAYSELSRGPSGQFGWAKERLRVLSAKSPESALREYEALRRNT
HHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCC
KGGLNDFQRYGMALAKFRNGSNLDEVMHEFRTLLEVHPDNVWLASALAQTQARAGQRHEA
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHH
GERFDALLRRLPGQRAVVLMYAEMLNEGGNLQDGKRAQALLLPLLRQLSEDALFQQTFAR
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SCELAGATARASEAYAEAAFLNGRPEQALIQLQALKKKNLDYVTRARVDARIAAITPAVL
HHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
EMRRQGIRDPDLDR
HHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]