Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682590
Identifier: 182682590
GI number: 182682590
Start: 2337727
End: 2338329
Strand: Reverse
Name: 182682590
Synonym: XfasM23_2078
Alternate gene names: NA
Gene position: 2338329-2337727 (Counterclockwise)
Preceding gene: 182682593
Following gene: 182682587
Centisome position: 92.22
GC content: 49.59
Gene sequence:
>603_bases ATGCGCTTTATTTATCCACTCCGAGTGGTTATGCCCGCATTAAATCTGCTTAAACTCGCTAGGCTTGTTGTGTTTACAAG TGTTCGGAGAATGTTTCGTTCTGCCCGTCTGTTTGTGCTTTCGTTTGTTTTCCTTACTCCTTTGGTTGGTTACGTCCAGC CTCAGGTGAAGCCAATCGTTGCTGCATCTCCCCTAACGCCAGCCCAGCAAGCACAATTGGATAAGCAGAATGCGATGATG AATCAGGTAGCGTTAAAGGTTGCGCAATTGGTTGATGCTGGTCAGATTGCAAAGATCTGGGATGGTGCCTCAATGGTGGC TAAGCAAGCGGTAAGGCGTGATGCATTTATTGAGCAGATTCGTGTCGAGCGTGTTCGTCTCGGCACAGTGATCGCGCGCG GTCATGGCGTAGTGACTCGGGTCAAATATGATACCAGCCTGCAGCTGCCCGCTGGCCTTTACTTCAATGTGAGTTTCCCG GTTAAGTTTGCGAATGCGTCGCAGCCGTTGCGTGAGTTAATTTCGTTTCGACAGGACGAAGACAACATTTGGCGCTTATC GGGTTATAGCTTGCGTGCGCCTGGAAATGAAGCCGCATTTTGA
Upstream 100 bases:
>100_bases ATACAATGCTAGGATGTTGAATATTTCCAAACCTTGTGTTGCGTCCTATTGTTGACCCAGCTTGTGCTGCGTATCGTTGA TTGCTTTTGGTGTATGTGTT
Downstream 100 bases:
>100_bases AGTTTTGCTTTATGTTGCTGATGTGGATTGAAGACCGCTGTGCTTTACAGCGTGGATCTTTATAGTGTCATCTTCCTGGC TATGATTGGGCGCCAGGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MRFIYPLRVVMPALNLLKLARLVVFTSVRRMFRSARLFVLSFVFLTPLVGYVQPQVKPIVAASPLTPAQQAQLDKQNAMM NQVALKVAQLVDAGQIAKIWDGASMVAKQAVRRDAFIEQIRVERVRLGTVIARGHGVVTRVKYDTSLQLPAGLYFNVSFP VKFANASQPLRELISFRQDEDNIWRLSGYSLRAPGNEAAF
Sequences:
>Translated_200_residues MRFIYPLRVVMPALNLLKLARLVVFTSVRRMFRSARLFVLSFVFLTPLVGYVQPQVKPIVAASPLTPAQQAQLDKQNAMM NQVALKVAQLVDAGQIAKIWDGASMVAKQAVRRDAFIEQIRVERVRLGTVIARGHGVVTRVKYDTSLQLPAGLYFNVSFP VKFANASQPLRELISFRQDEDNIWRLSGYSLRAPGNEAAF >Mature_200_residues MRFIYPLRVVMPALNLLKLARLVVFTSVRRMFRSARLFVLSFVFLTPLVGYVQPQVKPIVAASPLTPAQQAQLDKQNAMM NQVALKVAQLVDAGQIAKIWDGASMVAKQAVRRDAFIEQIRVERVRLGTVIARGHGVVTRVKYDTSLQLPAGLYFNVSFP VKFANASQPLRELISFRQDEDNIWRLSGYSLRAPGNEAAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22446; Mature: 22446
Theoretical pI: Translated: 11.48; Mature: 11.48
Prosite motif: PS00667 COMPLEX1_ND1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFIYPLRVVMPALNLLKLARLVVFTSVRRMFRSARLFVLSFVFLTPLVGYVQPQVKPIV CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE AASPLTPAQQAQLDKQNAMMNQVALKVAQLVDAGQIAKIWDGASMVAKQAVRRDAFIEQI ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHH RVERVRLGTVIARGHGVVTRVKYDTSLQLPAGLYFNVSFPVKFANASQPLRELISFRQDE HHHHHHHHHHEECCCCEEEEEEECCCCCCCCCEEEEEECCEEECCCHHHHHHHHHHCCCC DNIWRLSGYSLRAPGNEAAF CCEEEECCEEEECCCCCCCC >Mature Secondary Structure MRFIYPLRVVMPALNLLKLARLVVFTSVRRMFRSARLFVLSFVFLTPLVGYVQPQVKPIV CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE AASPLTPAQQAQLDKQNAMMNQVALKVAQLVDAGQIAKIWDGASMVAKQAVRRDAFIEQI ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHH RVERVRLGTVIARGHGVVTRVKYDTSLQLPAGLYFNVSFPVKFANASQPLRELISFRQDE HHHHHHHHHHEECCCCEEEEEEECCCCCCCCCEEEEEECCEEECCCHHHHHHHHHHCCCC DNIWRLSGYSLRAPGNEAAF CCEEEECCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA